BO32614.complete Sequence
4381 bp assembled on 2012-07-27
GenBank Submission: KX795751
> BO32614.complete
GAAGTTATCAGTCGACATGGCAGCGAAGCGGGCGGAAAGTCCGGAGAAGC
GGGCTAGTCCGGAGCCCACTCTGCGTGGACTAACCACAAAGGTGGCGCTG
CGGCGTCTACATGAGGAGATTGAAAAACGGGTGCAACTGGAGCACGAGCG
GCAATACGGAGCGGAGAGCCCCTATCGAAAATTGCGGGCGGCCTTTGTGA
AGCGGTACGATAGCCCACTGGGATGGCTTTCCATTGGAAGCAGTTTGCTG
GCTAGTGGAGCACTGCTCGCTACAGGAATGCTATGGCCCGCCTTGTGCCT
GCTGGCCATCTTATCGCTGGACCTCTTTGTGGTGGTCCGGGAGAACAACC
TGCGGCGCACAGAGATCTTCCGGAAGGCACGACACGCGATTTCGGAAATT
AAACTAGCGGAACAGCACTTCAGTGACGATTGGCAGCAATCCAACTATCC
GCACCTAAGTAATCCCATGTCGCCCTGCGTTTCCCTGCAGTGGACCTACC
GAGATGGAAAAATTGTCAACTTGCCGTGGGCTTTGTTGGTGCGCGGGGAT
TACATCGTTCTACGGCCGGGACACATTTCACCCGGACCTTGTCACGAACT
GGAGACAAATAAATTTTTTGCTGCTAACGAAATATATGGAGCTGCTCCTC
ACGGAGATCCTCCAGTGAAACCTGTGGCACGACCTCCGCTGCCCAATCTC
GTTTGTTGTTTGGAAAGCACACCTTACCTGGATAACCTTACTGTTTGCCT
CAAAAACTCTCTGAAGCGACCGCCGACCATCTACAATCAGCAGCGCTATC
TGCTGGTCACCAAGTATATACAGCAGTGGGGCTTCATTAGTGCCCTAGTT
ATCACGCTCATCTCGGGGTTACTGCGCCTCCATGGCTATGGCCTGCCTAC
CGATGAGAAGCACAACTGGCGCTTTGTGCTCGTCGAATCCTCGGCGGCGG
CCATAGTTCCCCTATTGCCGCTTATCTTCCCGCTCATGTGGATATCCATG
AACCTGTGGGGAATAGCTCGATTGCAGTGTTTTCTAAAGACGCCTCAGGC
TGCGTTGGAAAAGAGTACAAGCAAATCGTTCGAAGAGGACCTGGACACGC
CCTCGTACGACTATCAGAATATGTCCATGCTTCGTTCCAGTGTGCTCCGC
ATCTGGATGCAGCTGTGGCGTGGTGACAGTGAACTCCTGCCGCGCTCAGC
CAATCTGGTACAGGTGCTGGGGTCCATTTCGGCGCTGTGCTGCGTGGACA
AGAAAGGTATCCTGTCGTGGCCCAATCCCACCGCCGAAAAGGTATTCTTC
CTGCACAACACAGACGAGGAGGCTCGCGAGGATGGAGCAGGCAGTCAGTC
TTCTTCACAGAGCGAGAGCGACGACGTACCGGTTGTGGATGAGGACCACA
AGGAGCGCGGAATAGTGGCTGAAGTGCTGGACCTCACGCACGACCAACAC
TGCCCCTTTCGGCTGGAGTTCGACGATCACGAATGGAAGGCGCACATCAA
GTCCTTGAAGCCACTGGGTCTTGCCATTCTGCTAAACACCTGTTCTCCAC
TCACCCACGAGCACTACGCACAGTTCTGCGGTCATGTAACCGCGGTGGCT
ATGCTCGACAAAGATCTGGTACCTGTGACTAATCGGTATGCGTATGCACT
CATTGAGTCCAGTAAAAGCTTTTTGCATGGACGCTGCCTTTGCGAACTGG
CCAAACAGATTGGATTCACCGACCATGCCACTGATCGGTTCGCGCTGGAG
GGTCAATTGGCTAGCTATCGCCACTTGCAACCTGATGTTGTGCGAAGGGA
CATTCGTTTCGCCCGGCAGCTCCAGCTGTCCTCCAAGGTGAAGGTCCCAT
TCCCGCACTCTTTGTCTGTGGTCATGCGCGAGAATCCAGGCGGCTATTTA
TCACTTTTCACCCAGGGAACAGCAGACATTATACTGGACTGCTGCGATGA
CTTTTGGGACGGCATTGATCTGCGACCATTGTCCGCACAGGATCGCAAGC
GTGCACTGGACTTTTATCAGCGCAGCGCGCTGACGTCCTATTGTACAGCG
TTTGCCTATCGACCTCTAAGGCACGGCATCCATGGAGCCCTTAGCGGTCC
TCAACGGAGTGGAGGTGACTGTTTGTATCTGGAGCTACCGCCGGAGTCAA
AGCTGCGCATGCAGCACGTGGACAAGACCCATTGCGACTTCCAGGGCGGA
CATCACGTCAAGCTGAGCCACAGCATTAGCACGGACTCATTGCTATTTTC
GGAGAACAAGGACGAGGAGTGTAACGATGTGGAGGGCTGCTTCGAGATGC
AGTGCCATCAGGTATTCATCGGCATGGTGACAATGCAGTACCAGGCGCAA
