Clone BO32525 Report

Search the DGRC for BO32525

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:325
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG8538-RB
Protein status:BO32525.pep: Imported from assembly
Sequenced Size:3139

Clone Sequence Records

BO32525.complete Sequence

3139 bp assembled on 2012-09-18

GenBank Submission: KX798919

> BO32525.complete
GAAGTTATCAGTCGACATGGTGAATGTACCACCGCTGCTCTGCAGCACCC
CCCCGCCCATCGATTTTGGTGAGGAAGACGACGATTCCGGTTTACAATCC
ACCATCCATTTGGACGAGGGTGACGAATACTCAGATTTTGGCTTAGTCAG
CAGCTCGAAAGAACCCCCTCCACCACCAGATCCCGTGGAGGAATTTCGAG
AAAAGCCACCTGATTTGCTGGAAGACAAACAAACCGTCGAGGCATTTAAT
TACCAGGTGAAACAGAAGATGGATTACGATGTTTTCGAGGAAACAGCACC
GCCGACGCCGCCTCCGTTGAGCTTGGAACTGGATGATGAGGAACTGGAGG
AGCATGTGCCCTCCCTTAAGTTGGACAGTCTAAGTCTCTATTCCACGGAA
AGCGTTTCTGCCGCCTCCACACTCTCACCGGTTGCGGAGACTAGTGCAGT
TGCTCCGCCGGCTATGCAAACAACCAAAGCCCATATCCTCAGCCACCAAG
TCACGCTGGAGGATGTGTCCGATGACAGCGACGAGGAGTGCTCGCCAAAG
AAGCCCAAAGAACTATTTATACGCGAGGGAGCTGTGGATTTCTTTGCCAT
AGAGGTATTGGCCACTCCAACCCTACCATATGGAGAAGGCTTTTCGGAGG
AGAATGTGGATACAGGGAAAGGAGAATACGTAGAGAATACCTCCCAGCCA
GAAGAAAGCTTTAGAAGTTTGGAAGCCCAGGAGGAAAGTTCAAATACCTT
AGAAAAGCCTATGGAAAATCAAAGCCGTGGCTTATCAAATCCTCCAAATC
AGGAGGAATCCCCTCACCAATGGGGTGAACCAGCAAATAGTGATACATAT
TCATTTACAAATCTTGATGCGACGCCAAAAGACTTAGTACACAAAGAAAT
TGTTCCCGAAATGCAAGAGCAAGAAGATGATGATGACTTCGGTGACTTTG
CGGATTTCTCAGCAGCAGAACCCCAACTAGAAATCACGGAGAATTCAACG
TCTGCCTTTGAGACACCTTCCTTAGCAATCAATTCCCGAACGGAATCTCA
ACCTCTAGAGGTTAAGACGGCTCCTAGCACAGAAGAATCCTCTAAGTTAC
CTCCTGCAGAGACCGATGATGGCTTCGATGATTTTCAGGAGTTTGCCACT
CCTGCGAATGGAAACCACGGTCAAAGCGAAGACGACGATGATTTTGGCGA
CTTCGCCGCGCCCGTAGTGACTCCTGTTTCTGTACCTCCGCCACCGCCGC
CAGCTGCTGTCCATCTGAGCATAGATGAAAGGGTTAAGCCAGTCCTTGAT
ATGATGTTTCCACAACCAACGGAACTGGACAGCAAAAGTATGGACAATCG
CAGGCCTTTGGCTCAGTGCCAGCGATTCAATTTTGGTGCCATAGAGCATG
