BO32669.complete Sequence
4606 bp assembled on 2012-07-27
GenBank Submission: KX796115
> BO32669.complete
GAAGTTATCAGTCGACATGTCGCGGTCGACGTCAAAAACGACGTCGCTGC
TTTGCGGCAGCATCATCATTTTCTTCGTCACCATCTGCGGCTGCTTGGCA
CAAGATACTTCCAGCTACTACTTCCCATCGCAAAATCGATTTGTGCCATC
ATCCGGTTCCTTTCCGCGCCCACAGCCGTCCTCGCTGAGTGGATTCCGTG
CCAGTTCCGGCGGATTCTCACCTTCGCCGGGCTCCTACCAGGAACAGCTT
CTGTTCATCGCCAACGAAAATGCCAAACAATCGCCAGCGGCGGCCAGTTC
GCAATTCGGAACTCCATTTGGAGGCAGTTCCCAGTTTGCGAAACCCAATC
GCCAGACGGACTATTACGATATCTCGCCACGCCCCTTTGGAGTGCCCTCG
GGGGCGGGACCAGCGGCATCGGCGGGATTAGGAGCGGCAGCGTCCACTGG
TGCCACGTCCGCGTCGGTGACCAATGGCTTCACACGCTCCAAGGCGATAC
GGAATGGATCGGGCAACAGCCTTGGTGGTGGATTCCAGCCGCAGACGCAG
CGCATCAATGTGCCCCACCAGCAGACGCAGTTTTTGGCCCACTTTAGCGA
ATCTGGGAACGAAAAGCGACCGGTGACCAGCAGCCGTCCATTTGGCAATG
GAGGATTCTCACCTACCCGAACTCGAACCCAGGCGCCGGTTTCGGCACTT
GTAGAAAATCCAGCCACTCCCGCAGCAACGGCTTTCAGACCACGTAATCG
CTATCAACCCGGCAGCTCCACTGCATCTACCACAACCACAACAACGAGTA
GTGCGGAGGTGAGCAGCAAGCGGTACAACCGATTTGGTAGCAATCGGGCC
AAAGCCACCAGCACCACCACCTCAACCACTCAGAACACACCCTCGGAACG
CCCGAGTTTCGGCAGGAAGTCACCAAATCCCAGGCGACCCGTTTTCATCA
GTCGCGAAGTCAACGAACCGGTGAGTGTGGTCAGCAAGCGACCATTCAAC
TACAGTGGAGCCAGGCTAAAGCTGCCAGCCAGACCCACCGCTCGCACCAC
CAGCACTACCGAAAGCGTCGAGGAGGAGGAGCCCCTGGATGACGAGGAGG
AAGAGGAGGAGCACGAGGGCAGTGATGAACAGTATGAAGAGGAATCCGAC
GAGGGAACCGAAGAACACTCGGAATCCTCGAGCTTGGAGAAGTTACCACT
GCAGGAGGAGGCCGTCACCCCGGTGACAGTGACCAAGAACGAGGCATTCG
CACATGTAGAGCCTTCCGAACCCACCACCAGTTCCGAAATAGATAATGAA
AGCAGCACGAGCAGCACTGAAGAAAGCCACACTGATGTATCTGAAGTAAC
CAACGGCGATGCAGAGGTTAGCAACGATGAAAATGATGTCACCACCCTAC
ACCCAGCTCATGAGGAGGAAATCGTAGACGAACCCACCACTATTATTCCA
CAGGAGAATCAATCCACGGAGGATGCTCATGTGGATGAACAAACCGTAAC
CACTGAACAGCCTTTGGATAGCACCTCCAAAACGGAAGAAACCGAGAACG
TATCCAAACCAGAGGAGACCAAGACATCGAAGCAAGAGGAACAGAGCGCA
TCAAAATCAGAGAACCAAAGCCTTAACAAGCAGGAGGAGCAATCCGAGTC
CCAGTACGATGATGAAGGGGAGGGTGAGGACTATGAATACGATGATGAGG
AGGGTAGTGAAGACTCAACCAGCGAAGTGGAGAATCAAGACTCCAAGCCA
TCCACGCCCAGTGCGGAGCATAAGGATGATCGCGAAATCATTTCGGTGGT
AACCACCAAGAGTGTGGTCAATGGATCCACAATTCTACCAGTGCCAGTTA
