Clone BO32573 Report

Search the DGRC for BO32573

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:325
Well:73
Vector:pDNR-Dual
Associated Gene/TranscriptToll-6-RA
Protein status:BO32573.pep: Imported from assembly
Sequenced Size:4576

Clone Sequence Records

BO32573.complete Sequence

4576 bp assembled on 2012-09-18

GenBank Submission: KX795475

> BO32573.complete
GAAGTTATCAGTCGACATGATCTACTATATGCTACTCATACTGCCCGTGG
TCCTGGCCCAGGATCAGCAGCACACCACGGAATCGCTGTCCACCAAGCAC
CACCAGCAGCAGCAGCTGTCGCACTCGAATGCGATAATGGGTGAGGCTGG
GGTCTCCAACTCGCAGCTAATGCAGCCCTCGACTCCGGCGCGAACCCTGC
GACCCTTGACCGCGGGCGCGGGTGGTGACCCTTCGCTGTATGACGCCCCC
GACGACTGTCACTTCATGCCAGCAGCGGGTCTGGATCAGCCGGAAATAGC
CTTAACGTGCAACCTGCGCACGGTGAACAGCGAGTTTGACACAACCAATT
TCAGTGTTATACCCGCCGAGCACACGATTGCCCTGCACATACTGTGCAAT
GACGAAATCATGGCCAAGAGTCGCCTGGAGGCGCAATCTTTCGCCCATCT
GGTTAGGCTCCAGCAGCTGTCCATCCAGTATTGCAAGCTGGGGCGACTGG
GTCGCCAGGTTCTGGATGGTCTGGAGCAGCTGAGGAACCTGACGCTCCGG
ACGCACAACATCCTGTGGCCAGCGCTGAATTTCGAGATAGAAGCGGATGC
CTTCTCGGTCACTCGGAGGTTGGAGAGACTGGACCTCAGTTCGAACAACA
TCTGGTCCCTGCCGGATAACATATTCTGCACCCTGTCCGAGTTGTCTGCC
CTGAACATGAGCGAGAATCGCCTGCAGGACGTCAACGAGCTGGGCTTCAG
GGATCGCAGCAAGGAGCCAACCAATGGTTCCACCGAATCCACCTCCACCA
CCGAATCGGCCAAAAAGAGCAGTAGCTCAAGCACCAGTTGTTCGCTGGAC
CTGGAGTACCTGGATGTGAGCCACAATGATTTCGTCGTGCTGCCAGCAAA
TGGATTTGGCACTCTGAGGAGGCTGCGAGTCCTTTCGGTCAACAACAATG
GCATCTCCATGATTGCGGACAAGGCTCTCAGTGGACTGAAGAACCTGCAG
ATCCTGAACCTGAGCTCCAACAAAATCGTGGCCTTGCCCACAGAACTCTT
CGCTGAGCAAGCCAAGATTATCCAAGAGGTGTACCTGCAGAATAATTCCA
TAAGTGTGCTGAATCCGCAGCTCTTCTCGAATCTGGACCAGCTGCAGGCC
CTGGACCTGTCCATGAACCAGATAACCTCCACCTGGATCGATAAGAACAC
CTTTGTGGGTCTGATTCGTCTGGTTCTGCTTAATTTGTCGCACAACAAGT
TGACCAAACTGGAGCCAGAGATCTTCAGCGACTTGTACACCCTGCAGATT
CTTAATCTGCGTCACAATCAGCTGGAGAACATCGCAGCCGACACTTTTGC
CCCGATGAATAATCTGCACACGCTGCTGCTGTCGCACAACAAACTGAAGT
ATCTGGATGCATATGCTCTGAACGGATTGTATGTACTGTCGCTGCTCTCG
CTGGACAATAATGCGCTGATTGGCGTGCATCCGGATGCCTTCCGGAACTG
CAGTGCCCTGCAGGACCTCAACTTGAATGGCAATCAGCTGAAGACAGTTC
CGCTGGCCCTGAGGAATATGCGCCATTTGAGAACCGTGGATCTGGGCGAG
AACATGATTACCGTTATGGAGGATAGTGCGTTTAAAGGTCTGGGAAATCT
CTATGGTCTCCGCTTGATTGGCAACTACCTGGAGAATATTACGATGCACA
CCTTCAGGGATCTGCCTAATTTGCAAATCCTGAATCTCGCCAGAAACCGC
ATAGCAGTTGTGGAACCGGGGGCCTTTGAGATGACCTCGAGCATTCAAGC
TGTGCGTTTGGATGGCAATGAGCTGAATGACATCAATGGCCTCTTCAGCA
ACATGCCCTCCCTTCTGTGGCTGAATATATCCGATAATCGTTTGGAATCC
TTTGATTATGGACATGTGCCATCCACCCTGCAGTGGCTGGACCTCCATAA
GAATCGGTTGAGTTCCTTATCAAATCGTTTTGGTTTGGATAGTGAGCTAA
AACTACAAACTCTCGATGTGAGCTTTAATCAACTTCAGCGCATTGGACCC
AGTTCCATACCAAACTCTATCGAACTGCTGTTCCTGAACGACAACCTGAT
