Clone BO32561 Report

Search the DGRC for BO32561

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:325
Well:61
Vector:pDNR-Dual
Associated Gene/TranscriptTm1-RE
Protein status:BO32561.pep: Imported from assembly
Sequenced Size:2167

Clone Sequence Records

BO32561.complete Sequence

2167 bp assembled on 2012-09-18

GenBank Submission: KX799994

> BO32561.complete
GAAGTTATCAGTCGACATGGATGCCATCAAGAAGAAGATGCAAGCGATGA
AAGTCGACAAGGACGGAGCTCTGGAGCGCGCTCTCGTCTGCGAGCAGGAG
GCACGCGATGCTAACACCCGCGCCGAGAAGGCCGAGGAGGAGGCTCGCCA
GCTGCAGAAGAAGATCCAGACCGTTGAGAACGAGCTGGATCAGACCCAGG
AAGCCCTGACCCTGGTCACCGGCAAGCTGGAGGAGAAGAACAAGGCTCTG
CAGAACGAAAGTATTTCAAGGACATTTGGCATCGTTTCAAAAAGATCTCA
GCAGGTAAAGCGCTTGGAAAATTTATCGCTGGGAGTGGATCCACAAGAAA
AAACACAAGTGCAGCCGCAGTCGGGCAAAACAGTTGCCAAACCGAAACAG
AGGCAGCAGAAACAATTGTTCAAAAGTGATAAGGCGAAGGAGAAGTCCAG
CAGGCAGCAGAGAAAGCGAGCCGGCACCAGGAGCACTCGCAATCCGAGGA
CGCAATCGGAATCTTCGGGCCTGTCATCCCGTTGGTGTTCCATCGAAGAG
CAGTTGAACCTGCTGGACGACCTGCTCTACTACTGCGATGAGGAGGCCGA
ACTGTATCTAGCCCAGCTGTACGAAAGGTTCGAGACACTCCGGCGTAGCA
GGAGTTCCTCGCCAGTGAGCGATTTCTGGAGCGATTCCGACATGGAGCAC
GATGACTCCAGCACCAGTGGCACTGGCAGCCATACAGCCAGCAATACCAG
TCTAGTTCCCGCCTCGCTGAAGCGTCGTGGCCACCAGCATCATCCGCGAT
TCTCGGGCACTCGCCGTCCCAATGTGCCCAATGTCCAGGAGATTCTGGCC
GCACTCTATCGTGGCGACTCAAAGAGCGCCCTGTCCAATCTGAGAGGAGA
GACGCAACCGGAGGAGGAGCAACCACAGCAGCAGACGGAGGAGGTGCTGC
CACCCAGCAGAAGCACTTTAAGCCTGCCCCTCAGTGAATCGGTGACCAAT
TCCCTGGGCAGCAACAGTCCCACGCCCACAGACGAAAGCAGCGTGCAAGA
TGAGGGGGCCAGTAATCCGGCAGCAGCTTTAATAGCTGAGGATGCAGCCC
CACCAGCAGGCACAACCACGTCCAAGAGCAAGAAAAAGAAGCGGGAGAAG
GGTGAAAGGTCAGAGAAATCGGACAAATCTGAGAAATCCGACCGGAAGAA
GAAATCTTCAGGCAAGAAGGAACGCAGCAAACGATCCAATCCCATGGAGC
AAAGCAGCGACAGCCTGGCCACCGATCTCAGTGCCGGGGCCATCGATGAG
GGCATCGCACTGGCCGACGACGATGACAACCAAGCGGCGGAATGGTCCAA
GTTGCGATGCACCAGCGAGGCGGCCGAGATTGTGGCGGAGCGGGAGGCTC
GACGGAACAAGGGACGTTGTGCGGATTATCCGGGACTCGCCTTTGGCAGA
TCCATCTTCAGTTCGGACACCATGATGAAGTTCAACATCATCCGCAACGA
GCTGCACAACATCATGAACACACAACTCAAACGGGCCGAATCCGAGGTTG
CCGCTCTGAACCGTCGCATCCAGTTGCTCGAAGAAGACTTGGAGCGCTCT
GAGGAGCGTCTGGGCTCCGCCACAGCCAAGCTGTCGGAAGCCTCTCAGGC
CGCCGATGAGAGCGAACGTGCTCGCAAAATTCTTGAGAACCGCGCCCTTG
CCGATGAAGAACGCATGGACGCTCTCGAGAATCAGCTGAAGGAAGCGCGT
TTCCTTGCTGAGGAGGCTGACAAGAAATACGATGAGGTTGCCCGTAAATT
GGCCATGGTTGAAGCCGATTTGGAACGTGCCGAAGAGCGTGCCGAGCAGG
GTGAAAACAAAATTGTGGAGCTTGAGGAGGAGCTGCGCGTGGTTGGCAAC
AACCTGAAGTCCCTGGAAGTCTCTGAGGAGAAGGCCAACCAACGTGAGGA
GGAGTACAAGAACCAGATCAAGACCCTCAACACCCGTCTAAAGGAGGCTG
AGGCTCGTGCTGAGTTCGCTGAACGCTCCGTTCAGAAATTGCAGAAGGAA
GTCGACAGGCTCGAAGACGACCTCGTCCTGGAGAAGGAGCGCTACAAGGA
CATCGGAGACGATCTCGACACCGCCTTCGTCGAGCTCATCCTCAAGGAAG
CAAGCTTTCTAGACCAT

