Clone BO32541 Report

Search the DGRC for BO32541

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:325
Well:41
Vector:pDNR-Dual
Associated Gene/Transcriptca-RA
Protein status:BO32541.pep: Imported from assembly
Sequenced Size:5917

Clone Sequence Records

BO32541.complete Sequence

5917 bp assembled on 2012-07-27

GenBank Submission: KX798408

> BO32541.complete
GAAGTTATCAGTCGACATGTCGGGGCAGGCGGAGCTCAAGGAGCTGGGCA
TGTTCGAGCTGCGCCCGCTGATCACTAACATCAGCTGCAAGCTGTCCGCG
GTGACAGCGGGGCTGGACGAAAAGCGACAGTTCCTATGCCTCGTTTCTGA
GGAAAACGAGATCCTGCTGCGCTACATAAGCGCCGCCTCCGGCCAGGAGG
TGGTCAAGATGATATCCTGGTTCCGCAACCGCGTCATCCACGACGTCTGC
TTCGATCCGGCGGGCGTTTGGCTGCTGGTGCTATGTTTCGACAACACACT
GCACATCGTGCCCGCCCTGGCGTTGGTGGACAAGGCCCATGGACTGTCCG
CCTGCTCGCTCTACAGCACCACCCAGGTCACCTCCTACATCATCCCCTTT
GTGGGCCCCCACGAGTGTCCCAACTCCAAAAAGTGCCCCAATCACTCCAC
CGGTCTGGAAGAGTCCACGGCGGAGCCAATGGATCAGTTGGCTGAGAACC
TAGAGCAGGCCAGGTTGCAGGAAGGCGAAGAGGAGGAGCCTCTTGGCCAC
GACCTGCCCGAGCACATGCTGGTGCGAAATAGCGGAACTGAGGATGCAGT
GCAGCCACTGCCGCAGCAGCAGCAGACGATCGATACCACCGGCAATAGCC
AGGTGATGGCAGCCTCTTTCATGGCGTCCAAGACCTGCCCCTATCCCTTG
TCCGTCGTCTGGTGGAAGACCAACAGTGGACAGAATAGGGCCATTATCGG
CTACTCGGATGGCTCCATCTGCTTTGTGGGCCTGAGTCCCAACTGCCCCA
TGATTGCGAGCACTGCCATCGAAAACGGATCTGTAATGCGCCTGGTTATC
TGCAAAGATAAAGCCTACGATGGTGTTATGCTGCTGATAACTTCCTCCCT
GAAGCAGCAGTACAAACTTTTGCTGGAGCAAAAGGCAATCAAATACGTCT
ATCCCGGAGACAGTTCCCCGACAACCCGCGAGGGCGCCTGGCAGATCGTG
ATGTCCGTGCAGGACAAGCATCAGAGTGCGGCGACAGGCGCCCGACAAAG
CAATAGTTCCGATCCGGCCTCGGACAGTAGCCAACTGGAAGAGGATGTGT
TCGCGCCTCCGTCCAGCGATGATGTGGTATGCAGTGGTCCAGGAGCAGCC
AACTCAGACCCGTCCACTGTTTCGGCATCCGCAGAGGCAGCCACTGCAGA
CGTGCCTCCACCACCGGCGCCGCCTTCGTACAGTGAGGCAGTGGCTAGGC
AATCCGGTGACCAAGGCGGCGTTCGCTTCCAGCAACAACAGCTGCCAGCG
GGCAGCATGGATGGCATTCTGCCCGCCACGAGAGCCCGACTGGCTTCGCT
CAAGAGTCTGGGATCGAAGAAGCTGCAGGCCATCAAGATGCGACTTTCCG
ATCAGCGGCAAAAGTTCGATGAATTTATGCCGGACTCCACGATGGGCTCG
TTTGCAATCATGGATTCGCCGTCGGTTACGCCGGAGCCCCTAGGCACCAC
CTCCGGATCCTTTTACAACATACAGAACCTGCGCAGCACCTTTCTGCTGA
GTGCCCTGCACAGCAATAGCCACAGCTTGACCGTGCACAGCATCGACATC
AGCCTGAAGCCGCTGTTCGTTTACAAGATACCCAAGCACACCCAGGAAAT
ACTCATTAGCTCCAACATACTCTACGGCATACACTACGTGGACCTGCACT
GCCGCAGCGATTCGGACCACTTCACGGCGGCATCGTTGCTGGACGACCCG
