Clone BO32538 Report

Search the DGRC for BO32538

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:325
Well:38
Vector:pDNR-Dual
Associated Gene/TranscriptCG17018-RC
Protein status:BO32538.pep: Imported from assembly
Sequenced Size:3916

Clone Sequence Records

BO32538.complete Sequence

3916 bp assembled on 2012-07-27

GenBank Submission: KX795392

> BO32538.complete
GAAGTTATCAGTCGACATGGGGGAACGTTTCTATAGATGCTGGCCGTTTG
ATAGAAACGGAAAAGTCGAAAACATATATGTAATGGAACATTCCGATCCC
GTGCCTTATCAACAGCTATCGACATTATCGCCGACCACCGCACTATACTC
GAACTTTAACAACTCTTTGGAAGCAGGAACCGCAGAAAGACTACGCCTTA
ATAAAACTGGGTCACAGGTCCACAGCCTATATGTCGGCGACGGTCAAGTG
CAAAATGCTTCTGAACCCTTATCTTTTCCCAGCCACCTTAATCTGTACCA
ATATGTTCGTACCCCGGCAAACTTCACTATTAACAGCCGCAACCGATATA
TTCCGTACTATAACAATCGTTCCTACTCTGCTTCAACAACTGGTTTCCCT
ATAGCCAGTACTCCGCTGATCAGCAGCCATGCGCACATCCAAGACCAACA
AGGTGCAGCGTCTTATCAAACGATTGTTCCGCTTTATCAGACCGCAAGCC
ACTGTGCGCAGCAACATACAACATTGGCATCGGTAGCTCCAATCGTGGAC
AATTCATTCGTTGAAAGCACCACTTGCCCCATGGCCGGCATCACCTCTCA
CAACATCAAAATGAAAATGATTCCTCCCAATGTATTGTTGCCTTGCTCCA
GGCCTACGACAACCGCGGTGACCATCCAAAGGTCAACCGGAGAAGACGGT
GGAGATAAAGAAGGTCATACTTTTGCTAAGATTACGGAGATGAGCGATGC
TGTTACTTTGCAGATCACCAACTTGGACTACTCGCTGGACGAATCACATA
TACGCAGCTTTCTACTTAATCAGCTTAAGCCCATTACGCCAGTTGTGTCA
CTTGTCTTCGAGGGAAGCTCCTATGCCAAAGTCACTGTTCCAGATCTTTA
TTTCGCAAAGCAGGTCGTCTCCAATTTGCACCGCAAGAAGATTGGACACA
AACGCATGCTGGTCAGTTATACTCGAGATTCCTCCCTCACCGAGGTCAAC
ACACTCCGCTGCCAGGTCGCAGGACTTCTAAAGGATGTCCCATTCAACAC
CCTCCCCATGTATAAGTTTAGAGAACTATTTCAGTCCCGCTTCAAAACCT
CTATCAGTGTTTTAGATTTGTACAAAATGCAAGACATATGTACCATTAAC
TCGGATAACAATGAAGAAAAGTTTATCAGCTTAAATCCGGAATTAGTAAA
CACCCTCGATATATCCCCCTTAATGGAAGGACTCCAACATAGTGTTCCTT
ACTGTAGTATTCATTTTAAAAAGGAGCAGCACAAGGGATGGGCCGAGCAG
GAAATCGAGCCACTACCAAACGTCTTCATGAGCATTTCGGAAATTCAGAA
ACTAATTTATCCACTTCTCAAGGTACACACGGGGGATATTCCGGTGGCTA
CCCTTCTTCACTGCGTTAAAGAAGAGCTTAATGTGTCAATAATGGCGAAC
GAAAATGGCGTTAACTTGGAGCATTTGATCTGCTGTGTTCAGGGAATTCA
AGTTCGGGCAAACAATTTTGGAATTAAAATTCTCGGATGGTTAGAAATAA
ACAAAGAAATGCAATCAGGAACTTTTAATGCCAGTTCTAATACATGTAGC
CTGACTGCAAGTGATCGCACAAATTGTGGAAGCTATTTCAAAAACTCAGT
TGCCGATCCGCTTTTCCAAATTTCCCGGGAGGTTATAGAGCTGCTAAAGA
TGTCACCAAAATCAACTATGAAATTCAACCGTTTTATTCCGGCCTACCAC
