BO32538.complete Sequence
3916 bp assembled on 2012-07-27
GenBank Submission: KX795392
> BO32538.complete
GAAGTTATCAGTCGACATGGGGGAACGTTTCTATAGATGCTGGCCGTTTG
ATAGAAACGGAAAAGTCGAAAACATATATGTAATGGAACATTCCGATCCC
GTGCCTTATCAACAGCTATCGACATTATCGCCGACCACCGCACTATACTC
GAACTTTAACAACTCTTTGGAAGCAGGAACCGCAGAAAGACTACGCCTTA
ATAAAACTGGGTCACAGGTCCACAGCCTATATGTCGGCGACGGTCAAGTG
CAAAATGCTTCTGAACCCTTATCTTTTCCCAGCCACCTTAATCTGTACCA
ATATGTTCGTACCCCGGCAAACTTCACTATTAACAGCCGCAACCGATATA
TTCCGTACTATAACAATCGTTCCTACTCTGCTTCAACAACTGGTTTCCCT
ATAGCCAGTACTCCGCTGATCAGCAGCCATGCGCACATCCAAGACCAACA
AGGTGCAGCGTCTTATCAAACGATTGTTCCGCTTTATCAGACCGCAAGCC
ACTGTGCGCAGCAACATACAACATTGGCATCGGTAGCTCCAATCGTGGAC
AATTCATTCGTTGAAAGCACCACTTGCCCCATGGCCGGCATCACCTCTCA
CAACATCAAAATGAAAATGATTCCTCCCAATGTATTGTTGCCTTGCTCCA
GGCCTACGACAACCGCGGTGACCATCCAAAGGTCAACCGGAGAAGACGGT
GGAGATAAAGAAGGTCATACTTTTGCTAAGATTACGGAGATGAGCGATGC
TGTTACTTTGCAGATCACCAACTTGGACTACTCGCTGGACGAATCACATA
TACGCAGCTTTCTACTTAATCAGCTTAAGCCCATTACGCCAGTTGTGTCA
CTTGTCTTCGAGGGAAGCTCCTATGCCAAAGTCACTGTTCCAGATCTTTA
TTTCGCAAAGCAGGTCGTCTCCAATTTGCACCGCAAGAAGATTGGACACA
AACGCATGCTGGTCAGTTATACTCGAGATTCCTCCCTCACCGAGGTCAAC
ACACTCCGCTGCCAGGTCGCAGGACTTCTAAAGGATGTCCCATTCAACAC
CCTCCCCATGTATAAGTTTAGAGAACTATTTCAGTCCCGCTTCAAAACCT
CTATCAGTGTTTTAGATTTGTACAAAATGCAAGACATATGTACCATTAAC
TCGGATAACAATGAAGAAAAGTTTATCAGCTTAAATCCGGAATTAGTAAA
CACCCTCGATATATCCCCCTTAATGGAAGGACTCCAACATAGTGTTCCTT
ACTGTAGTATTCATTTTAAAAAGGAGCAGCACAAGGGATGGGCCGAGCAG
GAAATCGAGCCACTACCAAACGTCTTCATGAGCATTTCGGAAATTCAGAA
ACTAATTTATCCACTTCTCAAGGTACACACGGGGGATATTCCGGTGGCTA
CCCTTCTTCACTGCGTTAAAGAAGAGCTTAATGTGTCAATAATGGCGAAC
GAAAATGGCGTTAACTTGGAGCATTTGATCTGCTGTGTTCAGGGAATTCA
AGTTCGGGCAAACAATTTTGGAATTAAAATTCTCGGATGGTTAGAAATAA
ACAAAGAAATGCAATCAGGAACTTTTAATGCCAGTTCTAATACATGTAGC
CTGACTGCAAGTGATCGCACAAATTGTGGAAGCTATTTCAAAAACTCAGT
TGCCGATCCGCTTTTCCAAATTTCCCGGGAGGTTATAGAGCTGCTAAAGA
TGTCACCAAAATCAACTATGAAATTCAACCGTTTTATTCCGGCCTACCAC
AATCACTTTGGAAAGCAATGTCGAGTTGCAGACTATGGCTATACAAAGTT
AATCGAATTGTTTGAGGCATTATCAAACGTTGTCCAAATTATGGGAGACG
GCGAAAATCGTCAAATTACGCTATCCCACCGTATTCAAATACGCAGGTTT
ACATCAGACTTATTGCGTGTATTGCGCGCTAATGGTAACAACTCAGTCCT
GCTTTCCCAGTTGCCATTAGTTTTTACACAGACCCAAAATAAAACTTTTG
ATATTACTGATTATGGAGTGTGCGACCTTATAGACATTCTAGACGGCTTG