CTAGTCGCGAACACGGAAAAGGAGAACCGCGACGCGGACATTGAGAAGGT
GGATCAGTCGGATGTGAGTGCCCAGAAGAGCGATTCGACGAGCGCAACCA
CCACAGCCACATCGAGCCTAGATCAAAGCGACATGCCCAGTACTGCCATC
AATGCCGTGTCCGTGATCAGCAGCGCAATGGCCTCCCTGCATACCTCCGA
CGAAGATCGCTTTAATAATCTGGCTCAGCTAGGTCTCTTCCGCTTCGAGA
ATGAAACTGTGCTGCATTTATATCAGATGGCACAGTATCGCAATCCCTCC
GCCGAACCAGAGACGCTTACCAAAGAGGAGAAGGCCAAGGCTTTTGAGCT
AAAGGATATCCACACGCCCATGGACTACATCCAGTTCTACGAGACGGCGG
ATGTTAGCAGTGAGTTTTCTCTGCGGCAAATGGAGATTATGCAGTCCGAG
TTTCCGAAAATTAACTACGATCCAAGCTATGTGATCACCAATAAGAATGT
GTACACCATACAGCTGAAAAAGGAGCCGTTCGAATTGTTCCTGGATGCCG
CATTGCAGAACGAGTTCAACCAGTGCCGCGACTTCTGCAACACCTTCGAC
CTCTCCTTCGAGCAGTGCATCGAGTTTGCCGGGGATTACCTGCTCAGGCG
GAAGAAGATCACTCAGGCTCTGCTCACGTACAACAAAGCGCGGGTGAAAC
CAATACGCACAGCCTTGAAACTGGCCATGTATGGACACACCTACGCTCTA
ATGCAGCTAAGTGCTATGGCCCTCAAGTCCACATATCTGCTGCGCTCGCG
GTACTTAGGTCATCCGCTGCTCAAGGGTATTTTGGGAGACATTACGTATC
GTCACTCGGAGGATGTCCGTGTAATCTTGCCCGAGAAACATGAGGAGGAG
GATGTGAACAGCGGTGTTTTCTGCAGCGATTATCATTATGGCGTGGACGA
GTCAATTAGCGCGCTTCAGATGTCGCCTTCTTCGCAGTTCCATTTGGCCA
ACTTGTTGCTCATCACGTTGGCCGAGAAGGCGGTAAACGATAAGAACTAT
ATTCCGCTGTGGAACTTTCTGGTGACCAATAGCAAATATCACACCAACAT
GACGAGCATTGTTCTCTGCCAAAGTGGACTCTTCTCGTCGGCCATTATAC
TGGCTAAGATACGGGGCGTATGCCTGGATACTTTCAATGCCCTGATCAGC
GTGGTGGCCCAGGAGTTTGGATGGTACAACGAGCTGAACGTCTGCCTGTA
CAATCTGAGCGAGAATATATTTTTGGAGACAATAACTTACTTGCCGCATG
TATCCATGGATTACTTTGCTTTCATTCAGGAGAAGTTGCATCATATAAGA
CCGTGTGTGTTGCAGCGCCTGTCGAAGCAACTGAATCCTTTTTCTCCCGC
TCTGAGACCCATTGTGTCCCATAATAGTGACTGCGCCATGTCAAACGATA
ACAATCCGCAGTTGTTTGAGTTCTGCAAGAGTCTAATTGAAACCTATCTG
GCAGTGCTTATACATATGGAATCCCAGCGAGTAAAGTATGACTCTATTGT
AAATGCTTTATCCAATTTCCGCATCAACTATGAAGACAATCAGTTCGCCA
TTGAATCATCACGCTTCAAACCGATCTCAGCTGGTTGTGCCTACTGCGCC
TGTGTTGTGGATGGTACCGCCTACTTCTGGGGCTCCAGCGGCATTCCCAG
CTATTACAGTGCTCAGAAGTCCACGGAGCCACCTGAGCCTGCGCACGCCG
TAAAAAGTCTAGATCTCCTCTCGCAGCTCAATTTGCAGGTGCACGCTATC
AAGTGCGGTCGTCAGCACACACTTATTTTGACTAATAATGGCCTCTATTC
CCTGGGAAACAACAACCTTTGCCAACTGGGCATAGGACGCCACATGCAGA
TGGCCTTGCAGCCGATGCTGGTGACGGCATTGGACGGCATGAACATAACG
ATGCTCGAGGCGGGACAATATCATAATGCGGCTGTGGCCGATGGGAAGCT
CTATATGTGGGGATGGGGCATCTATGGGCAGCTTGGACAGGGAAGCTGCG
