BO32716.complete Sequence
1120 bp assembled on 2012-07-12
GenBank Submission: KX795019
> BO32716.complete
GAAGTTATCAGTCGACATGTCGGCGGCCCGCCTGCCCTACTATCAGCGGG
ATCAGGAGGACGGCCACCAGCGGCGCGCCGCACGCGGCCATCAGCGCGGC
TACTACGAGCGTGGCTCTGGTTCCGGATCCTCCAGACGAGAGCACAGTCG
CTACAGTCGCAGCCGTTCGCGTTCCCGCAGTCGCAGCCGCTCCGCCGAAC
GCTTTGGCCAGCGTCGCCGCCACCAGAAACGGCAGTCATCCCGTTACCAC
AGAGACCGCGACTCCAGAGATCGCTCCCGAGATCGCTCCCGAGATCGCTC
TAGGGATCGCGAACGTGATCGCGATAGGGACCACTCAAGGCGCTCCAGCC
ACTATCGACGCTCGGAATCGCCGTCCTCTTCTGACATTGGCCATGGATCC
AACAACAGTCAACGAAGAGGCCACCATGCATCATCATCCAGTAAATCGGA
GCTAAGCGCCGTACAGAAGGCAGCCGCTGCAGCTGCCGCCGCCACAAATC
AAGTCCAGTTGGCTGGCAAGAGCAGTGCCGCGTCCGCGGTGGGCGCCTAC
TACAACCTGGACACCGACGAGCCCTTTGACAAGGAGCGCATCCACCGCGA
AATGGAGCAGAAGCTGCGCGAAGCACTGGCCAGGGAGGGCAAAGTGTATC
CGCCGCCAAAGCCTGAGCCACCATCGCATCCTGTCTTCGCCAACGACGGC
TCGTTCATGGAGCTGTTTAAGAAGATGCAGGAGGGCCAAAAGCAGCAAGC
GACCAGCCAGTTGATGCAGCCATCGGTCAAAGAGGTCCTGCAGCAGCAGT
TGGTTCCGCCGGAGGCGGCCTCCACAGGGCCTGCACTGCCGGCCATTGCA
TTGGGAGCTGCCAGCAGTGCTGCGGCGCCGTACATTGCTGCCGCGGCGGC
CGGAAAGCTGGCGCCGCCGCCACCCATCGTGGGACGACGTCGCGGCGGAA
AAGTTCTCAAAACTGGCGTAGTGGCCAAAGTGAAGACGCCCAATGAGAGC
GACGTGGACCCGAAGGACTTCTGGTCGTTGTACCTGGCCGAGGTCAACAA
GTACAAGAGCAACGCCTGCGATACGGACAACGGCAAGCGGCCGCTGGTCA
AGGCAAGCTTTCTAGACCAT
BO32716.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:42:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18809-RD | 1089 | CG18809-PD | 1..1086 | 17..1102 | 5430 | 100 | Plus |
| CG18809-RC | 1089 | CG18809-PC | 1..1086 | 17..1102 | 5430 | 100 | Plus |
| CG18809-RB | 1089 | CG18809-PB | 1..1086 | 17..1102 | 5430 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:42:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18809-RD | 1783 | CG18809-RD | 135..1224 | 13..1102 | 5450 | 100 | Plus |
| CG18809-RC | 2557 | CG18809-RC | 909..1998 | 13..1102 | 5450 | 100 | Plus |
| CG18809-RB | 2006 | CG18809-RB | 358..1447 | 13..1102 | 5450 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:42:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19741783..19742872 | 1102..13 | 5450 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:42:40 has no hits.
BO32716.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-12 11:18:01 Download gff for
BO32716.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18809-RB | 365..1450 | 17..1104 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:31 Download gff for
BO32716.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18809-RB | 365..1450 | 17..1104 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:49:48 Download gff for
BO32716.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18809-RB | 362..1447 | 17..1104 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:49:48 Download gff for
BO32716.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19741781..19742868 | 17..1104 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:31 Download gff for
BO32716.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19635814..19636901 | 17..1104 | 99 | | Minus |
BO32716.pep Sequence
Translation from 16 to 1120
> BO32716.pep
MSAARLPYYQRDQEDGHQRRAARGHQRGYYERGSGSGSSRREHSRYSRSR
SRSRSRSRSAERFGQRRRHQKRQSSRYHRDRDSRDRSRDRSRDRSRDRER
DRDRDHSRRSSHYRRSESPSSSDIGHGSNNSQRRGHHASSSSKSELSAVQ
KAAAAAAAATNQVQLAGKSSAASAVGAYYNLDTDEPFDKERIHREMEQKL
REALAREGKVYPPPKPEPPSHPVFANDGSFMELFKKMQEGQKQQATSQLM
QPSVKEVLQQQLVPPEAASTGPALPAIALGAASSAAAPYIAAAAAGKLAP
PPPIVGRRRGGKVLKTGVVAKVKTPNESDVDPKDFWSLYLAEVNKYKSNA
CDTDNGKRPLVKASFLDH
BO32716.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:08:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18809-PD | 362 | CG18809-PD | 1..362 | 1..362 | 1858 | 100 | Plus |
| CG18809-PC | 362 | CG18809-PC | 1..362 | 1..362 | 1858 | 100 | Plus |
| CG18809-PB | 362 | CG18809-PB | 1..362 | 1..362 | 1858 | 100 | Plus |
| CG18809-PA | 362 | CG18809-PA | 1..362 | 1..362 | 1858 | 100 | Plus |
| Caper-PB | 594 | CG11266-PB | 42..163 | 24..144 | 187 | 38.9 | Plus |