AACCACCGTTGATCCAGATACCTTTATGCACAAAACCAATCTGACCCGGG
TGGATCTCTATGCGAACCAAATCACAACGCTGGACATCAAGTCCTTGAGG
ATTCTGCCAGTTTGGGAACATCGAGCTCTGCCAGAGTTCTATATTGGTGG
AAATCCCTTCACCTGCGATTGTAACATTGATTGGCTGCAGAAGATTAACC
ATATAACATCGAGGCAATATCCAAGGATTATGGATCTGGAGACCATATAC
TGCAAGTTGCTGAACAACAGGGAGAGGGCCTATATTCCCCTGATCGAAGC
TGAACCCAAGCACTTTTTGTGCACCTACAAGACCCATTGCTTCGCCGTTT
GCCATTGCTGTGAGTTCGATGCTTGTGATTGCGAGATGACCTGCCCCACG
AATTGCACGTGCTTCCATGACCAAACCTGGTCCACAAATATTGTGGAGTG
CTCGGGCGCAGCTTATTCTGAGATGCCGAGACGTGTGCCCATGGATACCT
CTGAGTTGTATATCGATGGCAACAACTTTGTTGAATTGGCGGGACATTCG
TTCCTTGGTCGCAAGAACTTGGCTGTTCTCTATGCGAACAACTCGAACGT
GGCCCACATATACAACACCACTTTCAGTGGCCTTAAACGCCTGTTGATCC
TGCACTTGGAGGATAATCATATAATCAGTCTGGAGGGCAACGAGTTCCAC
AATCTGGAGAACCTGAGGGAGCTATATCTGCAATCAAACAAAATAGCCAG
CATCGCCAATGGGAGTTTCCAGATGCTGAGGAAACTGGAGGTCCTGCGAT
TGGATGGCAATCGATTGATGCACTTCGAGGTGTGGCAACTAAGTGCCAAT
CCCTACCTGGTGGAGATCAGCTTGGCCGACAACCAGTGGAGCTGTGAGTG
TGGTTACCTGGCCAGGTTCAGAAACTACCTGGGTCAGAGCTCGGAGAAGA
TCATAGATGCCTCCAGGGTGAGCTGCATCTACAACAATGCTACGAGTGTT
CTGAGGGAGAAGAACGGTACCAAGTGCACTTTGCGAGATGGTGTAGCCCA
CTATATGCACACCAACGAGATCGAGGGACTGCTGCCCCTGCTCCTGGTGG
CCACCTGTGCCTTTGTGGCCTTTTTCGGTCTGATTTTCGGACTCTTCTGC
TATCGCCATGAGCTGAAGATATGGGCCCACTCCACCAACTGTCTAATGAA
CTTCTGCTACAAGTCACCCCGATTCGTTGACCAGCTGGACAAAGAGCGTC
CCAATGATGCCTACTTCGCCTACAGCCTGCAGGACGAGCACTTCGTCAAC
CAGATCCTGGCCCAGACGCTGGAAAACGACATCGGCTATCGACTGTGCCT
GCACTACCGCGATGTAAACATCAATGCCTACATCACGGATGCCCTCATCG
AAGCCGCCGAAAGTGCCAAACAGTTTGTGCTCGTGCTGTCCAAGAACTTC
CTGTACAACGAGTGGAGTCGCTTCGAGTACAAGAGTGCTCTCCACGAGCT
GGTGAAGCGCAGGAAGCGGGTGGTCTTCATCCTGTATGGAGATCTGCCCC
AGCGCGACATTGACATGGACATGCGGCACTATCTGCGTACCAGCACCTGC
ATCGAGTGGGACGACAAGAAGTTTTGGCAAAAGCTGCGCCTGGCCTTGCC
CCTGCCAAATGGTCGTGGCAACAACAACAAGCGAGTGGTATCCGGCTGCC
TATCGGGACGCACTCCCTCCGTGAATATGTACGCCACAAGTCATGAGTAT
CAGGCCGGCAATGGTGGGGTGATACCGCCACCCAGTGCCCGCTACGCGGA
CTGTGGCAGCAACAATTACGCGACCATCAACGAGTGTGCTGCAGCTGGAG
GAGGTCGTGGGTACAAGCCCATACCCACTTCAGCCTCGGCGGCGGCAGCA
GCTTGTAAATTTAACACCATGAACCAGCTGTCCAAGAAGCAGCAACGGGA
TCTCAGTGTGGCCGGTATGGCCAAGACCCTGGAGCATCAGCACCACCACA
ACCACCAAGCGAATCGCAGGAGCCAGCACGAGTACGCGGTGCCCAGCTAT
CTGCCCAGTGCTGCTCCGGCCTACGACAGTGTGGACTACGCCAAGCAGCA
GATCCGGAACAATGCCAACTGCGAGTGTGTTAACCTGGGCACGGCCAAGA
GGGCTGCTGGAAAAAATCCCGCCTCGGGATTGCCATCCAGCTTTAGCTCG
AACTTTGTGCCACCCGGTGGTGCCTCGTACAACTGCAAGAAATCCTGCAG
TTGCATTGGAGACGATGAGCTGCTCTGCAGCTGTGGCGGAGGTGGCGGCA
TTGGGGTCAATCTCCTCGAGAGTGGCACCCAGAGCAGCGTGACCATGAGC
AGCAGCAGCAACAACAGCCGACAGCCGGAACTCACCCACTACGAGTCCAA
CTTGAGCCTGAACGACGACGAAGACGAGGATCACGATCAGCAGAAGAACC
TGTGGGCGGCAAGCTTTCTAGACCAT