AGAATATAGCTACACCACAACTAGTCAGTTTTTTCAAATTTAAGAAAATT
TTACAAATATCGCTAGGGCATGCGCACACCTTGGTGCTGTGTGGAGCACC
CAACAGCCACATGGAGGCTAACCACTGCGGCAACGAGCTCTTCGTGTTCG
GCTCCAATCACTTTGGCCAGCTGGGCACCGGCAATAGTGACCATGGCGAC
ACCAAGACGAACCTGCCTGTGCGCCTGGAAGTGGGCGACTGCAGCCTAAG
ACTGATACACACCAAATTTTTTACCAATTTAGCTGTAGACGAACAGGATC
GTCTGTTCACTTGGGGAAGCTCGCCGCAGGCCTTGCGTCTGGCCAATCAG
ATCAAGCGGCGTGCCAATGCCAAGCAGAAGATGGAGGAGAATCAGCAGCG
GGAGCTGTTGAGCAAGCAACTGGAGGCTACCCTGCTGCCGGCACCCATCC
CGAGTACCAGCACTCTGGTGGAGCCCACCACATCATATGCGGCGGTGGTG
GCCGGCTCCACTCCGAAGTCCAGCGTCAGCGACACCAAAGATTGCCAGGA
CGTGCAGAACGAGGCTGCGCCATCAGACGCTACGGAAACAATTGCACCGG
CGTCTGCAAAAGCGGCGCCACCGCCAGTGCCCGTGGCTTCTCCGCCAGTT
CTTGTCCCAGAACCGGATCCCACGGAGCACCTGACGCCCCATCTAGTGGA
CACCAGCGAGGTGGCAGGACGAATCCTGCAGATCTCCAGTGGCTTGTTCC
ACTTCTGCCTGATCTCGTCCAGCTGCACACTCTATACGTGGGGCAAGAAC
CTGGAACACCAACTCGGCACCGAGGACAAAGATCGAAGGGCGGTGCTTAA
GCCCTCGCCCATCGACAGCATCGAGCGTCCGATGTACGTAGACTGTGGTT
CGGATTTCACGCTGGTCATGACCACCGATCACGTTGTGCGTGCCTTCGGC
GGCAACTCGAACGGTCAGTGCGGTCGGGACTTGGGGCCCAGTGTGGAGAG
GATGCGTCAGAGGGTGGTGTGCCTTCCAGCGACCAAGCGTCTGGTGCGAT
TCGAGAGCCAGTGCGTGGAAGTACCGGTGGAGATCAATCTGCCGAGACCG
CGCATTCGACTAGACCAGGATCCGGTCAGATACCTTAAGGTTATGCCACC
ATATCAGCCGCATTTCTTGCAGCCGGCAAACATAAGCTTCGATCAGCACT
GCTCGGTGGGCACTCCGAACTACAAAAGCAGCACGGAGCACGCGGCCACC
GGTCAGGACTCGGACGACATGCTGAGTAGCCTCGAAAACCTGAGTCAGAA
CGATGCCAGCTTCTCTTACAATGCTCCTGTGCTGGGCGACGCCCACAGTT
CGCTGGACATGGACTACACACCCGAGGAGCAGAGCTACGTGCCGCTGCCA
GAACAGGCAGTTGGATCTGGTATGCCCGCGAATGCAGAGCAGTTGCTGGG
CCGCGACGATGACGATGGCAGCACCTACACTCAGAGCACCGAGGGAATGG
GAGAGTCGTCGCTGCAGCATCTGCGCCACTACATCCATTACTGTCTGTAC
GCCTTTCACGGGTTGTATAATCCCGACAAGATTGGCGAGTGCGCCCGTCC
ACATCGCAACGAGTACCGCATACGTATCTGCATGCTCAACTTTCGCTTCG
TAGAGGCCTTCCGGCTGTGCCTGCAAAGCTGCGGTTCCGCCCAGCGCACC
CTCAAGTTGTTTGAGTACTTCAGCAAGGACACGGGCTATGTGCCGCTGAG
GAGAACCGACCTAAAGCACCTCATCTACCACCTGTGTCTGCACTTCCTGG
AACGCAAGTTCGATATGCTGGAGTGCGAGCGGTTCTTCATGGGCGACCTG
GACTACTATCTGCTGGAGCTGGCCTACGTGTTCTACTTCAACAACAACAA
CTCGACGCTGGAGCAGAATCTCAACCAGAAGTTCAAGCAGCTCATCGCGG
CTGCGGACAGCAATCAAGCGGCCACGTCCGCCGGCCAGGAGCTCGAGCAG
CTGCAGGACACCGATGTCATATTCGATAGCTTTACGGTCAAGTTCAAGAC
GATCCTGTGCCAGCGCCTGCTCAGCTACTCGGACTGCGATGCTGCCAATG
CAAGCTTTCTAGACCAT

