Clone BO32654 Report

Search the DGRC for BO32654

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:326
Well:54
Vector:pDNR-Dual
Associated Gene/TranscriptCG12877-RC
Protein status:BO32654.pep: Imported from assembly
Sequenced Size:3007

Clone Sequence Records

BO32654.complete Sequence

3007 bp assembled on 2012-07-27

GenBank Submission: KX795328

> BO32654.complete
GAAGTTATCAGTCGACATGCTGCCATCCACGGGTCTCTTTAAGGGCTTCT
TGTGCCCTTACTTTGACGGCCAGGATGCGGCGTCCTGCAAGCGCCCCTTT
TGCCACTTTAAGCATGCTCGCAAAGACGAATTGGAGGCCGCTCCACCTGC
AGAACCTTCCCCCGTGCCCAAGTACAAGCCGGCACCCAAGTTGCTCTCCC
TTCCACTGCCCCAGATCACGCTATGTGCGCCCCGGAAGAAGTCCAATCTG
GAGTACCACCCGGAGAAGCCGGCTCTTGACGCATCGCCGGCTAAGAAGAA
GCAGGAGGCGTCCGTGGACAGTGCTCCCAAATATGTGCCCGGCCAGCCAT
CTGTTACAAATGGCGAAGAATATGACGATTGGCAGGCGGTACTCGAAAAG
GAAATTGATGAGCAGATGCAGGTGGAGATTGAGGAGCAAGTCCAGAATAA
CGACGAAGAACAGAAGATAGATACGGTAGCTGAAAACGAGGAGGACCAGG
AGAATACGCAACTGACGGATGCTAGGGATAGCCACGAAAAGGATCGAAAG
CCCAGCAAGGAGCGGGAAAGGGATATAGAAAAGAAGAAGATCAGAGAGCT
GAAAAGGGAAAAGATCAAAGACAGGGATCGGGACCGGGACCGGGACCGGG
AAAAAGACAAAGAGAAGAGCAAGGAAAGGGACAGAGAGAAGGAAAAAAAT
GATAGGGATAAGCGAAAGTCCTCCCACAGCGACAAGGAGCGCTCCAAGGA
GCGAAATACTTCAAGCTCAAGTTCCTCTAAGCACAAGTCTTCATCTAGCT
CCTCTTCCAGCAAAAAGTCATCCAGCAGCGATAAGCACCGCGACGACAAA
AGTTCCAGTAGCAGGCACAAGAGCAGTTCTTCATCATCCTCCTCGAAGAG
CCATCATCACAAATCTAGTTCCTCGAGTTCACGGTCCAAAACTAAGAGGA
GCTCGTCTTCCAGCAAAAGCGCTGGCACTTCAAAGAGCGAACCGGAGGCG
GATAAGGATACTGAAGCAGCTGTACTGACACCAGCAGAACCTATGGATGA
TCTGGATGACATGGACTTTGATTTTGAAGCAGACACCTCGGAAGGAGAAA
TTGTACGCCAGTGTGAAATGATTTTTGACGAGATGGAAAAAAAATTTGCG
CAGATGCACAAGGACGAAGGCGGCAATGCCAACCCGGAGAGTTCTCGCAA
GCGCAAAGCTCCTTCTCCGGACATTGATACCTTCACCGAGGCAGCCACGG
CGGCTCTGCAGAAGCGCCGGGTGGCCCACGAGAATGCTGACAAGATCACG