GTAAGCTCCAACATCGTGACTTTAGGCGCAGCACAGAACGGAAAAGATAT
TCTTATATCAATGCCAAAACGAAAGCAGACAAACAGTGAATTGGAGAAAA
CGTGTGTGTTCGCCGGCGAAATGGTTGAGCTCTTCCAAAACGCTCTTCAG
TACACTATTCTATTTCAGAAGTTTGTACGGTCCTATCATTACCACTTTGC
ATACCAATGTCGTCTCAGTGATTACGGCTTTCTTAAATTGGCCGATCTTC
TAGATGCAATTAATGGTTTGGTGGAAATGAAGTTGACAAGTGATGAGGAC
AAGAAAATAGTTCTCTCCCCACAAGTAGCTAGAAGAGTTTTCGCTGAACA
ATGTGAAAACCTAATTCGCAATGCCACAGGAAACTCATCGCATTGTATGA
AGCTAGAACAGGTGCTGGTATTGCACAAAAAGAAATATGGCTACCAAATT
CAGCCGAAAACTTTGGGAGTCATGGATATGGCTACGGCAGTTGAGCTGTT
GCCTTACGTCGAGCTAAAGAAAAAAGAACAGGCCATTTGGCTCATCTGTC
ACAACAACGATCATGAATTTCGTTTTCTTTGCTATAGGGTGTGTAAGTAT
GTCATGGAAAGGGACCCTTCTGCATCAGTTTGGACAAACGTTAGAGGTGA
AGTTAAGTTAACTAAATCTCAACAATTCGTAAAACCAATTGAAAAAAGCA
TATTGGTTAGGGATTTCAATGCTAAGTATAAAGACCATCTTTCAGAGTCA
GCTCTTTTAGCCATGCGACAAGCGATTGAGGTATATGATGATGGTGGCAT
ACAGTGTATTCGTCTTACCCGTTTCATGAAGTTTATAATTGCCATTGTGC
GTATGCTTGAACAGCGGCCAAGCATGTATCTCTATGAGATCAAGAATGGT
TTAAACTGTGGCCTTAGCACCACTTTTGAATTCGGATTCCCAAATTTATA
TTCAGTGGTTGCAGCACATAAAGACCTATTCAGTATTAACAACGGACCAA
CGCAAGAAAGAAGCGAGGTTTCCATTAATATGAACTGTGAGCTTCGTCAA
AGTTCTTTAAGCAAAGACCAGTGCGTCCTGGAATCCCAGAAGCTAACAAA
TTCCAAACATAGAGCACAACGGAGCTTCCATAGTCACATTGGCGAGCATA
ATGGACTTCCAATCAGTCAGCCCCCCCTGAAACGAAGCGCAACAATCAAT
AATTGTTCAACATTCCAAACATATCATGCTGATACCGACATATTTAATGT
GCCAGCGAATTGTTTACCGCCAAGAACCAACTTATCATTGCCTAATAGTT
TCGGATCATCTCTGGAAAGTGGAAGTTTTTCCAATAGTTACAGCAACAAG
GAAAACTCTATGAAATCTCTTCACTTGTTCAACAGTTCATTTAATTCGTC
TGGCGAGCTAAATGCCAGTCTAGGCGCAGGAGATTTAACAAATATATCTT
TAGGGACAGGTATCGCAGTTGATACATCAAATGAACCATCCGAACTTTGG
CGTAGACGTCAACAAAACTTTAATCGCCCTAATTCATCAAATTTTCGTAA
ATCAGATAATGGAACTGACGGTACTTACACCATTGGAAATTACATCGCAC
CACCAATAGGATCCATTTACGAGCCACTAAAGTATAATGGTCAAGACAAA
GAGAAATTACCCTTTTGGATTGATCCCATTTGGAGCAAAGGATCGGAACA
GCTGAGGCATGACATACTTAACATTCGACTTCCTAAGGCCAGAACAACTA
AAACGTTTTCCAATATACTTTCGCCTTACACCATTTCGAAAAATGAAAAT
TTGAAGCGACAGTTGTTTAGTTTTGATAATCACGATCGTAAAATAGCTGC
AAGCTTTCTAGACCAT
BO32538.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:48:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17018-RC | 3885 | CG17018-PC | 1..3882 | 17..3898 | 19395 | 100 | Plus |
CG17018-RF | 3918 | CG17018-PF | 54..3915 | 37..3898 | 19295 | 100 | Plus |