BO32541.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:48:23
Subject Length Description Subject Range Query Range Score Percent Strand
ca-RC 5886 CG31037-PC 1..5883 17..5899 29400 100 Plus
ca-RA 5886 CG31037-PA 1..5883 17..5899 29400 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:48:24
Subject Length Description Subject Range Query Range Score Percent Strand
ca-RC 6398 CG31037-RC 94..5980 13..5899 29405 100 Plus
ca-RA 7026 CG31037-RA 521..6407 13..5899 29405 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:48:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29813059..29814428 4530..5899 6850 100 Plus
3R 32079331 3R 29807805..29808410 285..890 3000 99.7 Plus
3R 32079331 3R 29810266..29810809 2269..2812 2720 100 Plus
3R 32079331 3R 29808468..29809006 886..1424 2695 100 Plus
3R 32079331 3R 29809289..29809821 1425..1957 2665 100 Plus
3R 32079331 3R 29812546..29812998 4079..4531 2265 100 Plus
3R 32079331 3R 29809893..29810203 1958..2268 1555 100 Plus
3R 32079331 3R 29810863..29811167 2811..3115 1525 100 Plus
3R 32079331 3R 29807331..29807604 13..286 1355 99.6 Plus
3R 32079331 3R 29812254..29812489 3843..4078 1180 100 Plus
3R 32079331 3R 29811224..29811454 3113..3343 1155 100 Plus
3R 32079331 3R 29811884..29812053 3593..3762 850 100 Plus
3R 32079331 3R 29811513..29811647 3342..3476 675 100 Plus
3R 32079331 3R 29811707..29811823 3476..3592 585 100 Plus
3R 32079331 3R 29812106..29812188 3762..3844 415 100 Plus
Blast to na_te.dros performed on 2014-11-28 11:48:22 has no hits.

