BO32718.complete Sequence
1537 bp assembled on 2012-07-12
GenBank Submission: KX799754
> BO32718.complete
GAAGTTATCAGTCGACATGTCGGGGCGCCTTAACCACCAGCACGCGGCGT
ATGCGCATCGCATGGAACAGGAACACAACCGGGTGCAGGCCACACAGGCA
GTGAACAGCTACTACAGCCATTGGGGTAAGGTCACATCACGCTTCGAAAA
CTGGACCAACAAAGAGTACTATGAGAAGGCGGATCAACAGCTGCAATCCC
GTCGCGATCAGCAGGAGAAGGAGGCAGCTCTTAATGAACGTCGGTCCAGA
CTTCGCCAGCTTCTGGCCTCGGAGAGCGAAGAGTACAACAACGAGATGGA
GCGACGTCGCCGGCCTCGGGAACCCGGTGGTGGAGACCTCCAGATGCTTG
ATCGGGTTAACCAGTCGCTTAAGGAGCAAGAGCAACTGCGTCGCAAGCTC
GAGATGGAAGCCAAGTTGTACGGCCGCTGGCGTCATGGCGTCGACGATGA
AAAGCTGCTCTACCAGTCCAAGTCGGACAACGAAGTGCTGGCCAAGCTCA
ACTGGCTGGACCGCCAGATCGAGAGTCAGCAGCAGCGCGAGGAGCAGCAG
GCCCTGGCCGCGGAGAGGCAGCTCCTGCTGCAGCAGGAAATCAGTCGCAC
GGAACAAGCTCAAAAGGAGCGCCAGCAGATCCGGGAGCAACAATTGCGCG
AACTGCGTGCTCTGCAAGAATCCCACATGTCCGAGCTTCGTCTGCGACAG
CAGGAGGCGGACAAGTTGAAGGAGGAGGAGCAGCACTTCCAGCTCTTCCT
GGGCGAACTGGACAAAGAGCGGGAATTGCTGGAGGAGAGCAGTGCTCTGG
TGCTCAAACAAGTCGATTCCGGACACGCCTTCAACCTCAAGAAGATTAAG
GTCTTCATCCGGCAGCGTAGTGAGGCCAGTCGGAAGCAGATCTCCCTGTG
CATCAACATGCTGCATCGCATGGCCAAGTATGTGGTCAAGACGGAGGAGC
TAAAGACCCTGCTGGACAAGTACCGCTCCCAGTTGGAGAACGAGGAACTG
GCCTGCGCCCAGATCGAAAGCATGTACGAGTCAGAGGCCAAGTACAACCT
ACAGCGCAGTGAGGAAAACTGGCGGGAACAGCACTTGCAGCGCTACGGAG
AGCTAAGCAAGTTCATTGACCAGGAGAAGGATTGCCTGGGCGCCATGCTT
CAGGAGAATGTGAGCCAGCAGCAGACATTGGTGGAGCTGAGGAGCCAACA
CCTGACTGGCATCGAGCAGGCCAACAAGCAGCTGGAGCAACTTAGCCAGG
TGCAGGCGGACGAGGTGCCGGCACCATCGCAAAGTAATCTCAAGGAGGTC
GAATCACAATCTTCAGTTTCCGAGACTTCCGTGGAGGAGAATCTGCTGCC
CAAGGTGAGCGATTCGTTCTCCAATCTGAACCTGGATGTGTGGAAGGATC
TGCCCCCAGCTCGCAGTGAAGTCGACATGCAGCGCCTAAACCAATCCCGA
TCCCTCAGTGTGGTCACCTCGCAGACAGCCGCTCCGCCGAAGTTCGCACG
CAAGCGTGTGGCCTGGACCGCAAGCTTTCTAGACCAT
BO32718.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:42:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17230-RC | 1506 | CG17230-PC | 1..1503 | 17..1519 | 7515 | 100 | Plus |
| CG17230-RB | 1506 | CG17230-PB | 1..1503 | 17..1519 | 7515 | 100 | Plus |
| CG17230-RA | 1506 | CG17230-PA | 1..1503 | 17..1519 | 7515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:42:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17230-RC | 3470 | CG17230-RC | 160..1662 | 17..1519 | 7515 | 100 | Plus |
| CG17230-RB | 1736 | CG17230-RB | 160..1662 | 17..1519 | 7515 | 100 | Plus |
| CG17230-RA | 1927 | CG17230-RA | 351..1853 | 17..1519 | 7515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:42:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11464062..11465564 | 17..1519 | 7515 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:42:46 has no hits.
BO32718.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-12 11:18:01 Download gff for
BO32718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17230-RB | 160..1662 | 17..1521 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:32 Download gff for
BO32718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17230-RA | 351..1853 | 17..1521 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:49:50 Download gff for
BO32718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17230-RA | 351..1853 | 17..1521 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:49:50 Download gff for
BO32718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11464062..11465564 | 17..1521 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:32 Download gff for
BO32718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7289784..7291286 | 17..1521 | 99 | | Plus |
BO32718.pep Sequence
Translation from 16 to 1537
> BO32718.pep
MSGRLNHQHAAYAHRMEQEHNRVQATQAVNSYYSHWGKVTSRFENWTNKE
YYEKADQQLQSRRDQQEKEAALNERRSRLRQLLASESEEYNNEMERRRRP
REPGGGDLQMLDRVNQSLKEQEQLRRKLEMEAKLYGRWRHGVDDEKLLYQ
SKSDNEVLAKLNWLDRQIESQQQREEQQALAAERQLLLQQEISRTEQAQK
ERQQIREQQLRELRALQESHMSELRLRQQEADKLKEEEQHFQLFLGELDK
ERELLEESSALVLKQVDSGHAFNLKKIKVFIRQRSEASRKQISLCINMLH
RMAKYVVKTEELKTLLDKYRSQLENEELACAQIESMYESEAKYNLQRSEE
NWREQHLQRYGELSKFIDQEKDCLGAMLQENVSQQQTLVELRSQHLTGIE
QANKQLEQLSQVQADEVPAPSQSNLKEVESQSSVSETSVEENLLPKVSDS
FSNLNLDVWKDLPPARSEVDMQRLNQSRSLSVVTSQTAAPPKFARKRVAW
TASFLDH
BO32718.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:08:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17230-PC | 501 | CG17230-PC | 1..501 | 1..501 | 2530 | 100 | Plus |
| CG17230-PB | 501 | CG17230-PB | 1..501 | 1..501 | 2530 | 100 | Plus |
| CG17230-PA | 501 | CG17230-PA | 1..501 | 1..501 | 2530 | 100 | Plus |
| rgn-PD | 800 | CG6014-PD | 322..702 | 65..436 | 188 | 23.6 | Plus |
| rgn-PA | 800 | CG6014-PA | 322..702 | 65..436 | 188 | 23.6 | Plus |
| rgn-PD | 800 | CG6014-PD | 411..753 | 40..399 | 157 | 23.1 | Plus |