CTCCAAGCACCAACTTTATAACTGAGGAGGAAGTTGAGTCTTCCCACGCT
GATCTCAAATTGGAAACTACAACATCCATGACCTTGGACGAAGAGAAAGG
CCCGAATGCTACTGAGAACTATGTGGTTGTGGCCTCTATCCAACCCAGTC
GTAGCATCAATGGAGCCCGGTTCTTACCTTTCCCCGCCATTGAGCAGGAA
GAGACGAAACAGACACTATCTGAACTGGAGCGGAAAGTGCATTCCAAACA
GCAGCAGACCCCAGCTCAAAAGCAATCGGAGGGCAGCGAGGAGGTGCAGG
CCAGCTCCTCCATCCAACCTCCGGTAGTTTCCTCCACGGAGAGTATCATT
GACAAACTGGATCGTGTGCAGTCAGAGCTGTCCAGTGGCTTGTTATCTGG
CAAGTACCCCATCATCAGCCAGATGGACTCCTCCACACCAGCAACTAGCA
CTACTGTGGGTACAGGTCCCGGAAAATTTGTGCCCCACATCAGGAAGTAC
CAACCAAGAACCACATCATCTGCTCCGCGAACAACCAGCAGCAAGGTGAA
AGTGCAGCATTTCGATGACGGAGAAATGGACGAGCTGGCCACCCTTCTCC
CTGTGGGCTTCAAGCCCAGACCGAGCTATAAGAATCGCAAGATTACGACA
ACGACCTCTACCACAGAGGCGCCGCCAGCTGAGATATCCAAACAGAAGCC
GGGACGCAACTCCACCATCAGTCGATCGTTTAAGAGCGGTCACGTAACCG
TGCAGGATGTGGCACAGGCTGGACTACTGCCCAAGGGCTATAAGCCACCA
AAGACTACAACTACAACGACGACAACCGAAAAAGCGGAGGAGAGCAATCC
AAATTCTTCCTCTGGACTCGAAAGTCTCTTCAGTGAAATCCAATTCGACG
AAAACTTGGCCTCCCTGCTGCCCAAGGACTACAAACTGAACAGTAGTCCC
AAGCTGCAAGTGAACACCACCACTGCCACTCCGTCAACCACTCAAAGGAA
TTTGCCAGTTGCAGTGCCTTTCGATGATCTTAGCACGTTCCAGTTGCCTC
CTGGATATAAGGCTCCCGAGCCCAAGGATGAACCTAAGCTGCCACCAGGT
GTGACTCCCATTAAAATAGATTCGTTGAAAGACCTGCTACCTCCTGGATT
TAAATTGAATGTAACAGAGAGCGATGCTAGTGACGAGATTCCTGCCTCCC
TGCTTCCACCTGGCTACAAAGCCAAGAAACAGCATCCGGCCTCAACCACC
ACCACCTCTACAACAACGAGTAAGCCCACTGTGTCGGCTTCTAGCACCAC
TGAAGCAGCTGTCACGGAAGCTTCCGGAGGAAGTGGCTTTAAGGTGGTAT
TCCCAAAGGGTAACCACAAAAGATTGGGTGCCCACCGCCTGACAACACCT
CATCCTTCCGGCGAGGAGGGAACTACTGCGTCCTCGAGCTCAAACCTGCA
AGTGATGATCAAAAAGGGCCCACCAACCAGGGCCACCACCGAGTTCACCG
GCTGGCCGACTCCGCCGACCACTCCGCTGTCCATTGACAAACTGAACGCA
CAGACCATAAACTTTGAGGATCTGTTGACGGCTAGTGGAACGAGTAGCAC
GACAAGCACTACCACAACTACGACAACTACAACCACAACGACTACTCCAC
GACCCACAAAACCGGGTCATTGTACCGCCGACTGCGACTTGGCTGCTACC
ATTAAGATCATCGATGGTGTGGCATGGAAACCAGAGCTACTTGATCACAA
CACCGTGGAGTGGAAGAATCTGGCCCACGAGCTGGAGGCACAGCTCAACG
AAGTTTATTCCGGAGCTCCTCAGCTCAACAAGTGGTATAAAAAGGTGCGT
ATAGATAGCTTCAGCAAGGGCAGCGTCCTAGTCGACTACTATGTGGAGCT
