BO32642.complete Sequence
3679 bp assembled on 2012-07-27
GenBank Submission: KX795160
> BO32642.complete
GAAGTTATCAGTCGACATGTTTGGTTTATGCGAAAAGTTGATGACACATT
TCGCTGTCATTTTGACCGCATTTTCCTTCTCCCAGCCGCTGTTGTTGTTG
CTGATTTGCGGGCCGCATGGCGGCACCTTCCCCTCGACATCCATCCACTG
GGCGGAGGCCTCGGCGGCGGATGAAGCTGTCGGCAAGTGGGCCACCCAAT
TTGGCGACGAGCTGTTCGCGCTGGCGCAGAAGATCACCAAGTCGCAGGAG
ATCAAGGAGAAGTACAAGGAGTACAATGCCCGCGTGGAGCTGAAGAACGG
CACCGAACTGATTAAGTCAATAACGAAAAATGTGGGCAGAATGCTGGCGA
GGAAAATGGACGCGGTGCGGTGCATCCAGGAGCGTGCGGAATATGTGAAC
GAGAACTTTGAGTTTAATCTCACCTATGCGCTTCAGAACTTCACCTACTT
TTCTAGCAAGTATTCGACCTTTAATGGAAACAGTTCCGAGGAGCTGGAAC
CTAATGAGGCTGAGTTCGCCTGGATGTATCGGAATATGGAGTTGAATCCG
GACACACACTTCTACAATACGCCAGTGGACACGGAACACAGTTCGGTGCA
CGTGCCATCGAATATATGGGATCGATCGGAACGTGTCCTGAAGACCATAA
TGTGGTCCGAGCATCTGGACGAGGTGTTCCGGCAGAATTACCAATCCGAT
CCGGCCTTGTCGTGGCAGTACTTTGGCTCCGATACGGGAATCCTGCGCCA
CTATCCGGCTGCCCAATGGACTGATACCAGACCAAATCGGGATGATGCCG
ACACCTATGATTGCCGCAAGAGGTCTTGGTACATTGAGACAGCCACGTGT
TCAAAGGACATTGTCATCCTGCTGGATCATTCGGGTTCAATGACGGGCTT
CCGGCATCATGTGGCAAAGTTTACCATTCGCAGCATCCTAGACACTTTCT
CCAACAATGATTTCTTCACCATTCTGCGGTACTCGAGTGAGGTAAATGAC
ATAATACCCTGCTTCAATGGAGCTCTCGTCCAGGCGACACCCGAAAACAT
AGAGGTCTTCAACCAGCAAATCGAACAGTTGGACGATCCTGAAGGATATG
CTAATCTCACCTTGGCCTACGAGACGGCCTTCCAACTGCTGCGAAAATAC
TACGATAGTCGTCATTGTGTCACCAATTCGACGTGCAATCAGGCCATTAT
GTTGGTCACCGACGGAGTGGCTGGAAATACCACCGAAGTCTTTCAGAAGT
ACAACTGGGGCAATGGCGAGAATGGAACCTCGCAGATGGACACACGTGTG
TTCACCTATCTGCTGGGCAAGGAGGTCACCAAGGTGCGCGAAATCCAGTG
GATGGCCTGCCTCAATCGGGGCTACTACTCGCATGTCCAAACTTTGGATG
AGGTCCACGAAGAGGTGCTCAAGTACGTCGATGTCATTGCCACGCCCTTG
GTGCTGCAGAACGAACAACATCCGCCCACCTGGACGCACGCCTTCACGGA
CAAAACGTACGATCCAAAAACTTCCAATGAAAAACGACCTCGCCTAATGA
TATCCGTGGGAGTGCCCGCCTTTGATCGCTTCTATCGCCACGCGAACAGC
ACAAATCCGAGGGCACGTTTGTTGGGAGTCGCTGGAACAGACGTGCCCGT
GGAAGATATAGACAAGCTGACACTGCCCTACAAGCTGGGTGTTAATGGCT
ACTCTTTTGTGGTGTCCAACAATGGATATGTTCTGCTGCATCCTGATCTA
CGACCCATTGGGACCAATGGAAAGATGAATCCCAACTATAACAGCATCGA
TTTCACCGAAGTGGAGCACCTGTTCGAAGATCAAAGTCCGCGGGAACCGG
GCGAATCTATTCTACACATACGCAACGCCATGGTGCGCCACGAAGCCAAT
GAGTTCAAGAGCATATCGGTCAAGTTTCACTATGACAAGATGCGCCGCGT
TTCCGAGGAGAAGCAGGACTACTTCTTTGCCCCACTGCCCAACACTCCAT
TCACCTTGGGCATCGTAATGCCCAGCGAATATGGCAAAACTTGGATCAAA
GTTGGCGAGGAGGTGGACAAGAACAAGCACATGAAGATAAATATATCGGA
CTTTTTCATCGGCGAAAACTGGAAAGTTCATCCCGATTGGGTTTATTGCA