CG17018-RD | 3918 | CG17018-PD | 54..3915 | 37..3898 | 19295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:48:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17018-RC | 4395 | CG17018-RC | 178..4059 | 17..3898 | 19395 | 100 | Plus |
CG17018-RE | 4815 | CG17018-RE | 596..4459 | 35..3898 | 19305 | 100 | Plus |
CG17018-RF | 4749 | CG17018-RF | 552..4413 | 37..3898 | 19295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:48:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 22365375..22367176 | 1032..2833 | 9010 | 100 | Plus |
2L | 23513712 | 2L | 22363426..22364294 | 33..901 | 4345 | 100 | Plus |
2L | 23513712 | 2L | 22367566..22368176 | 3093..3703 | 3055 | 100 | Plus |
2L | 23513712 | 2L | 22367234..22367497 | 2829..3092 | 1320 | 100 | Plus |
2L | 23513712 | 2L | 22368244..22368440 | 3702..3898 | 970 | 99.5 | Plus |
2L | 23513712 | 2L | 22365193..22365325 | 902..1034 | 665 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:48:16 has no hits.
BO32538.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-27 15:28:17 Download gff for
BO32538.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17018-RC | 174..4055 | 17..3900 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:46 Download gff for
BO32538.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17018-RC | 178..4059 | 17..3900 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:51:37 Download gff for
BO32538.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17018-RC | 178..4059 | 17..3900 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:51:37 Download gff for
BO32538.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22368246..22368440 | 3704..3900 | 98 | | Plus |
2L | 22325827..22325846 | 17..36 | 100 | -> | Plus |
2L | 22363430..22364294 | 37..901 | 100 | -> | Plus |
2L | 22365193..22365324 | 902..1033 | 100 | -> | Plus |
2L | 22365377..22367173 | 1034..2830 | 100 | -> | Plus |
2L | 22367236..22367497 | 2831..3092 | 100 | -> | Plus |
2L | 22367566..22368176 | 3093..3703 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:46 Download gff for
BO32538.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 22325827..22325846 | 17..36 | 100 | -> | Plus |