AACGATATCGTACGACTCGTTGAGCATCTCGAACAGGCCTGCATACGCTT
TGTTCACTTTAGCAAAGAAAACGAACTGCGCTCGCGTGTCTTCTCTGAGA
AAATGGGTCTAGAGTCCGGATGGAACTGCCACATCTCGCTACTGAGCGAA
CCTGAGCCGGATAGTGAAAAGGAGCGGATAAGTGCCAAGCCAAAGGAGTT
CCCGGAAAATATTGGTAAACCCCAAGCCACCACCTCAACCACTGCCACCA
CCACTACAACAGACCATGAGAACAACCATCATCCCAGTGCCAAAGTCATG
TACATATCGCCCCCCGCACCCGCACCTGCCACTGCATCTGTATCCGAATC
CATATCTGCAGCTAAAACCACTGAAATTGTAGGTGACGGCCCAGAAATTA
GTTATCTCTTGGGACCGCCAAACAATCTGGAGTCGTCAAAGACCCTGAGC
TCTTCAGCTCCTGGTGCCATTTCCAATCCGGATGAGAATCCACTTAACGC
CCTCAATAGTGGGGATTCCCATTCACCTGATAGCGAGGGCAGTAAGGAGA
GCTCTCAGGATAGCTGCACAAAGAATAACCCACCAGGCGATTCTGAGTTG
GAGGCGGAAACCGAGGCGAACAAGCACAAGCAGCGCCATTCGCTGGACTC
TGCCATGGACGAAAACTGCCGTTCGTTGAGCACACTCACTGAAAGCACGG
ATCAGAGTGCACCCATCAACTTCGATATGTCAAATAGGGCAAAGCTGCCA
AGGGGCATTGAAAACATTCGGCCGCATTTGGAACAGGTTGACAATGTCCC
ACTGCAAGTATCGCTTTTTACGGACTGCTCAGCGGAAGCCACGCGTCAGA
TGCTGGACATCATGCAATCCTACGGCGAGATTGTTGTCTGCCTTGGAAGT
TCGGCCAGTAATGCCAATGCGGACATTTTTCTGCAGGCCGACTGTAGTAT
AGCCGTGGAGCCGTTGTATCCGCAAGTGTGCCAGGATGTGGACGCGTACA
CGGAAGCCAATATCCAGAACAACAAACTGTTGTGGCAGCGGCATTCCGGC
AAGTCAAAGGGAAACGATGATGAGGAGCTTCTGGAGGGCGGCCTTCATGG
ATGCGCCATGCAGTCGCCAGCTCACACCATCTCGCCACTGTACTTAAGCC
GGCTGCTCAACTCTCTGCCCTGTTCCATTGCCGTTTGCCGCGACGACCCG
CTTTCGCTGGTGGCCATAATTGAGCTTTCACGTCGATTCTCTCTGGGCCT
GTGGAACTGCATCCAGTACTGGGCTTGCTGCGCAGGCTCTATCTCCATTC
TGAACGTGCTGTGCGCGTGCCTCTCGCAACCCCCGCTCGTAACGCCGCTG
CTCGGCATTTATCTGATGTGTGTGCCGGTGCCGCTAATAGCCATTTCGCT
AGCACACATCGACGTGGATCCCAAAATCATGAATCGGGCAACAAGCAAAA
AGCAGACGGACTATGATTCTCGCGCCTTTGCCTTTGTCATGTGGTGCTAC
GGCTGCAAGTTTATTGTACTGGTCGTGTCTCTGCTTGTTTCCTATTGGAT
GCTCTTACCAAACACCCAATTAAATCCCGCTGAACCAGCCACTGAGGAAC
CCGTGTTGGAAATCGACGATGATGACGACCCGGAGTTTTATCAATTTCTT
TACATTGCTAGAAGCTCTGCGCTGCTAGGCATAATCCTACACTTCGTTTT
CATTTCTGTCACCTTTGTGCATCGAGACCACGCGCTCTGGCAGCGCAATC
CATTTACCAATCGTATTTGGGCTTTTACATGTTTGTTCTTAGTCCTCATC
CATGGTATTATTTGCTTTGTGCAACTGCTGCTGGAGGATTTCTGGGTTCA
GCTGCCCAACCAGTGGTTGGCCTTGTTAATCTTATTTGGTGGCAGCTTGC
TGAGTATGCTCGTCAGCGAGCTGGCGAAATTCCAGGAGAACAAGGTTAAC
GCGCGCTATCAGCGTCGGGCGCGTCTTGACTTCGGTACCAAATTGGGCAT
GAATTCGCCCTTCGCAAGCTTTCTAGACCAT
BO32614.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:50:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)k05819-RA | 4350 | CG3054-PA | 1..4347 | 17..4363 | 21735 | 100 | Plus |
| l(2)k05819-RD | 4305 | CG3054-PD | 1619..4302 | 1680..4363 | 13420 | 100 | Plus |
| l(2)k05819-RC | 4305 | CG3054-PC | 1619..4302 | 1680..4363 | 13420 | 100 | Plus |