CCCAAGCCCTTGATTACCAATGGAGCAGCTCGGAAATGAGACACGCCCTT
GTTCGATCGCTGGGCATCGATTCAAGGAATATACTCTTCGGCGACAAGTG
GAACTCATCGATGCCACGTTTTGCTGCCAACCTGAGCTTTGATCCGCTGA
AGCCGCTGAAACCTCAATCAACCGGCGCCGCAAGCAGCCTGGAGCCCATT
TCCAATTCCACCAGCTACCAGGGATTGGAAAACGCCGCCGCAACAACGGC
GAGCCAAACTGAAACGCGGACTGGCCCGTCTCATGGGGAAGGCTCCACCG
GCTCCTGTTCCGCCAGCAATTCCGACGGCGAAGAGCGACCGAGTCATAGC
CACCAGCCAACTGCAGTCCCCAGCCCCGAATCGAACCATATTGAATCCAC
AGCAGCGGCATCAGCAGCAGCTGTTGCTGCAGCAGCAGCGACGCTACCGA
CTACTCTATCAGCAGACAGCCCTGCCCACAAACTCAACGGCGGTGAGCAG
CTGCATCAGCAGCGGTCGGAGCCGGAGCAGTTTGATTTGAGGACCACTCC
TCCGGCCGCAGCGCCAGCTCAGGAGGAGATCGTGGGCAGCTCGATGGCCA
GCTATTCGGTGCCGCTGAAGGAGACCCATATCTATACGCCCTCCAAATCG
GATACGGCGGTGGCCAAGACCACCACACTAGCGCCCATTGATTTCGACTA
CGAGATGGCTGCGACGGGCATTATCATCGATGAGACGGTGGTGAAGAAGG
AGTATCGCGACGTGGAGTACAAACCCCCATTTGGTCTGGATTCGCCCAGC
AAACTGAGTGGCAATGGAGCTGCCAGCAGCTTTCAGTTGCCACCACAGAC
GACGGAAGATGACGACTTTAGTGATTTTCAATCTATGCCGGCGCCAAGGT
CTCGAATTGATACACCCACTTTTGGCGAACAGATGATCCTTAGTCCGGCT
ATTCTGCTGCCCCAAGCCATTCCGCTGGCAAAGAAGCCAGCTGCAACTAT
TGAATGGGGCGACAATGCTCTGTCTAGCATAAATGCCGAGGAAATGGCCA
GGATAGAGGAGTTGTTCTCCTCGCAGGCCAAACCGCTCACCATAAGCGCT
TCGGTGGCCAAGAAACCAGCTCCTTCCACGCCAGCTCAGTCTCAGCCTCA
AGAAGACGATGAATGGTCGGACTTTGTCTCTGTTCCAGTCACCCAACAGC
AACCGCATCATCAGCAAAACGCAATTGCTAACAACAATAATATAGTCAAC
AGCAACGCTAGGAAACCAGCTGCTCCCAAAGAAGATGATTGGTCGGATTT
TGTGAGCAGTACTCCGCCAGCACGACCGGCTCCACAATTCAATTCCGGTG
CGTGGCAGAGCGCTAATTTCTACAACAATCCCTTGAGTTTGTACCAGGCG
CAGCAGCAGCTGCAGCAACAGCCTCATAGCAATCTAGTGCCCAAGGGCAG
CACCAGCAGCAGCAATAACAACAATGTGCCAGCCATTCCACAGCAAATAC
ACATCATGCACGACTTCTCGACTGCACCCGTGTCTGGAGGATTGGGTGTG
GGTGCCACCTACCAGCAGCAGCATCAGCGGCAGCAGTTCCAAATCGGCAA
CGCCAAGGTGGCTCCACGCATCTCCCTGATCCCCGATCTCAGCTTCGTTG
CACCGGCCTTGCCCACAAATGCTGGTGCGTTCATGGGTGCGCTACCGAAA
CCCACTTTCGGTGGCAAGAAAGCAAGCTTTCTAGACCAT

