Clone BO32646 Report

Search the DGRC for BO32646

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:326
Well:46
Vector:pDNR-Dual
Associated Gene/TranscriptCG8920-RD
Protein status:BO32646.pep: Imported from assembly
Sequenced Size:2929

Clone Sequence Records

BO32646.complete Sequence

2929 bp assembled on 2012-07-27

GenBank Submission: KX794299

> BO32646.complete
GAAGTTATCAGTCGACATGGAAAAGCAGGAGGTCCTGGAATACGTGGCCA
AGGTGGTCAGGGCCCTAATCACGTCAGCTAAGCCGCCGGTTACGCTGCGG
TCCATCGTCGCAGATTACATGGAGATTGAGGGTGAGCCGATACCCTTTCG
CAGGCTGGGCTACTCGAATGACCAAGAGCTGCTTAAGGATTCGAATCAAT
TCAACTTTCACCAAAGCGGTAATCAGGTGTTCATCACAGCGAAGTATAAC
GCTAACACAGAACATATTGTGCGTATGGTACGTCAGCAGAAGACCAGCAA
GTCCACAAGCTTATCGAAGCCCACTCCAATTGCCCAGAAGCCCAAGCCAA
TTGCCCAGAAGCACACTCACGGCAATAAGTACCACTACCAGCAACGGAAT
AAGCAGCCGAATCATCAGCCGGATCAAGAAATAGGAAGAGCAGCTAAGTG
TGAGAATCAGGCTATAGCCGAGCATAAACAAGATCTAACGGGCATCATAA
CCCAAGAGCTGTTTGAAAGTTTCAATAATATTCAAGGTCCGTTTTCGGAA
AACCTGCAGGTTTTCAACAAAAATCCAGAATATATCACAAGGCGAAAGAA
AGAGCTTAAGAAAGAAGACGATCTAGATCGTGGTCAAATAACGAAGGAAG
TCGCTAGGGAAAAACAGAAGGAAAAAGAAACCCGCGATCGGGCTGTGACG
GAAACGATCTTCGTAACAATTGAGAACAAAAAGGCACCAGTCATGAATGG
ACATGGACCAAGGCACGTTAAAGTGGCTAACGGACAAGACAAACACAATG
ACGGCAAACCTCCGCTGCGTGCCATACTGGGCAACAGTGCTTCGCAGCGC
CAGCAAGATACAAGCACCGTCTATCACAGCCCTGAATCCTCATTCAAGCG
GCCACGTCATCCGCGAGTAATGTACCCTGGTCACCAGCGCACCACGGGCG
TCTCTGTGAATCACAGATTGAAAGTAACGCCGCAATCGGATGCACCCACG
CCAGCGGTAGCGCCCATCACGCCGCCAGCTTCGCCGGAATACGCTCAAAC
GACAACCGCCGCTAAAGCGACGTACAAAGAAGATATCCACGGAGGTCAAG
GTGAAACAGGCAATGTCGTTACAAATCCAAAAGTTAAGGTGCCACTTAAA
TTCGATCCCTCACTTGATCCCGTCTCCACGCTCAACTTCTATTGCGCGGC
AAATGACTTTGAGAAACCTGCATACAACATATTCAACAAGCTACGGAACC
TACATTGTTCAGTGCAAATCGCTGGCGATGTTTACAGTAGCTATCCGCAG