BO32573.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:02:20
Subject Length Description Subject Range Query Range Score Percent Strand
Toll-6-RC 4545 CG7250-PC 1..4542 17..4558 22710 100 Plus
Toll-6-RB 4545 CG7250-PB 1..4542 17..4558 22710 100 Plus
Toll-6-RA 4545 CG7250-PA 1..4542 17..4558 22710 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:02:21
Subject Length Description Subject Range Query Range Score Percent Strand
Toll-6-RC 7624 CG7250-RC 534..5075 17..4558 22710 100 Plus
Toll-6-RB 5746 CG7250-RB 534..5075 17..4558 22710 100 Plus
Toll-6-RA 5517 CG7250-RA 534..5075 17..4558 22710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:02:16
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15337225..15341766 17..4558 22710 100 Plus
2R 25286936 2R 19829223..19829342 2425..2544 255 80.8 Plus
Blast to na_te.dros performed 2014-11-28 12:02:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6823..6959 4425..4559 184 62.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6736..6857 4425..4550 152 61.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1532..1612 4425..4501 151 70.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6801..6922 4421..4543 143 62.7 Plus
roo 9092 roo DM_ROO 9092bp 1079..1164 4417..4502 142 65.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6723..6845 4433..4549 139 62.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2327..2432 4425..4527 136 61.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6780..6891 4433..4542 131 61.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2424 4429..4549 128 61.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2322..2429 4417..4521 127 60.2 Plus
roo 9092 roo DM_ROO 9092bp 1046..1097 4430..4481 124 75.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6757..6889 4425..4552 121 57.9 Plus
roo 9092 roo DM_ROO 9092bp 1107..1170 4421..4484 121 69.2 Plus

BO32573.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-18 16:30:08 Download gff for BO32573.complete
Subject Subject Range Query Range Percent Splice Strand
Toll-6-RA 526..5067 17..4560 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:09 Download gff for BO32573.complete
Subject Subject Range Query Range Percent Splice Strand
Toll-6-RA 534..5075 17..4560 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:55:55 Download gff for BO32573.complete
Subject Subject Range Query Range Percent Splice Strand
Toll-6-RA 534..5075 17..4560 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:55:55 Download gff for BO32573.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15337225..15341766 17..4560 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:09 Download gff for BO32573.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15330325..15334866 17..4560 99   Plus