AATACCACTATCTGGAGGGTCATGAGTTTAAAACACCTGAGGCGGAGTTG
CGCGAGTTTCTGGCCAAGATGCAAAACGATTGGAAGTGGTCAGAGCAATA
TGCGGAGGATGAATCCGACTGGGACGACAAAGATGATCTGAACTGTGGTC
GCAAAACGCTGGGTGATGATGCCTACTATTGCAACAAGGAGCTGGTGAAC
CTGCTCATCTTCGACGCCAAGGTAACGAATTCCAGCTACGGTGTTTGGCG
GTTCGAGAGCGATGAGGAACGCCAGTTGATCGAGCGGTTCCGTGCTGATC
TGCGATTTGTGGCCACCATGAGTGGCCTGACCCGTTGGCAGTTTATCTTC
GGAGAGGTTGAGGTGGACACGGATCGTGAATTCGGGGACTACCATACCAC
GGCCATCGATGAGACCTGGTACAAGAGTGCCATCCTGCAGCATCACGAGG
ACCGAGCGGAGAGCTTTGTCTATTCGGTGAAATATTACGATGATCCCATG
GAGGACAGCGAGGTCAAGGTAACCGCCTCACATGCCATCTTTCCGAGGGA
CGGTGGCAAGGAGGCGCCCGCCTGCGTAGTGGGCTTCCAGTTTTCCCACG
CCCGCATGTGGGAGCGCTTCTTCAACATCACCGCAGTGGATCATTGCAAC
CATTGCTTGCCCATCTGCACTGATGACGACGTGGATTGTGTGGTGATTGA
CAATAATGCGTATATCGTAATTGGACAGAATATCAACACCACTGGCAAAT
TCTTTGGCGAATTCCACGGCGATGTTATGACTGCGATGGTGGAAAGGGGC
ATCTTTCTCAGCATAGAGGTCTACGATTACCAGGAGCAATGCAAGGAGGA
GCCAAAGGCGGGTAGCGATGGGCACGGTCTGCTGCATCCCCTTCGATTGT
TAAGCCTCGGCTGGAAGTATTTAGTAGGTCGACTCTTCTTTGAATACCAG
AGAATTCAATGGTGGGCTGATGGAGCGCCATTTATGGAATACACAGATGA
GATTGAAGACGAGTACGTGGCAGTGGGTGATGGAGGAAAGTCTTCAGCTT
CGAAGCCAAAAGATGATAGTGACGACGAAAACGCCATGTTCGATGAACCC
GAACCCGATCCCATCTATAAGGCATGTGACAAGCGATCCACTCTTTATGC
ACTGCAGCCATCTGCCCTCGTGGGCATTAATGACTTTGTGGAGGCGCCTT
CAACTCGACCCTTCTTGGTTAAGAAGATTCCGAACTCCAATCTGGTGCTG
GTGGTGGTCAATGTCCTGATGCCGTCGCGTAGCGTTCGCCTGACCACCGA
ACCGCAGCGTATGGAATACGATAAAGAATTCCCCTGCTATAAGCTCAATA
TGAGTTTCTACGAACGACGGCGCATCGAAGAGTGTTATACGGTACACGAA
GATGAGGAACTGTACACCTATTGCGGCAATGCCTCGCGGCTGGTTTTGAC
GCTTCAGCTAATGCCGCTGACCATAATTTTAGTGTTTTACCTGACGCACA
GCTTTATGCGTGCAAGCTTTCTAGACCAT
BO32642.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:49:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42817-RB | 3648 | CG42817-PB | 1..3645 | 17..3661 | 18225 | 100 | Plus |
| CG42817-RA | 3648 | CG42817-PA | 1..3645 | 17..3661 | 18225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:49:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42817-RB | 5790 | CG42817-RB | 600..4244 | 17..3661 | 18225 | 100 | Plus |
| CG42817-RA | 4919 | CG42817-RA | 600..4244 | 17..3661 | 18225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:49:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16235620..16236949 | 178..1507 | 6650 | 100 | Plus |
| 2L | 23513712 | 2L | 16238155..16238660 | 2289..2794 | 2530 | 100 | Plus |