BO32541.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-27 15:28:18 Download gff for BO32541.complete
Subject Subject Range Query Range Percent Splice Strand
ca-RA 88..5970 17..5901 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:49 Download gff for BO32541.complete
Subject Subject Range Query Range Percent Splice Strand
ca-RA 344..6226 17..5901 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:51:38 Download gff for BO32541.complete
Subject Subject Range Query Range Percent Splice Strand
ca-RA 525..6407 17..5901 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:51:38 Download gff for BO32541.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29811515..29811647 3344..3476 100 -> Plus
3R 29811708..29811823 3477..3592 100 -> Plus
3R 29810864..29811167 2812..3115 100 -> Plus
3R 29811884..29812053 3593..3762 100 -> Plus
3R 29812107..29812188 3763..3844 100 -> Plus
3R 29807335..29807602 17..284 100 -> Plus
3R 29811227..29811454 3116..3343 100 -> Plus
3R 29807805..29808406 285..886 99 -> Plus
3R 29808469..29809006 887..1424 100 -> Plus
3R 29809289..29809821 1425..1957 100 -> Plus
3R 29809893..29810203 1958..2268 100 -> Plus
3R 29810266..29810808 2269..2811 100 -> Plus
3R 29812256..29812489 3845..4078 100 -> Plus
3R 29812546..29812998 4079..4531 100 -> Plus
3R 29813061..29814428 4532..5901 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:49 Download gff for BO32541.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25637430..25637545 3477..3592 100 -> Plus
arm_3R 25637606..25637775 3593..3762 100 -> Plus
arm_3R 25637829..25637910 3763..3844 100 -> Plus
arm_3R 25637978..25638211 3845..4078 100 -> Plus
arm_3R 25636586..25636889 2812..3115 100 -> Plus
arm_3R 25636949..25637176 3116..3343 100 -> Plus
arm_3R 25637237..25637369 3344..3476 100 -> Plus
arm_3R 25633057..25633324 17..284 100 -> Plus
arm_3R 25633527..25634128 285..886 99 -> Plus
arm_3R 25634191..25634728 887..1424 100 -> Plus
arm_3R 25635011..25635543 1425..1957 100 -> Plus
arm_3R 25635615..25635925 1958..2268 100 -> Plus
arm_3R 25635988..25636530 2269..2811 100 -> Plus
arm_3R 25638268..25638720 4079..4531 100 -> Plus
arm_3R 25638783..25640150 4532..5901 99   Plus