BO32525.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:11:59
Subject Length Description Subject Range Query Range Score Percent Strand
Afti-RB 3108 CG8538-PB 1..3105 17..3121 15525 100 Plus
Afti-RD 3108 CG8538-PD 1..3105 17..3121 15525 100 Plus
Afti-RC 3108 CG8538-PC 1..3105 17..3121 15525 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:12:00
Subject Length Description Subject Range Query Range Score Percent Strand
Afti-RB 3923 CG8538-RB 409..3513 17..3121 15525 100 Plus
Afti-RD 5111 CG8538-RD 409..3513 17..3121 15525 100 Plus
Afti-RC 4225 CG8538-RC 409..3513 17..3121 15525 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:11:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14321789..14323288 3121..1622 7500 100 Minus
3R 32079331 3R 14324757..14326080 1483..160 6620 100 Minus
3R 32079331 3R 14326137..14326281 161..17 725 100 Minus
3R 32079331 3R 14324559..14324698 1623..1484 700 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:11:58 has no hits.

BO32525.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-18 16:23:24 Download gff for BO32525.complete
Subject Subject Range Query Range Percent Splice Strand
CG8538-RB 402..3506 17..3123 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:03 Download gff for BO32525.complete
Subject Subject Range Query Range Percent Splice Strand
Afti-RC 409..3513 17..3123 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:23:09 Download gff for BO32525.complete
Subject Subject Range Query Range Percent Splice Strand
Afti-RC 409..3513 17..3123 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:23:09 Download gff for BO32525.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14321785..14323287 1623..3123 99 <- Minus
3R 14324560..14324698 1484..1622 100 <- Minus
3R 14324757..14326078 162..1483 100 <- Minus
3R 14326137..14326281 17..161 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:03 Download gff for BO32525.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10147507..10149009 1623..3123 99 <- Minus
arm_3R 10150282..10150420 1484..1622 100 <- Minus
arm_3R 10150479..10151800 162..1483 100 <- Minus
arm_3R 10151859..10152003 17..161 100   Minus

BO32525.pep Sequence

Translation from 16 to 3139

> BO32525.pep
MVNVPPLLCSTPPPIDFGEEDDDSGLQSTIHLDEGDEYSDFGLVSSSKEP
PPPPDPVEEFREKPPDLLEDKQTVEAFNYQVKQKMDYDVFEETAPPTPPP
LSLELDDEELEEHVPSLKLDSLSLYSTESVSAASTLSPVAETSAVAPPAM
QTTKAHILSHQVTLEDVSDDSDEECSPKKPKELFIREGAVDFFAIEVLAT
PTLPYGEGFSEENVDTGKGEYVENTSQPEESFRSLEAQEESSNTLEKPME
NQSRGLSNPPNQEESPHQWGEPANSDTYSFTNLDATPKDLVHKEIVPEMQ
EQEDDDDFGDFADFSAAEPQLEITENSTSAFETPSLAINSRTESQPLEVK
TAPSTEESSKLPPAETDDGFDDFQEFATPANGNHGQSEDDDDFGDFAAPV
VTPVSVPPPPPPAAVHLSIDERVKPVLDMMFPQPTELDSKSMDNRRPLAQ
CQRFNFGAIEHAQALDYQWSSSEMRHALVRSLGIDSRNILFGDKWNSSMP
RFAANLSFDPLKPLKPQSTGAASSLEPISNSTSYQGLENAAATTASQTET
RTGPSHGEGSTGSCSASNSDGEERPSHSHQPTAVPSPESNHIESTAAASA
AAVAAAAATLPTTLSADSPAHKLNGGEQLHQQRSEPEQFDLRTTPPAAAP
AQEEIVGSSMASYSVPLKETHIYTPSKSDTAVAKTTTLAPIDFDYEMAAT
GIIIDETVVKKEYRDVEYKPPFGLDSPSKLSGNGAASSFQLPPQTTEDDD
FSDFQSMPAPRSRIDTPTFGEQMILSPAILLPQAIPLAKKPAATIEWGDN
ALSSINAEEMARIEELFSSQAKPLTISASVAKKPAPSTPAQSQPQEDDEW
SDFVSVPVTQQQPHHQQNAIANNNNIVNSNARKPAAPKEDDWSDFVSSTP
PARPAPQFNSGAWQSANFYNNPLSLYQAQQQLQQQPHSNLVPKGSTSSSN
NNNVPAIPQQIHIMHDFSTAPVSGGLGVGATYQQQHQRQQFQIGNAKVAP
RISLIPDLSFVAPALPTNAGAFMGALPKPTFGGKKASFLDH

BO32525.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:28
Subject Length Description Subject Range Query Range Score Percent Strand
Afti-PB 1035 CG8538-PB 1..1035 1..1035 5386 100 Plus
Afti-PD 1035 CG8538-PD 1..1035 1..1035 5386 100 Plus
Afti-PC 1035 CG8538-PC 1..1035 1..1035 5386 100 Plus