BO32561.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:12:19
Subject Length Description Subject Range Query Range Score Percent Strand
Tm1-RE 2136 CG4898-PE 1..2133 17..2149 10665 100 Plus
Tm1-RH 2037 CG4898-PH 368..1808 348..1788 7205 100 Plus
Tm1-RC 1326 CG4898-PC 1..1097 692..1788 5485 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:12:20
Subject Length Description Subject Range Query Range Score Percent Strand
Tm1-RE 2531 CG4898-RE 88..2223 14..2149 10680 100 Plus
Tm1-RC 2651 CG4898-RC 240..1682 346..1788 7215 100 Plus
Tm1-RH 3054 CG4898-RH 645..2085 348..1788 7205 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:12:17
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15288251..15289440 346..1535 5950 100 Plus
3R 32079331 3R 15295112..15295246 1534..1668 675 100 Plus
3R 32079331 3R 15285227..15285355 129..257 645 100 Plus
3R 32079331 3R 15296590..15296710 1668..1788 605 100 Plus
3R 32079331 3R 15284646..15284763 14..131 590 100 Plus
3R 32079331 3R 15286474..15286564 257..347 455 100 Plus
3R 32079331 3R 15307588..15307672 2065..2149 425 100 Plus
3R 32079331 3R 15300747..15300823 1858..1934 385 100 Plus
3R 32079331 3R 15299275..15299347 1785..1857 365 100 Plus
3R 32079331 3R 15303151..15303222 1995..2066 360 100 Plus
3R 32079331 3R 15301009..15301074 1932..1997 330 100 Plus
3R 32079331 3R 15313115..15313197 1895..1977 220 84.3 Plus
Blast to na_te.dros performed on 2014-11-28 13:12:18 has no hits.

BO32561.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-18 16:23:25 Download gff for BO32561.complete
Subject Subject Range Query Range Percent Splice Strand
Tm1-RE 109..2241 17..2151 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:05 Download gff for BO32561.complete
Subject Subject Range Query Range Percent Splice Strand
Tm1-RE 91..2223 17..2151 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:23:18 Download gff for BO32561.complete
Subject Subject Range Query Range Percent Splice Strand
Tm1-RE 91..2223 17..2151 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:23:18 Download gff for BO32561.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15307590..15307672 2067..2151 97   Plus
3R 15296591..15296708 1669..1786 100 -> Plus
3R 15299277..15299347 1787..1857 100 -> Plus
3R 15300747..15300822 1858..1933 100 -> Plus
3R 15301011..15301073 1934..1996 100 -> Plus
3R 15303153..15303222 1997..2066 100 -> Plus
3R 15284649..15284762 17..130 100 -> Plus
3R 15285229..15285354 131..256 100 -> Plus
3R 15286474..15286564 257..347 100 -> Plus
3R 15288253..15289439 348..1534 100 -> Plus
3R 15295113..15295246 1535..1668 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:05 Download gff for BO32561.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11128875..11128944 1997..2066 100 -> Plus
arm_3R 11133312..11133394 2067..2151 97   Plus
arm_3R 11110371..11110484 17..130 100 -> Plus
arm_3R 11110951..11111076 131..256 100 -> Plus
arm_3R 11112196..11112286 257..347 100 -> Plus
arm_3R 11113975..11115161 348..1534 100 -> Plus
arm_3R 11120835..11120968 1535..1668 100 -> Plus
arm_3R 11122313..11122430 1669..1786 100 -> Plus
arm_3R 11124999..11125069 1787..1857 100 -> Plus
arm_3R 11126469..11126544 1858..1933 100 -> Plus
arm_3R 11126733..11126795 1934..1996 100 -> Plus

BO32561.pep Sequence

Translation from 16 to 2167

> BO32561.pep
MDAIKKKMQAMKVDKDGALERALVCEQEARDANTRAEKAEEEARQLQKKI
QTVENELDQTQEALTLVTGKLEEKNKALQNESISRTFGIVSKRSQQVKRL
ENLSLGVDPQEKTQVQPQSGKTVAKPKQRQQKQLFKSDKAKEKSSRQQRK
RAGTRSTRNPRTQSESSGLSSRWCSIEEQLNLLDDLLYYCDEEAELYLAQ
LYERFETLRRSRSSSPVSDFWSDSDMEHDDSSTSGTGSHTASNTSLVPAS
LKRRGHQHHPRFSGTRRPNVPNVQEILAALYRGDSKSALSNLRGETQPEE
EQPQQQTEEVLPPSRSTLSLPLSESVTNSLGSNSPTPTDESSVQDEGASN
PAAALIAEDAAPPAGTTTSKSKKKKREKGERSEKSDKSEKSDRKKKSSGK
KERSKRSNPMEQSSDSLATDLSAGAIDEGIALADDDDNQAAEWSKLRCTS
EAAEIVAEREARRNKGRCADYPGLAFGRSIFSSDTMMKFNIIRNELHNIM
NTQLKRAESEVAALNRRIQLLEEDLERSEERLGSATAKLSEASQAADESE
RARKILENRALADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEA
DLERAEERAEQGENKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQ
IKTLNTRLKEAEARAEFAERSVQKLQKEVDRLEDDLVLEKERYKDIGDDL
DTAFVELILKEASFLDH

BO32561.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:32
Subject Length Description Subject Range Query Range Score Percent Strand
Tm1-PE 711 CG4898-PE 1..711 1..711 3527 100 Plus
Tm1-PH 678 CG4898-PH 37..632 36..620 2420 84.6 Plus
Tm1-PC 441 CG4898-PC 1..395 226..620 1828 93.7 Plus
Tm1-PI 441 CG4898-PI 1..395 226..620 1828 93.7 Plus
Tm1-PO 285 CG4898-PO 75..285 501..711 992 98.1 Plus