| l(2)k05819-RD | 4305 | CG3054-PD | 1..1619 | 17..1635 | 8095 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:50:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)k05819-RA | 4864 | CG3054-RA | 143..4489 | 17..4363 | 21735 | 100 | Plus |
| l(2)k05819-RD | 5201 | CG3054-RD | 1761..4444 | 1680..4363 | 13420 | 100 | Plus |
| l(2)k05819-RC | 4819 | CG3054-RC | 1761..4444 | 1680..4363 | 13420 | 100 | Plus |
| l(2)k05819-RD | 5201 | CG3054-RD | 143..1761 | 17..1635 | 8095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:50:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4396968..4399074 | 1777..3883 | 10535 | 100 | Plus |
| 2L | 23513712 | 2L | 4395235..4395952 | 802..1519 | 3590 | 100 | Plus |
| 2L | 23513712 | 2L | 4394543..4395178 | 167..802 | 3180 | 100 | Plus |
| 2L | 23513712 | 2L | 4399353..4399601 | 4046..4294 | 1245 | 100 | Plus |
| 2L | 23513712 | 2L | 4396009..4396172 | 1517..1680 | 820 | 100 | Plus |
| 2L | 23513712 | 2L | 4399136..4399299 | 3883..4046 | 820 | 100 | Plus |
| 2L | 23513712 | 2L | 4394338..4394489 | 17..168 | 760 | 100 | Plus |
| 2L | 23513712 | 2L | 4396809..4396906 | 1680..1777 | 490 | 100 | Plus |
| 2L | 23513712 | 2L | 4399661..4399730 | 4294..4363 | 350 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:50:15 has no hits.
BO32614.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-27 17:06:01 Download gff for
BO32614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)k05819-RA | 141..4487 | 17..4365 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:25 Download gff for
BO32614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)k05819-RA | 143..4489 | 17..4365 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:52:11 Download gff for
BO32614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)k05819-RA | 143..4489 | 17..4365 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:52:11 Download gff for
BO32614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4396010..4396172 | 1518..1680 | 100 | -> | Plus |
| 2L | 4396810..4396906 | 1681..1777 | 100 | -> | Plus |
| 2L | 4394338..4394489 | 17..168 | 100 | -> | Plus |
| 2L | 4394545..4395178 | 169..802 | 100 | -> | Plus |
| 2L | 4395236..4395950 | 803..1517 | 100 | -> | Plus |
| 2L | 4396969..4399074 | 1778..3883 | 100 | -> | Plus |
| 2L | 4399137..4399299 | 3884..4046 | 100 | -> | Plus |
| 2L | 4399354..4399600 | 4047..4293 | 100 | -> | Plus |
| 2L | 4399661..4399730 | 4294..4365 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:25 Download gff for