| 2L | 23513712 | 2L | 16239202..16239624 | 3132..3554 | 2115 | 100 | Plus |
| 2L | 23513712 | 2L | 16237509..16237887 | 1762..2140 | 1895 | 100 | Plus |
| 2L | 23513712 | 2L | 16238728..16238970 | 2795..3037 | 1215 | 100 | Plus |
| 2L | 23513712 | 2L | 16237133..16237314 | 1507..1688 | 895 | 99.5 | Plus |
| 2L | 23513712 | 2L | 16232074..16232234 | 17..177 | 805 | 100 | Plus |
| 2L | 23513712 | 2L | 16237950..16238099 | 2139..2288 | 750 | 100 | Plus |
| 2L | 23513712 | 2L | 16239813..16239920 | 3554..3661 | 540 | 100 | Plus |
| 2L | 23513712 | 2L | 16239042..16239135 | 3038..3131 | 470 | 100 | Plus |
| 2L | 23513712 | 2L | 16237366..16237445 | 1683..1762 | 400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:49:12 has no hits.
BO32642.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-27 17:05:54 Download gff for
BO32642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42817-RA | 604..4242 | 23..3663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:06 Download gff for
BO32642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42817-RA | 606..4244 | 23..3663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:51:56 Download gff for
BO32642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42817-RA | 606..4244 | 23..3663 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:51:56 Download gff for
BO32642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16237951..16238099 | 2140..2288 | 100 | -> | Plus |
| 2L | 16237510..16237886 | 1763..2139 | 100 | -> | Plus |
| 2L | 16232080..16232234 | 23..177 | 100 | -> | Plus |
| 2L | 16235620..16236949 | 178..1507 | 100 | -> | Plus |
| 2L | 16237134..16237310 | 1508..1684 | 100 | -> | Plus |
| 2L | 16237368..16237445 | 1685..1762 | 100 | -> | Plus |
| 2L | 16238155..16238660 | 2289..2794 | 100 | -> | Plus |
| 2L | 16238728..16238970 | 2795..3037 | 100 | -> | Plus |
| 2L | 16239042..16239135 | 3038..3131 | 100 | -> | Plus |
| 2L | 16239202..16239623 | 3132..3553 | 100 | -> | Plus |
| 2L | 16239813..16239920 | 3554..3663 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:06 Download gff for
BO32642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16232080..16232234 | 23..177 | 100 | -> | Plus |
| arm_2L | 16235620..16236949 | 178..1507 | 100 | -> | Plus |
| arm_2L | 16237134..16237310 | 1508..1684 | 100 | -> | Plus |