BO32573.pep Sequence

Translation from 16 to 4576

> BO32573.pep
MIYYMLLILPVVLAQDQQHTTESLSTKHHQQQQLSHSNAIMGEAGVSNSQ
LMQPSTPARTLRPLTAGAGGDPSLYDAPDDCHFMPAAGLDQPEIALTCNL
RTVNSEFDTTNFSVIPAEHTIALHILCNDEIMAKSRLEAQSFAHLVRLQQ
LSIQYCKLGRLGRQVLDGLEQLRNLTLRTHNILWPALNFEIEADAFSVTR
RLERLDLSSNNIWSLPDNIFCTLSELSALNMSENRLQDVNELGFRDRSKE
PTNGSTESTSTTESAKKSSSSSTSCSLDLEYLDVSHNDFVVLPANGFGTL
RRLRVLSVNNNGISMIADKALSGLKNLQILNLSSNKIVALPTELFAEQAK
IIQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQITSTWIDKNTFVGLI
RLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNL
HTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSALQD
LNLNGNQLKTVPLALRNMRHLRTVDLGENMITVMEDSAFKGLGNLYGLRL
IGNYLENITMHTFRDLPNLQILNLARNRIAVVEPGAFEMTSSIQAVRLDG
NELNDINGLFSNMPSLLWLNISDNRLESFDYGHVPSTLQWLDLHKNRLSS
LSNRFGLDSELKLQTLDVSFNQLQRIGPSSIPNSIELLFLNDNLITTVDP
DTFMHKTNLTRVDLYANQITTLDIKSLRILPVWEHRALPEFYIGGNPFTC
DCNIDWLQKINHITSRQYPRIMDLETIYCKLLNNRERAYIPLIEAEPKHF
LCTYKTHCFAVCHCCEFDACDCEMTCPTNCTCFHDQTWSTNIVECSGAAY
SEMPRRVPMDTSELYIDGNNFVELAGHSFLGRKNLAVLYANNSNVAHIYN
TTFSGLKRLLILHLEDNHIISLEGNEFHNLENLRELYLQSNKIASIANGS
FQMLRKLEVLRLDGNRLMHFEVWQLSANPYLVEISLADNQWSCECGYLAR
FRNYLGQSSEKIIDASRVSCIYNNATSVLREKNGTKCTLRDGVAHYMHTN
EIEGLLPLLLVATCAFVAFFGLIFGLFCYRHELKIWAHSTNCLMNFCYKS
PRFVDQLDKERPNDAYFAYSLQDEHFVNQILAQTLENDIGYRLCLHYRDV
NINAYITDALIEAAESAKQFVLVLSKNFLYNEWSRFEYKSALHELVKRRK
RVVFILYGDLPQRDIDMDMRHYLRTSTCIEWDDKKFWQKLRLALPLPNGR
GNNNKRVVSGCLSGRTPSVNMYATSHEYQAGNGGVIPPPSARYADCGSNN
YATINECAAAGGGRGYKPIPTSASAAAAACKFNTMNQLSKKQQRDLSVAG
MAKTLEHQHHHNHQANRRSQHEYAVPSYLPSAAPAYDSVDYAKQQIRNNA
NCECVNLGTAKRAAGKNPASGLPSSFSSNFVPPGGASYNCKKSCSCIGDD
ELLCSCGGGGGIGVNLLESGTQSSVTMSSSSNNSRQPELTHYESNLSLND
DEDEDHDQQKNLWAASFLDH

BO32573.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:38:08
Subject Length Description Subject Range Query Range Score Percent Strand
Toll-6-PC 1514 CG7250-PC 1..1514 1..1514 7950 100 Plus
Toll-6-PB 1514 CG7250-PB 1..1514 1..1514 7950 100 Plus
Toll-6-PA 1514 CG7250-PA 1..1514 1..1514 7950 100 Plus
Tollo-PA 1346 CG6890-PA 18..1210 63..1245 2645 43.5 Plus
Toll-7-PA 1446 CG8595-PA 105..1351 117..1374 2372 40.4 Plus