CCTCATTTGGCTCCTTCGGCGGCGATGCGCAAACCCAATCACGTCCGTAA
TGCCATGCAGGCGATCTTCAACCGCCGCGCGGAGCTGCGGCGCCAGGAGA
AGCTACAAGCCGAAGCCTCAGCGGAGCAGGTACGTCAGGCACAGGAGCGG
GTGCGCCAAGCGCAGGAGGAGCTCCGTCAGGCCAAGGTCAACTCCAACCT
CACGCCACTTATTTCGCGAAGTGCTCTGACCCCACCAGTGCGATCAGCTC
GCAGCATAGCACCTGTGGCCAACATTGTGGCCATCGCTCGGGCCAAAAAA
AAGATCGAGGAGCTGCAGGCCGAGAAGAAGCCAGCCTTTACGCCTGCACA
ATCATTCAAGGGCGCCGGCCGTGTGGCTCACAAGCCCACTGCTGCGCTAG
ACAAAGCGGCTCCTGTGTCCAACGCGGAGAAGCCAACCGTCCTAGATCCC
AGCAGCTCCAAGATATCATACAACGTGCGCATTCAGTATTATGAGATGAT
GGTAAGGCACTGCACCGTCATCTATCCGCAGCTGGCAGATGCCTGGGAGC
GCGCCCAGGTGGAGGAGTTGACCGTCTTTAAGAAGTGCAACACGCCTGCC
ATCTACAAGAACAGCTGCATGCTGGCGATTAACAAGCTCCGCAAGGAGGC
CTTAGAGGCGGGAAACAAGCCGAGCGTAGCCTGCAAGACTGTGTCGCACG
AGATGATGCTGGGCGGCAAGCGGGCGCTCACCACATCCTGGAGCGTAGAG
AAAAAGGGAAAACTGAGCTCCTTGGGCAATGGCGAACCTTTCGATGCTTT
AGACGCCGAGAAAGCTTACAAAATGGTATTCGATCTTCGCCTGACTGAAG
AGCAGCTGGTGGAGAACGGATATCCGCGTCCGGGCGATAAGCGCGGATCC
GCAGTGATACGCGCCTGCCGCCCCAACCGTCGTCCCAACCAGAAAGAGCG
CTACTGTTCCCGCTGCGGCAAGGTATTCAGCTTGGACATATACGAGCACC
AGAGCTTTGACATGTGCAACTACCATCCGAAAAGCACGGGATATCGACGA
GGATTCACGGACCACCAGCATCGCTGCTGCCAGCAGCCGGCGGGCACTCC
AGGCTGCACCTATGCCAACTACCACGTCAGCGACTATTACGATCCGGAAA
AGCTCACCTGTTTCGTGAAGACGATCGAACGGGGTGAGGAATTTGTGCCC
ACTAAGAAGGACATATATGCACTGGATTGCGAGATGTGTTATACCACACA
CGGAATAGAGCTAACCCGCGTTACGGTGGTGGACATAAATGGACGCAGCG
TTTACGATGCTCTTGTCAAGCCGGACAACCAGATTGTGGACTACAATACG
ACCTACTCGGGCATCACGGAGGCGATGCTCTCCAATGAGACGCGTACCAT
ACGCGACGTTCAGGCGGTGCTGATGTCCATGTTCCATGCCAAAACCGTGC
TCGTTGGCCACAGTCTGGAGAGCGATTTGAAGGCACTCAAACTCATTCAC
GACGTTGTGGTGGACACATCGGTGCTGTTTCCCCACAAGATGGGACCGCC
AAAGAAGCGAGCTCTGAAAACACTGTGCATTGAAAACCTAAAGCGGATTA
TACAGGAGAGCGAGGCTGGCCACGACAGTGCCGAGGATGCTGAGGTGTGC
ATTCAGCTCATCAAGTATTATCTGCGCAACAAAATCAGTGCAAGCTTTCT
AGACCAT