| arm_2L | 16237368..16237445 | 1685..1762 | 100 | -> | Plus |
| arm_2L | 16237510..16237886 | 1763..2139 | 100 | -> | Plus |
| arm_2L | 16237951..16238099 | 2140..2288 | 100 | -> | Plus |
| arm_2L | 16238155..16238660 | 2289..2794 | 100 | -> | Plus |
| arm_2L | 16238728..16238970 | 2795..3037 | 100 | -> | Plus |
| arm_2L | 16239042..16239135 | 3038..3131 | 100 | -> | Plus |
| arm_2L | 16239202..16239623 | 3132..3553 | 100 | -> | Plus |
| arm_2L | 16239813..16239920 | 3554..3663 | 98 | | Plus |
BO32642.pep Sequence
Translation from 16 to 3679
> BO32642.pep
MFGLCEKLMTHFAVILTAFSFSQPLLLLLICGPHGGTFPSTSIHWAEASA
ADEAVGKWATQFGDELFALAQKITKSQEIKEKYKEYNARVELKNGTELIK
SITKNVGRMLARKMDAVRCIQERAEYVNENFEFNLTYALQNFTYFSSKYS
TFNGNSSEELEPNEAEFAWMYRNMELNPDTHFYNTPVDTEHSSVHVPSNI
WDRSERVLKTIMWSEHLDEVFRQNYQSDPALSWQYFGSDTGILRHYPAAQ
WTDTRPNRDDADTYDCRKRSWYIETATCSKDIVILLDHSGSMTGFRHHVA
KFTIRSILDTFSNNDFFTILRYSSEVNDIIPCFNGALVQATPENIEVFNQ
QIEQLDDPEGYANLTLAYETAFQLLRKYYDSRHCVTNSTCNQAIMLVTDG
VAGNTTEVFQKYNWGNGENGTSQMDTRVFTYLLGKEVTKVREIQWMACLN
RGYYSHVQTLDEVHEEVLKYVDVIATPLVLQNEQHPPTWTHAFTDKTYDP
KTSNEKRPRLMISVGVPAFDRFYRHANSTNPRARLLGVAGTDVPVEDIDK
LTLPYKLGVNGYSFVVSNNGYVLLHPDLRPIGTNGKMNPNYNSIDFTEVE
HLFEDQSPREPGESILHIRNAMVRHEANEFKSISVKFHYDKMRRVSEEKQ
DYFFAPLPNTPFTLGIVMPSEYGKTWIKVGEEVDKNKHMKINISDFFIGE
NWKVHPDWVYCKYHYLEGHEFKTPEAELREFLAKMQNDWKWSEQYAEDES
DWDDKDDLNCGRKTLGDDAYYCNKELVNLLIFDAKVTNSSYGVWRFESDE
ERQLIERFRADLRFVATMSGLTRWQFIFGEVEVDTDREFGDYHTTAIDET
WYKSAILQHHEDRAESFVYSVKYYDDPMEDSEVKVTASHAIFPRDGGKEA
PACVVGFQFSHARMWERFFNITAVDHCNHCLPICTDDDVDCVVIDNNAYI
VIGQNINTTGKFFGEFHGDVMTAMVERGIFLSIEVYDYQEQCKEEPKAGS
DGHGLLHPLRLLSLGWKYLVGRLFFEYQRIQWWADGAPFMEYTDEIEDEY
VAVGDGGKSSASKPKDDSDDENAMFDEPEPDPIYKACDKRSTLYALQPSA
LVGINDFVEAPSTRPFLVKKIPNSNLVLVVVNVLMPSRSVRLTTEPQRME
YDKEFPCYKLNMSFYERRRIEECYTVHEDEELYTYCGNASRLVLTLQLMP
LTIILVFYLTHSFMRASFLDH
BO32642.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:12:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42817-PB | 1215 | CG42817-PB | 1..1215 | 1..1215 | 6550 | 100 | Plus |
| CG42817-PA | 1215 | CG42817-PA | 1..1215 | 1..1215 | 6550 | 100 | Plus |
| CG4587-PO | 1260 | CG4587-PO | 39..1256 | 55..1206 | 1496 | 31.7 | Plus |
| CG4587-PN | 1260 | CG4587-PN | 39..1256 | 55..1206 | 1496 | 31.7 | Plus |
| CG4587-PM | 1260 | CG4587-PM | 39..1256 | 55..1206 | 1496 | 31.7 | Plus |