AATCACTTTGGAAAGCAATGTCGAGTTGCAGACTATGGCTATACAAAGTT
AATCGAATTGTTTGAGGCATTATCAAACGTTGTCCAAATTATGGGAGACG
GCGAAAATCGTCAAATTACGCTATCCCACCGTATTCAAATACGCAGGTTT
ACATCAGACTTATTGCGTGTATTGCGCGCTAATGGTAACAACTCAGTCCT
GCTTTCCCAGTTGCCATTAGTTTTTACACAGACCCAAAATAAAACTTTTG
ATATTACTGATTATGGAGTGTGCGACCTTATAGACATTCTAGACGGCTTG
GTAAGCTCCAACATCGTGACTTTAGGCGCAGCACAGAACGGAAAAGATAT
TCTTATATCAATGCCAAAACGAAAGCAGACAAACAGTGAATTGGAGAAAA
CGTGTGTGTTCGCCGGCGAAATGGTTGAGCTCTTCCAAAACGCTCTTCAG
TACACTATTCTATTTCAGAAGTTTGTACGGTCCTATCATTACCACTTTGC
ATACCAATGTCGTCTCAGTGATTACGGCTTTCTTAAATTGGCCGATCTTC
TAGATGCAATTAATGGTTTGGTGGAAATGAAGTTGACAAGTGATGAGGAC
AAGAAAATAGTTCTCTCCCCACAAGTAGCTAGAAGAGTTTTCGCTGAACA
ATGTGAAAACCTAATTCGCAATGCCACAGGAAACTCATCGCATTGTATGA
AGCTAGAACAGGTGCTGGTATTGCACAAAAAGAAATATGGCTACCAAATT
CAGCCGAAAACTTTGGGAGTCATGGATATGGCTACGGCAGTTGAGCTGTT
GCCTTACGTCGAGCTAAAGAAAAAAGAACAGGCCATTTGGCTCATCTGTC
ACAACAACGATCATGAATTTCGTTTTCTTTGCTATAGGGTGTGTAAGTAT
GTCATGGAAAGGGACCCTTCTGCATCAGTTTGGACAAACGTTAGAGGTGA
AGTTAAGTTAACTAAATCTCAACAATTCGTAAAACCAATTGAAAAAAGCA
TATTGGTTAGGGATTTCAATGCTAAGTATAAAGACCATCTTTCAGAGTCA
GCTCTTTTAGCCATGCGACAAGCGATTGAGGTATATGATGATGGTGGCAT
ACAGTGTATTCGTCTTACCCGTTTCATGAAGTTTATAATTGCCATTGTGC
GTATGCTTGAACAGCGGCCAAGCATGTATCTCTATGAGATCAAGAATGGT
TTAAACTGTGGCCTTAGCACCACTTTTGAATTCGGATTCCCAAATTTATA
TTCAGTGGTTGCAGCACATAAAGACCTATTCAGTATTAACAACGGACCAA
CGCAAGAAAGAAGCGAGGTTTCCATTAATATGAACTGTGAGCTTCGTCAA
AGTTCTTTAAGCAAAGACCAGTGCGTCCTGGAATCCCAGAAGCTAACAAA
TTCCAAACATAGAGCACAACGGAGCTTCCATAGTCACATTGGCGAGCATA
ATGGACTTCCAATCAGTCAGCCCCCCCTGAAACGAAGCGCAACAATCAAT
AATTGTTCAACATTCCAAACATATCATGCTGATACCGACATATTTAATGT
GCCAGCGAATTGTTTACCGCCAAGAACCAACTTATCATTGCCTAATAGTT
TCGGATCATCTCTGGAAAGTGGAAGTTTTTCCAATAGTTACAGCAACAAG
GAAAACTCTATGAAATCTCTTCACTTGTTCAACAGTTCATTTAATTCGTC
TGGCGAGCTAAATGCCAGTCTAGGCGCAGGAGATTTAACAAATATATCTT
TAGGGACAGGTATCGCAGTTGATACATCAAATGAACCATCCGAACTTTGG
CGTAGACGTCAACAAAACTTTAATCGCCCTAATTCATCAAATTTTCGTAA
ATCAGATAATGGAACTGACGGTACTTACACCATTGGAAATTACATCGCAC
CACCAATAGGATCCATTTACGAGCCACTAAAGTATAATGGTCAAGACAAA
GAGAAATTACCCTTTTGGATTGATCCCATTTGGAGCAAAGGATCGGAACA
GCTGAGGCATGACATACTTAACATTCGACTTCCTAAGGCCAGAACAACTA
AAACGTTTTCCAATATACTTTCGCCTTACACCATTTCGAAAAATGAAAAT
TTGAAGCGACAGTTGTTTAGTTTTGATAATCACGATCGTAAAATAGCTGC
AAGCTTTCTAGACCAT