GAGTTCACCGATAAGGAGACAGCATACCAACGCACAGCACAGATCGCCAT
CCAGCGCATCATGCATGCCCAGTCACACCAAAAGCTTTCTGCTTGCACAT
TTAGCGATGTGGAGTTTATCGATGGATTGTACAAGGAGCTGTTAAAGCAC
CCACATGGCATATTGGGTCACAAGCTGGAGGATTGGTACGGCAGCACCTT
CCGGCAACATCTGCCCAGTCATTGGTACGATTTGATCGTGAAGTCAAATA
AAATTCGTGTTGAGCACGGCATTGATCCAAGGATCATATTGTTTGCCAAC
GATCCTGGTTCATCGGAGCCGGACCGCACCAGCATAACCACCCTGCCACA
GATGGTGCTGCCGTGGCAGTCAAGCGAAGGAGGATCGCACGACTGGAACA
TGTTCATCAGCTTCTGCGACTCCACCAAGATAGTGTGGGCTCGGATGATC
GATCAGATCGCAAACTTTGAGGAACTGACGAAGCATATTGGACGCCAAAT
GGAGTCTCCGCATTTCCGACAAAAGGTCTCTAAACCTTACGCTCAGGAAG
TCTATTTAGTGGAGATGCCCGATGGCTGGAATCGTGTTCGTGCAATTTCT
GTGGATGAGGAGACCCGCTCGGGCCGTTATCACTTTATCGACTTTGGCGA
TGTGGCAATGTTTCATTCAGAAGATCTCTTCCACTGTCCACCGCAGTTCT
TGGCGCTCCCGGCCCAGGCCGTGTGCCTCAGCATGTATGCGTTGGATAAG
TTCGAGGATCATCCGCACGCTCTGCAGGTTTTAACAAAGGAGCTGGACGG
CCAGACGGTTGTGGCCCATGTGCTCACCACGGAGAAGCAGTTCCTGGAAC
TGGGTGGATCTGCCCAGGGTGTGGTGGAGAACGGTAAGCGTCGGGCGTGC
TTGGTGGCCACGCTGTACGACACCTCAACGGCTGAGGACATTCATCTGAA
CGATCTGGTTGCGAAAAGAATAACGAAGTGCACGCCGGCACCATCGCTGA
GTGATGAAAAGAAGATCGGCAAGACCACGCCCATTCTTGTGTCTCACATC
AACGATGATGGTGATCTAATGGTGCTGCTACGCAATGATGACCTTAAGTT
TGTGGAGCGCAGTATTGCGCAAACTGTGGCTGATTTGGGCGAGCAGGACC
GAGTGAGCTATTCGGATCTGCTCCACGACCGCCATATATTCGTGTGCGAC
GAGACTGTCGATGGCGTCAAGCAGTGGTTCCGCGGGCGACTGGTCACCAG
ACCACTGAATCCGGACGAAGAGTCCTTCGATGTCTACTACGTGGACGATG
GACGGCAGCGTAAGGCGCACATCTCTAATATCTACCGCCTGGAGGCAAAC
AACAGAGCTCTGGCTACGTTCCCGCCACAGGCGATACCCGTTCGCCTGCA
CGACGTTCCAGAGATCGGAGGTCATATGCTTCATCGCCTGCGTGGTCTGA
TACCTTGGCGCACCGAAGCTCTCCTGAAGGTTGTGGCCATGGATGGTGGT
AAGCCTCTGGTAAACGTATTCATCCGCGAGGATCCGGAGTCCATGTATAT
GTGCGTGAACATTGGCCTTCGCCTGGAGCTCGAGATGGCTAGCTCCCTAA
ACAACGACATCGCAAGCTTTCTAGACCAT