BO32541.pep Sequence

Translation from 16 to 5917

> BO32541.pep
MSGQAELKELGMFELRPLITNISCKLSAVTAGLDEKRQFLCLVSEENEIL
LRYISAASGQEVVKMISWFRNRVIHDVCFDPAGVWLLVLCFDNTLHIVPA
LALVDKAHGLSACSLYSTTQVTSYIIPFVGPHECPNSKKCPNHSTGLEES
TAEPMDQLAENLEQARLQEGEEEEPLGHDLPEHMLVRNSGTEDAVQPLPQ
QQQTIDTTGNSQVMAASFMASKTCPYPLSVVWWKTNSGQNRAIIGYSDGS
ICFVGLSPNCPMIASTAIENGSVMRLVICKDKAYDGVMLLITSSLKQQYK
LLLEQKAIKYVYPGDSSPTTREGAWQIVMSVQDKHQSAATGARQSNSSDP
ASDSSQLEEDVFAPPSSDDVVCSGPGAANSDPSTVSASAEAATADVPPPP
APPSYSEAVARQSGDQGGVRFQQQQLPAGSMDGILPATRARLASLKSLGS
KKLQAIKMRLSDQRQKFDEFMPDSTMGSFAIMDSPSVTPEPLGTTSGSFY
NIQNLRSTFLLSALHSNSHSLTVHSIDISLKPLFVYKIPKHTQEILISSN
ILYGIHYVDLHCRSDSDHFTAASLLDDPLVANTEKENRDADIEKVDQSDV
SAQKSDSTSATTTATSSLDQSDMPSTAINAVSVISSAMASLHTSDEDRFN
NLAQLGLFRFENETVLHLYQMAQYRNPSAEPETLTKEEKAKAFELKDIHT
PMDYIQFYETADVSSEFSLRQMEIMQSEFPKINYDPSYVITNKNVYTIQL
KKEPFELFLDAALQNEFNQCRDFCNTFDLSFEQCIEFAGDYLLRRKKITQ
ALLTYNKARVKPIRTALKLAMYGHTYALMQLSAMALKSTYLLRSRYLGHP
LLKGILGDITYRHSEDVRVILPEKHEEEDVNSGVFCSDYHYGVDESISAL
QMSPSSQFHLANLLLITLAEKAVNDKNYIPLWNFLVTNSKYHTNMTSIVL
CQSGLFSSAIILAKIRGVCLDTFNALISVVAQEFGWYNELNVCLYNLSEN
IFLETITYLPHVSMDYFAFIQEKLHHIRPCVLQRLSKQLNPFSPALRPIV
SHNSDCAMSNDNNPQLFEFCKSLIETYLAVLIHMESQRVKYDSIVNALSN
FRINYEDNQFAIESSRFKPISAGCAYCACVVDGTAYFWGSSGIPSYYSAQ
KSTEPPEPAHAVKSLDLLSQLNLQVHAIKCGRQHTLILTNNGLYSLGNNN
LCQLGIGRHMQMALQPMLVTALDGMNITMLEAGQYHNAAVADGKLYMWGW
GIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTLVLCGAPNSHME
ANHCGNELFVFGSNHFGQLGTGNSDHGDTKTNLPVRLEVGDCSLRLIHTK
FFTNLAVDEQDRLFTWGSSPQALRLANQIKRRANAKQKMEENQQRELLSK
QLEATLLPAPIPSTSTLVEPTTSYAAVVAGSTPKSSVSDTKDCQDVQNEA
APSDATETIAPASAKAAPPPVPVASPPVLVPEPDPTEHLTPHLVDTSEVA
GRILQISSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAVLKPSPID
SIERPMYVDCGSDFTLVMTTDHVVRAFGGNSNGQCGRDLGPSVERMRQRV
VCLPATKRLVRFESQCVEVPVEINLPRPRIRLDQDPVRYLKVMPPYQPHF
LQPANISFDQHCSVGTPNYKSSTEHAATGQDSDDMLSSLENLSQNDASFS
YNAPVLGDAHSSLDMDYTPEEQSYVPLPEQAVGSGMPANAEQLLGRDDDD
GSTYTQSTEGMGESSLQHLRHYIHYCLYAFHGLYNPDKIGECARPHRNEY
RIRICMLNFRFVEAFRLCLQSCGSAQRTLKLFEYFSKDTGYVPLRRTDLK
HLIYHLCLHFLERKFDMLECERFFMGDLDYYLLELAYVFYFNNNNSTLEQ
NLNQKFKQLIAAADSNQAATSAGQELEQLQDTDVIFDSFTVKFKTILCQR
LLSYSDCDAANASFLDH

BO32541.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:37
Subject Length Description Subject Range Query Range Score Percent Strand
ca-PC 1961 CG31037-PC 1..1961 1..1961 10234 100 Plus
ca-PA 1961 CG31037-PA 1..1961 1..1961 10234 100 Plus
CG9153-PA 1058 CG9153-PA 42..192 1175..1337 202 35.5 Plus
CG9153-PB 1058 CG9153-PB 42..192 1175..1337 202 35.5 Plus
HERC2-PC 4912 CG11734-PC 3012..3256 1110..1367 195 28.1 Plus
CG9153-PA 1058 CG9153-PA 162..337 1133..1321 177 27.7 Plus
CG9153-PB 1058 CG9153-PB 162..337 1133..1321 177 27.7 Plus