BO32614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4396010..4396172 | 1518..1680 | 100 | -> | Plus |
| arm_2L | 4396810..4396906 | 1681..1777 | 100 | -> | Plus |
| arm_2L | 4394338..4394489 | 17..168 | 100 | -> | Plus |
| arm_2L | 4394545..4395178 | 169..802 | 100 | -> | Plus |
| arm_2L | 4395236..4395950 | 803..1517 | 100 | -> | Plus |
| arm_2L | 4396969..4399074 | 1778..3883 | 100 | -> | Plus |
| arm_2L | 4399137..4399299 | 3884..4046 | 100 | -> | Plus |
| arm_2L | 4399354..4399600 | 4047..4293 | 100 | -> | Plus |
| arm_2L | 4399661..4399730 | 4294..4365 | 97 | | Plus |
BO32614.pep Sequence
Translation from 16 to 4381
> BO32614.pep
MAAKRAESPEKRASPEPTLRGLTTKVALRRLHEEIEKRVQLEHERQYGAE
SPYRKLRAAFVKRYDSPLGWLSIGSSLLASGALLATGMLWPALCLLAILS
LDLFVVVRENNLRRTEIFRKARHAISEIKLAEQHFSDDWQQSNYPHLSNP
MSPCVSLQWTYRDGKIVNLPWALLVRGDYIVLRPGHISPGPCHELETNKF
FAANEIYGAAPHGDPPVKPVARPPLPNLVCCLESTPYLDNLTVCLKNSLK
RPPTIYNQQRYLLVTKYIQQWGFISALVITLISGLLRLHGYGLPTDEKHN
WRFVLVESSAAAIVPLLPLIFPLMWISMNLWGIARLQCFLKTPQAALEKS
TSKSFEEDLDTPSYDYQNMSMLRSSVLRIWMQLWRGDSELLPRSANLVQV
LGSISALCCVDKKGILSWPNPTAEKVFFLHNTDEEAREDGAGSQSSSQSE
SDDVPVVDEDHKERGIVAEVLDLTHDQHCPFRLEFDDHEWKAHIKSLKPL
GLAILLNTCSPLTHEHYAQFCGHVTAVAMLDKDLVPVTNRYAYALIESSK
SFLHGRCLCELAKQIGFTDHATDRFALEGQLASYRHLQPDVVRRDIRFAR
QLQLSSKVKVPFPHSLSVVMRENPGGYLSLFTQGTADIILDCCDDFWDGI
DLRPLSAQDRKRALDFYQRSALTSYCTAFAYRPLRHGIHGALSGPQRSGG
DCLYLELPPESKLRMQHVDKTHCDFQGGHHVKLSHSISTDSLLFSENKDE
ECNDVEGCFEMQCHQVFIGMVTMQYQAQNDIVRLVEHLEQACIRFVHFSK
ENELRSRVFSEKMGLESGWNCHISLLSEPEPDSEKERISAKPKEFPENIG
KPQATTSTTATTTTTDHENNHHPSAKVMYISPPAPAPATASVSESISAAK
TTEIVGDGPEISYLLGPPNNLESSKTLSSSAPGAISNPDENPLNALNSGD
SHSPDSEGSKESSQDSCTKNNPPGDSELEAETEANKHKQRHSLDSAMDEN
CRSLSTLTESTDQSAPINFDMSNRAKLPRGIENIRPHLEQVDNVPLQVSL
FTDCSAEATRQMLDIMQSYGEIVVCLGSSASNANADIFLQADCSIAVEPL
YPQVCQDVDAYTEANIQNNKLLWQRHSGKSKGNDDEELLEGGLHGCAMQS
PAHTISPLYLSRLLNSLPCSIAVCRDDPLSLVAIIELSRRFSLGLWNCIQ
YWACCAGSISILNVLCACLSQPPLVTPLLGIYLMCVPVPLIAISLAHIDV
DPKIMNRATSKKQTDYDSRAFAFVMWCYGCKFIVLVVSLLVSYWMLLPNT
QLNPAEPATEEPVLEIDDDDDPEFYQFLYIARSSALLGIILHFVFISVTF
VHRDHALWQRNPFTNRIWAFTCLFLVLIHGIICFVQLLLEDFWVQLPNQW
LALLILFGGSLLSMLVSELAKFQENKVNARYQRRARLDFGTKLGMNSPFA
SFLDH
BO32614.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:12:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)k05819-PA | 1449 | CG3054-PA | 1..1449 | 1..1449 | 7655 | 100 | Plus |
| l(2)k05819-PD | 1434 | CG3054-PD | 1..1434 | 1..1449 | 7553 | 99 | Plus |
| l(2)k05819-PC | 1434 | CG3054-PC | 1..1434 | 1..1449 | 7553 | 99 | Plus |