CGCCAACATAACCGAGGATGTGGATACCCTGGAAATCCGTCAATTGTTCC
ACGATGCCCTGTCCAAGCCAGCTACTCCAGTTCTACCCGATAAGGATGCG
CAGGAGAATGAGACGGATAGCGTCTCGGGACCGCAGGAGGAGCAGCTGGT
AACGGCCAGCTATCAGATGGGCAAATACATTATTGATCCGGTGGCGACAG
ATTTTAGTGTCATAGCCAAGAATGCTCATACTAATGTGGAGTTCGCAGAG
GAGGATCTGCTTATTCCACAATGGGCCATTGTGGTCATAGTGATTGGAGT
AGGCTCCCTGGTGTTTGTAGTCATTTTTGGGGTCACAGTGTTGCTCAACC
GTCAGAAGAGGGCCAAGAAGACCCCCATTCCACTGACCAATGACATGCTA
AACGAGCTAAAGGTCAACCACATGGGTGGTGCGGACAACTATGGCGTGGA
TGATTTCTATAACATCGACGATCCTTGGAACGATACCAAGCAACCTATTA
AGCCGAAGCGCTTCACCAACTCAATGCACGGTAGCAACAGTTCCAACATC
TACGACAGTTGGCGATCCACCAGGCATCCGCACACCAGCGGGGATTACTT
CTATGACCAGCAGCCAACCTATTCCCAGAAAGGAGACTCACTGAAGAGGC
CGCAGCTCCACCATGGTAACCACAGCAGTCACAGAGAGTACCCCGCCCAC
CACCACCAGGCGTCACAGCAGCACCAGCAGGCGTACGGTCACCAGTATCC
AGATGCCTTCGCCGATGCCCACCAGATGTACAGCTACAACAACCATGCGA
GTCGGACGCGCTATTCCCGCGACTATGATCCCGATTTTGCAAGCTTTCTA
GACCAT
BO32669.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:49:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10936-RA | 4575 | CG10936-PA | 1..4572 | 17..4588 | 22860 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:49:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10936-RA | 5377 | CG10936-RA | 401..4972 | 17..4588 | 22860 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:49:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17606551..17609587 | 3643..607 | 15185 | 100 | Minus |
| 2R | 25286936 | 2R | 17605356..17605687 | 4588..4257 | 1660 | 100 | Minus |
| 2R | 25286936 | 2R | 17606165..17606483 | 3959..3641 | 1595 | 100 | Minus |
| 2R | 25286936 | 2R | 17611315..17611582 | 607..340 | 1340 | 100 | Minus |
| 2R | 25286936 | 2R | 17614900..17615137 | 340..103 | 1190 | 100 | Minus |
| 2R | 25286936 | 2R | 17605745..17605913 | 4258..4090 | 845 | 100 | Minus |
| 2R | 25286936 | 2R | 17605975..17606106 | 4090..3959 | 660 | 100 | Minus |
| 2R | 25286936 | 2R | 17637224..17637311 | 104..17 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:49:17 has no hits.