BO32654.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:50:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG12877-RC 2976 CG12877-PC 1..2973 17..2989 14865 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:50:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG12877-RC 3250 CG12877-RC 111..3083 17..2989 14865 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:50:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27707375..27708798 124..1547 7120 100 Plus
3R 32079331 3R 27709625..27710219 2058..2652 2975 100 Plus
3R 32079331 3R 27708854..27709367 1545..2058 2570 100 Plus
3R 32079331 3R 27710277..27710536 2653..2912 1300 100 Plus
3R 32079331 3R 27707210..27707318 17..125 545 100 Plus
3R 32079331 3R 27710613..27710690 2912..2989 390 100 Plus
Blast to na_te.dros performed on 2014-11-28 11:50:21 has no hits.

BO32654.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-27 17:06:02 Download gff for BO32654.complete
Subject Subject Range Query Range Percent Splice Strand
CG12877-RC 109..3081 17..2991 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:27 Download gff for BO32654.complete
Subject Subject Range Query Range Percent Splice Strand
CG12877-RC 111..3083 17..2991 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:52:13 Download gff for BO32654.complete
Subject Subject Range Query Range Percent Splice Strand
CG12877-RC 111..3083 17..2991 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:52:13 Download gff for BO32654.complete
Subject Subject Range Query Range Percent Splice Strand
3R 27707210..27707318 17..125 100 -> Plus
3R 27707377..27708798 126..1547 100 -> Plus
3R 27708857..27709367 1548..2058 100 -> Plus
3R 27709626..27710219 2059..2652 100 -> Plus
3R 27710277..27710536 2653..2912 100 -> Plus
3R 27710614..27710690 2913..2991 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:27 Download gff for BO32654.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 23532932..23533040 17..125 100 -> Plus
arm_3R 23533099..23534520 126..1547 100 -> Plus
arm_3R 23534579..23535089 1548..2058 100 -> Plus
arm_3R 23535348..23535941 2059..2652 100 -> Plus
arm_3R 23535999..23536258 2653..2912 100 -> Plus
arm_3R 23536336..23536412 2913..2991 97   Plus

BO32654.pep Sequence

Translation from 16 to 3007

> BO32654.pep
MLPSTGLFKGFLCPYFDGQDAASCKRPFCHFKHARKDELEAAPPAEPSPV
PKYKPAPKLLSLPLPQITLCAPRKKSNLEYHPEKPALDASPAKKKQEASV
DSAPKYVPGQPSVTNGEEYDDWQAVLEKEIDEQMQVEIEEQVQNNDEEQK
IDTVAENEEDQENTQLTDARDSHEKDRKPSKERERDIEKKKIRELKREKI
KDRDRDRDRDREKDKEKSKERDREKEKNDRDKRKSSHSDKERSKERNTSS
SSSSKHKSSSSSSSSKKSSSSDKHRDDKSSSSRHKSSSSSSSSKSHHHKS
SSSSSRSKTKRSSSSSKSAGTSKSEPEADKDTEAAVLTPAEPMDDLDDMD
FDFEADTSEGEIVRQCEMIFDEMEKKFAQMHKDEGGNANPESSRKRKAPS
PDIDTFTEAATAALQKRRVAHENADKITPHLAPSAAMRKPNHVRNAMQAI
FNRRAELRRQEKLQAEASAEQVRQAQERVRQAQEELRQAKVNSNLTPLIS
RSALTPPVRSARSIAPVANIVAIARAKKKIEELQAEKKPAFTPAQSFKGA
GRVAHKPTAALDKAAPVSNAEKPTVLDPSSSKISYNVRIQYYEMMVRHCT
VIYPQLADAWERAQVEELTVFKKCNTPAIYKNSCMLAINKLRKEALEAGN
KPSVACKTVSHEMMLGGKRALTTSWSVEKKGKLSSLGNGEPFDALDAEKA
YKMVFDLRLTEEQLVENGYPRPGDKRGSAVIRACRPNRRPNQKERYCSRC
GKVFSLDIYEHQSFDMCNYHPKSTGYRRGFTDHQHRCCQQPAGTPGCTYA
NYHVSDYYDPEKLTCFVKTIERGEEFVPTKKDIYALDCEMCYTTHGIELT
RVTVVDINGRSVYDALVKPDNQIVDYNTTYSGITEAMLSNETRTIRDVQA
VLMSMFHAKTVLVGHSLESDLKALKLIHDVVVDTSVLFPHKMGPPKKRAL
KTLCIENLKRIIQESEAGHDSAEDAEVCIQLIKYYLRNKISASFLDH

BO32654.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:12:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG12877-PC 991 CG12877-PC 1..991 1..991 5131 100 Plus
CG42666-PK 742 CG42666-PK 484..738 747..994 437 37.3 Plus
CG42666-PI 742 CG42666-PI 484..738 747..994 437 37.3 Plus
CG42666-PH 742 CG42666-PH 484..738 747..994 437 37.3 Plus
CG42666-PG 742 CG42666-PG 484..738 747..994 437 37.3 Plus