BO32646.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:49:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG8920-RD 2898 CG8920-PD 1..2895 17..2911 14475 100 Plus
CG8920-RB 3669 CG8920-PB 1..2880 17..2896 14400 100 Plus
CG8920-RA 2640 CG8920-PA 1..2637 275..2911 13185 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:49:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG8920-RD 3272 CG8920-RD 177..3071 17..2911 14475 100 Plus
CG8920-RB 4005 CG8920-RB 177..3056 17..2896 14400 100 Plus
CG8920-RA 3079 CG8920-RA 194..2878 227..2911 13425 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:49:06
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20321675..20324224 224..2773 12750 100 Plus
2R 25286936 2R 20319813..20320024 17..228 1060 100 Plus
2R 25286936 2R 20324293..20324411 2774..2892 595 100 Plus
Blast to na_te.dros performed on 2014-11-28 11:49:07 has no hits.

BO32646.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-27 17:05:53 Download gff for BO32646.complete
Subject Subject Range Query Range Percent Splice Strand
CG8920-RE 198..3092 17..2913 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:05 Download gff for BO32646.complete
Subject Subject Range Query Range Percent Splice Strand
CG8920-RD 177..3071 17..2913 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:51:53 Download gff for BO32646.complete
Subject Subject Range Query Range Percent Splice Strand
CG8920-RD 177..3071 17..2913 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:51:53 Download gff for BO32646.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20319813..20320022 17..226 100 -> Plus
2R 20321678..20324224 227..2773 100 -> Plus
2R 20324293..20324411 2774..2892 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:05 Download gff for BO32646.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16207318..16207527 17..226 100 -> Plus
arm_2R 16209183..16211729 227..2773 100 -> Plus
arm_2R 16211798..16211916 2774..2892 100 -> Plus

BO32646.pep Sequence

Translation from 16 to 2929

> BO32646.pep
MEKQEVLEYVAKVVRALITSAKPPVTLRSIVADYMEIEGEPIPFRRLGYS
NDQELLKDSNQFNFHQSGNQVFITAKYNANTEHIVRMVRQQKTSKSTSLS
KPTPIAQKPKPIAQKHTHGNKYHYQQRNKQPNHQPDQEIGRAAKCENQAI
AEHKQDLTGIITQELFESFNNIQGPFSENLQVFNKNPEYITRRKKELKKE
DDLDRGQITKEVAREKQKEKETRDRAVTETIFVTIENKKAPVMNGHGPRH
VKVANGQDKHNDGKPPLRAILGNSASQRQQDTSTVYHSPESSFKRPRHPR
VMYPGHQRTTGVSVNHRLKVTPQSDAPTPAVAPITPPASPEYAQTTTAAK
ATYKEDIHGGQGETGNVVTNPKVKVPLKFDPSLDPVSTLNFYCAANDFEK
PAYNIFNKLRNLHCSVQIAGDVYSSYPQEFTDKETAYQRTAQIAIQRIMH
AQSHQKLSACTFSDVEFIDGLYKELLKHPHGILGHKLEDWYGSTFRQHLP
SHWYDLIVKSNKIRVEHGIDPRIILFANDPGSSEPDRTSITTLPQMVLPW
QSSEGGSHDWNMFISFCDSTKIVWARMIDQIANFEELTKHIGRQMESPHF
RQKVSKPYAQEVYLVEMPDGWNRVRAISVDEETRSGRYHFIDFGDVAMFH
SEDLFHCPPQFLALPAQAVCLSMYALDKFEDHPHALQVLTKELDGQTVVA
HVLTTEKQFLELGGSAQGVVENGKRRACLVATLYDTSTAEDIHLNDLVAK
RITKCTPAPSLSDEKKIGKTTPILVSHINDDGDLMVLLRNDDLKFVERSI
AQTVADLGEQDRVSYSDLLHDRHIFVCDETVDGVKQWFRGRLVTRPLNPD
EESFDVYYVDDGRQRKAHISNIYRLEANNRALATFPPQAIPVRLHDVPEI
GGHMLHRLRGLIPWRTEALLKVVAMDGGKPLVNVFIREDPESMYMCVNIG
LRLELEMASSLNNDIASFLDH

BO32646.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:12:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG8920-PD 965 CG8920-PD 1..965 1..965 5091 100 Plus
CG8920-PB 1222 CG8920-PB 1..962 1..962 5068 99.8 Plus
CG8920-PA 879 CG8920-PA 1..879 87..965 4654 100 Plus
CG8920-PF 1136 CG8920-PF 1..876 87..962 4631 99.8 Plus