BO32538.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:48:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG17018-RC 3885 CG17018-PC 1..3882 17..3898 19395 100 Plus
CG17018-RF 3918 CG17018-PF 54..3915 37..3898 19295 100 Plus
CG17018-RD 3918 CG17018-PD 54..3915 37..3898 19295 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:48:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG17018-RC 4395 CG17018-RC 178..4059 17..3898 19395 100 Plus
CG17018-RE 4815 CG17018-RE 596..4459 35..3898 19305 100 Plus
CG17018-RF 4749 CG17018-RF 552..4413 37..3898 19295 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:48:15
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22365375..22367176 1032..2833 9010 100 Plus
2L 23513712 2L 22363426..22364294 33..901 4345 100 Plus
2L 23513712 2L 22367566..22368176 3093..3703 3055 100 Plus
2L 23513712 2L 22367234..22367497 2829..3092 1320 100 Plus
2L 23513712 2L 22368244..22368440 3702..3898 970 99.5 Plus
2L 23513712 2L 22365193..22365325 902..1034 665 100 Plus
Blast to na_te.dros performed on 2014-11-28 11:48:16 has no hits.

BO32538.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-27 15:28:17 Download gff for BO32538.complete
Subject Subject Range Query Range Percent Splice Strand
CG17018-RC 174..4055 17..3900 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:46 Download gff for BO32538.complete
Subject Subject Range Query Range Percent Splice Strand
CG17018-RC 178..4059 17..3900 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:51:37 Download gff for BO32538.complete
Subject Subject Range Query Range Percent Splice Strand
CG17018-RC 178..4059 17..3900 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:51:37 Download gff for BO32538.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22368246..22368440 3704..3900 98   Plus
2L 22325827..22325846 17..36 100 -> Plus
2L 22363430..22364294 37..901 100 -> Plus
2L 22365193..22365324 902..1033 100 -> Plus
2L 22365377..22367173 1034..2830 100 -> Plus
2L 22367236..22367497 2831..3092 100 -> Plus
2L 22367566..22368176 3093..3703 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:46 Download gff for BO32538.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22325827..22325846 17..36 100 -> Plus
arm_2L 22363430..22364294 37..901 100 -> Plus
arm_2L 22365193..22365324 902..1033 100 -> Plus
arm_2L 22365377..22367173 1034..2830 100 -> Plus
arm_2L 22367236..22367497 2831..3092 100 -> Plus
arm_2L 22367566..22368176 3093..3703 100 -> Plus
arm_2L 22368246..22368440 3704..3900 98   Plus

BO32538.pep Sequence

Translation from 16 to 3916

> BO32538.pep
MGERFYRCWPFDRNGKVENIYVMEHSDPVPYQQLSTLSPTTALYSNFNNS
LEAGTAERLRLNKTGSQVHSLYVGDGQVQNASEPLSFPSHLNLYQYVRTP
ANFTINSRNRYIPYYNNRSYSASTTGFPIASTPLISSHAHIQDQQGAASY
QTIVPLYQTASHCAQQHTTLASVAPIVDNSFVESTTCPMAGITSHNIKMK
MIPPNVLLPCSRPTTTAVTIQRSTGEDGGDKEGHTFAKITEMSDAVTLQI
TNLDYSLDESHIRSFLLNQLKPITPVVSLVFEGSSYAKVTVPDLYFAKQV
VSNLHRKKIGHKRMLVSYTRDSSLTEVNTLRCQVAGLLKDVPFNTLPMYK
FRELFQSRFKTSISVLDLYKMQDICTINSDNNEEKFISLNPELVNTLDIS
PLMEGLQHSVPYCSIHFKKEQHKGWAEQEIEPLPNVFMSISEIQKLIYPL
LKVHTGDIPVATLLHCVKEELNVSIMANENGVNLEHLICCVQGIQVRANN
FGIKILGWLEINKEMQSGTFNASSNTCSLTASDRTNCGSYFKNSVADPLF
QISREVIELLKMSPKSTMKFNRFIPAYHNHFGKQCRVADYGYTKLIELFE
ALSNVVQIMGDGENRQITLSHRIQIRRFTSDLLRVLRANGNNSVLLSQLP
LVFTQTQNKTFDITDYGVCDLIDILDGLVSSNIVTLGAAQNGKDILISMP
KRKQTNSELEKTCVFAGEMVELFQNALQYTILFQKFVRSYHYHFAYQCRL
SDYGFLKLADLLDAINGLVEMKLTSDEDKKIVLSPQVARRVFAEQCENLI
RNATGNSSHCMKLEQVLVLHKKKYGYQIQPKTLGVMDMATAVELLPYVEL
KKKEQAIWLICHNNDHEFRFLCYRVCKYVMERDPSASVWTNVRGEVKLTK
SQQFVKPIEKSILVRDFNAKYKDHLSESALLAMRQAIEVYDDGGIQCIRL
TRFMKFIIAIVRMLEQRPSMYLYEIKNGLNCGLSTTFEFGFPNLYSVVAA
HKDLFSINNGPTQERSEVSINMNCELRQSSLSKDQCVLESQKLTNSKHRA
QRSFHSHIGEHNGLPISQPPLKRSATINNCSTFQTYHADTDIFNVPANCL
PPRTNLSLPNSFGSSLESGSFSNSYSNKENSMKSLHLFNSSFNSSGELNA
SLGAGDLTNISLGTGIAVDTSNEPSELWRRRQQNFNRPNSSNFRKSDNGT
DGTYTIGNYIAPPIGSIYEPLKYNGQDKEKLPFWIDPIWSKGSEQLRHDI
LNIRLPKARTTKTFSNILSPYTISKNENLKRQLFSFDNHDRKIAASFLDH

BO32538.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG17018-PC 1294 CG17018-PC 1..1294 1..1294 6746 100 Plus
CG17018-PD 1305 CG17018-PD 19..1305 8..1294 6707 100 Plus
CG17018-PF 1305 CG17018-PF 19..1305 8..1294 6707 100 Plus
CG17018-PE 1272 CG17018-PE 1..1272 23..1294 6616 100 Plus
CG17018-PA 1272 CG17018-PA 1..1272 23..1294 6616 100 Plus