arm_2L | 22363430..22364294 | 37..901 | 100 | -> | Plus |
arm_2L | 22365193..22365324 | 902..1033 | 100 | -> | Plus |
arm_2L | 22365377..22367173 | 1034..2830 | 100 | -> | Plus |
arm_2L | 22367236..22367497 | 2831..3092 | 100 | -> | Plus |
arm_2L | 22367566..22368176 | 3093..3703 | 100 | -> | Plus |
arm_2L | 22368246..22368440 | 3704..3900 | 98 | | Plus |
BO32538.pep Sequence
Translation from 16 to 3916
> BO32538.pep
MGERFYRCWPFDRNGKVENIYVMEHSDPVPYQQLSTLSPTTALYSNFNNS
LEAGTAERLRLNKTGSQVHSLYVGDGQVQNASEPLSFPSHLNLYQYVRTP
ANFTINSRNRYIPYYNNRSYSASTTGFPIASTPLISSHAHIQDQQGAASY
QTIVPLYQTASHCAQQHTTLASVAPIVDNSFVESTTCPMAGITSHNIKMK
MIPPNVLLPCSRPTTTAVTIQRSTGEDGGDKEGHTFAKITEMSDAVTLQI
TNLDYSLDESHIRSFLLNQLKPITPVVSLVFEGSSYAKVTVPDLYFAKQV
VSNLHRKKIGHKRMLVSYTRDSSLTEVNTLRCQVAGLLKDVPFNTLPMYK
FRELFQSRFKTSISVLDLYKMQDICTINSDNNEEKFISLNPELVNTLDIS
PLMEGLQHSVPYCSIHFKKEQHKGWAEQEIEPLPNVFMSISEIQKLIYPL
LKVHTGDIPVATLLHCVKEELNVSIMANENGVNLEHLICCVQGIQVRANN
FGIKILGWLEINKEMQSGTFNASSNTCSLTASDRTNCGSYFKNSVADPLF
QISREVIELLKMSPKSTMKFNRFIPAYHNHFGKQCRVADYGYTKLIELFE
ALSNVVQIMGDGENRQITLSHRIQIRRFTSDLLRVLRANGNNSVLLSQLP
LVFTQTQNKTFDITDYGVCDLIDILDGLVSSNIVTLGAAQNGKDILISMP
KRKQTNSELEKTCVFAGEMVELFQNALQYTILFQKFVRSYHYHFAYQCRL
SDYGFLKLADLLDAINGLVEMKLTSDEDKKIVLSPQVARRVFAEQCENLI
RNATGNSSHCMKLEQVLVLHKKKYGYQIQPKTLGVMDMATAVELLPYVEL
KKKEQAIWLICHNNDHEFRFLCYRVCKYVMERDPSASVWTNVRGEVKLTK
SQQFVKPIEKSILVRDFNAKYKDHLSESALLAMRQAIEVYDDGGIQCIRL
TRFMKFIIAIVRMLEQRPSMYLYEIKNGLNCGLSTTFEFGFPNLYSVVAA
HKDLFSINNGPTQERSEVSINMNCELRQSSLSKDQCVLESQKLTNSKHRA
QRSFHSHIGEHNGLPISQPPLKRSATINNCSTFQTYHADTDIFNVPANCL
PPRTNLSLPNSFGSSLESGSFSNSYSNKENSMKSLHLFNSSFNSSGELNA
SLGAGDLTNISLGTGIAVDTSNEPSELWRRRQQNFNRPNSSNFRKSDNGT
DGTYTIGNYIAPPIGSIYEPLKYNGQDKEKLPFWIDPIWSKGSEQLRHDI
LNIRLPKARTTKTFSNILSPYTISKNENLKRQLFSFDNHDRKIAASFLDH
BO32538.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17018-PC | 1294 | CG17018-PC | 1..1294 | 1..1294 | 6746 | 100 | Plus |
CG17018-PD | 1305 | CG17018-PD | 19..1305 | 8..1294 | 6707 | 100 | Plus |
CG17018-PF | 1305 | CG17018-PF | 19..1305 | 8..1294 | 6707 | 100 | Plus |
CG17018-PE | 1272 | CG17018-PE | 1..1272 | 23..1294 | 6616 | 100 | Plus |
CG17018-PA | 1272 | CG17018-PA | 1..1272 | 23..1294 | 6616 | 100 | Plus |