BO32669.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-27 17:05:54 Download gff for
BO32669.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10936-RA | 397..4968 | 17..4590 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:08 Download gff for
BO32669.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10936-RA | 401..4972 | 17..4590 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:51:58 Download gff for
BO32669.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10936-RA | 401..4972 | 17..4590 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:51:58 Download gff for
BO32669.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17605975..17606105 | 3960..4090 | 100 | <- | Minus |
| 2R | 17605353..17605685 | 4259..4590 | 99 | <- | Minus |
| 2R | 17605745..17605912 | 4091..4258 | 100 | <- | Minus |
| 2R | 17606165..17606480 | 3644..3959 | 100 | <- | Minus |
| 2R | 17606551..17609586 | 608..3643 | 100 | <- | Minus |
| 2R | 17611315..17611581 | 341..607 | 100 | <- | Minus |
| 2R | 17614900..17615135 | 105..340 | 100 | <- | Minus |
| 2R | 17637224..17637311 | 17..104 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:08 Download gff for
BO32669.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13493480..13493610 | 3960..4090 | 100 | <- | Minus |
| arm_2R | 13493670..13493985 | 3644..3959 | 100 | <- | Minus |
| arm_2R | 13492858..13493190 | 4259..4590 | 99 | <- | Minus |
| arm_2R | 13493250..13493417 | 4091..4258 | 100 | <- | Minus |
| arm_2R | 13494056..13497091 | 608..3643 | 100 | <- | Minus |
| arm_2R | 13498820..13499086 | 341..607 | 100 | <- | Minus |
| arm_2R | 13502405..13502640 | 105..340 | 100 | <- | Minus |
| arm_2R | 13524729..13524816 | 17..104 | 100 | | Minus |
BO32669.pep Sequence
Translation from 16 to 4606
> BO32669.pep
MSRSTSKTTSLLCGSIIIFFVTICGCLAQDTSSYYFPSQNRFVPSSGSFP
RPQPSSLSGFRASSGGFSPSPGSYQEQLLFIANENAKQSPAAASSQFGTP
FGGSSQFAKPNRQTDYYDISPRPFGVPSGAGPAASAGLGAAASTGATSAS
VTNGFTRSKAIRNGSGNSLGGGFQPQTQRINVPHQQTQFLAHFSESGNEK
RPVTSSRPFGNGGFSPTRTRTQAPVSALVENPATPAATAFRPRNRYQPGS
STASTTTTTTSSAEVSSKRYNRFGSNRAKATSTTTSTTQNTPSERPSFGR
KSPNPRRPVFISREVNEPVSVVSKRPFNYSGARLKLPARPTARTTSTTES
VEEEEPLDDEEEEEEHEGSDEQYEEESDEGTEEHSESSSLEKLPLQEEAV
TPVTVTKNEAFAHVEPSEPTTSSEIDNESSTSSTEESHTDVSEVTNGDAE
VSNDENDVTTLHPAHEEEIVDEPTTIIPQENQSTEDAHVDEQTVTTEQPL
DSTSKTEETENVSKPEETKTSKQEEQSASKSENQSLNKQEEQSESQYDDE
GEGEDYEYDDEEGSEDSTSEVENQDSKPSTPSAEHKDDREIISVVTTKSV
VNGSTILPVPVTPSTNFITEEEVESSHADLKLETTTSMTLDEEKGPNATE
NYVVVASIQPSRSINGARFLPFPAIEQEETKQTLSELERKVHSKQQQTPA
QKQSEGSEEVQASSSIQPPVVSSTESIIDKLDRVQSELSSGLLSGKYPII
SQMDSSTPATSTTVGTGPGKFVPHIRKYQPRTTSSAPRTTSSKVKVQHFD
DGEMDELATLLPVGFKPRPSYKNRKITTTTSTTEAPPAEISKQKPGRNST
ISRSFKSGHVTVQDVAQAGLLPKGYKPPKTTTTTTTTEKAEESNPNSSSG
LESLFSEIQFDENLASLLPKDYKLNSSPKLQVNTTTATPSTTQRNLPVAV
PFDDLSTFQLPPGYKAPEPKDEPKLPPGVTPIKIDSLKDLLPPGFKLNVT
ESDASDEIPASLLPPGYKAKKQHPASTTTTSTTTSKPTVSASSTTEAAVT
EASGGSGFKVVFPKGNHKRLGAHRLTTPHPSGEEGTTASSSSNLQVMIKK
GPPTRATTEFTGWPTPPTTPLSIDKLNAQTINFEDLLTASGTSSTTSTTT
TTTTTTTTTTPRPTKPGHCTADCDLAATIKIIDGVAWKPELLDHNTVEWK
NLAHELEAQLNEVYSGAPQLNKWYKKVRIDSFSKGSVLVDYYVELANITE
DVDTLEIRQLFHDALSKPATPVLPDKDAQENETDSVSGPQEEQLVTASYQ
MGKYIIDPVATDFSVIAKNAHTNVEFAEEDLLIPQWAIVVIVIGVGSLVF
VVIFGVTVLLNRQKRAKKTPIPLTNDMLNELKVNHMGGADNYGVDDFYNI
DDPWNDTKQPIKPKRFTNSMHGSNSSNIYDSWRSTRHPHTSGDYFYDQQP
TYSQKGDSLKRPQLHHGNHSSHREYPAHHHQASQQHQQAYGHQYPDAFAD
AHQMYSYNNHASRTRYSRDYDPDFASFLDH
BO32669.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:12:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10936-PA | 1524 | CG10936-PA | 1..1524 | 1..1524 | 7889 | 100 | Plus |
| Muc68D-PB | 1514 | CG6004-PB | 286..1307 | 143..1168 | 358 | 21.3 | Plus |
| Muc68Ca-PA | 3135 | CG18331-PA | 1064..2074 | 141..1160 | 316 | 21.9 | Plus |
| Muc68Ca-PA | 3135 | CG18331-PA | 654..1713 | 129..1160 | 312 | 20.8 | Plus |
| Muc68Ca-PA | 3135 | CG18331-PA | 171..1244 | 126..1174 | 306 | 21.2 | Plus |
| Muc68Ca-PA | 3135 | CG18331-PA | 736..1793 | 128..1160 | 302 | 21.1 | Plus |
| Muc68D-PB | 1514 | CG6004-PB | 204..1102 | 345..1165 | 294 | 20.9 | Plus |
| Muc68Ca-PA | 3135 | CG18331-PA | 1386..2351 | 128..1158 | 289 | 20.6 | Plus |
| Muc30E-PC | 1702 | CG33300-PC | 27..1178 | 101..1165 | 287 | 20.7 | Plus |
| Muc68Ca-PA | 3135 | CG18331-PA | 114..1034 | 213..1160 | 286 | 22 | Plus |
| Muc30E-PC | 1702 | CG33300-PC | 511..1438 | 219..1164 | 277 | 19.5 | Plus |
| Muc68Ca-PA | 3135 | CG18331-PA | 1241..2284 | 128..1174 | 276 | 20.4 | Plus |
| dp-PX | 14825 | CG33196-PX | 5594..6634 | 192..1170 | 270 | 21.6 | Plus |
| Muc68Ca-PA | 3135 | CG18331-PA | 1890..2935 | 135..1162 | 267 | 21.2 | Plus |
| Muc68Ca-PA | 3135 | CG18331-PA | 1466..2577 | 128..1170 | 261 | 21.4 | Plus |
| Muc30E-PC | 1702 | CG33300-PC | 576..1528 | 219..1165 | 258 | 19.9 | Plus |
| Muc30E-PC | 1702 | CG33300-PC | 641..1575 | 219..1161 | 257 | 20.1 | Plus |
| Muc30E-PC | 1702 | CG33300-PC | 316..1318 | 219..1165 | 256 | 19.7 | Plus |
| Muc30E-PC | 1702 | CG33300-PC | 446..1340 | 219..1164 | 252 | 19.7 | Plus |
| Muc68Ca-PA | 3135 | CG18331-PA | 1771..2764 | 126..1183 | 240 | 20.4 | Plus |
| Muc68D-PB | 1514 | CG6004-PB | 163..984 | 420..1163 | 231 | 19.7 | Plus |
| Muc30E-PC | 1702 | CG33300-PC | 840..1657 | 216..993 | 199 | 19.5 | Plus |
