BO32734.complete Sequence
5164 bp assembled on 2012-09-07
GenBank Submission: KX793882
> BO32734.complete
GAAGTTATCAGTCGACATGGTCACAATTTGTTCCTTGTCAGCTGCACTAA
GTTGTAACATTGCTTATAGATTTCCTATCTATGAAATGGAGCATTTAGAT
CTTGCCGGCTATCTTGGCCACACGCCTCAAAGTTGGAATACCCTGGGAAC
CTTTCAGGATCAAGATGCTGTTTACCTATCTAGCTCGCGACAAATGTTGG
AACCAATTTTGGAGGAGACTAGCGAGGATGAGGAACGTGCCCGAAGTAGC
TTGATTGTAAGCCTAGATCGCCGCTCCACCCTCTGGAGCTCTACGGAGTC
TGAAACTGGATCAGTCTTACGCATAGAAACGATTAAGGATATCGATGCTG
TTTCTGAGAGGGACTTTGTCTGCCCACCCAAGCGACCAAGGCGCAGCCAT
GACTTAAATTCTGGCCAGATTTCAGAGGATTGCGTGCAACTTCGCCGCCC
TATGCCTTACGATCCCGAGTACCACAATAGCTTTGAACGCTTTCTGGCTT
TGGAGGCATGTGCTCGCGATAGCTTCGGAAGCCAGGGCCAACGCAGCAGT
ATAGGCAGTAGGCGAGGGGGCACCTTCGAGGACTTTTATTCGGACAGGGA
CTCCTCCCACTCGCTATCGCGCAGCTCCTCCTTGGTACAGTTCGAGTCCT
TGGAACGCCAGCTCACGCTCCAGGAGCAGCATCAGAGTATGAACAGTCTG
GGCAACAGTTCGCCCTCGCTCACCTGCGAGTCTGGTGCTTCAACGCGGGC
CAGGACCAGGGACAGCAGTCCAGAGAGTAGGAAGGGATCAGCCCCGACGC
TGTCCCTGCTAAAGCGTTATGAATCCAGCGACTGTAGTCATCTGCACCAG
ACATACTATGAGCTGAACAATCTCAATTTTGAATATAAGCAGCAGCAGGA
ACTTCTCTCCAGAAGCCTGCGAGAGGCGGAGCTAAAATCTGACCTAGAGA
GCTCCTCTAGCTCCAGCTCGTCCAGCGATAGCAGTGGTCACAGCCTTCTA
AGCTCTTGCCTTGTTCCCGGAGATGCAGTAGCAACCGAAAGGGGGAAACA
GGACGGGACGAATTCTCGTCGAATTCCCCCCAACTCAGCTGAGAACCTGT
CCGAGGACTCCGGCTACTGCGAGCCAAGAACCCTAAAGCGGGAAAAGTCC
AAATCCATACCAAAGAATTTCGAGAAACTTTGCGAAGAGGAGGAGGAGCT
GCTGTTACTGGAGGAGGGCGCTCCGCATTCTCGCGACTTCAAAGACGAGC
ATGATTTGTGTCAGACCGAAATAGAGCAGACTGCGGATACGGCTGCATTA
GCATGCTCTCCGTCGTCTATAAATAGTTCCCCGGAGAGGGCCAGCTCCGA
ATCGGAATCGGCATCGCCGCTGCCATCGCCGACCGGATCGGCATCAACGT
CGTCTGCCGCCTCGTTCACTTGGCTACACAACAGTTTGCCAGATATCCGC
GAGCCACGAGGTCCACTCTCTGTGGAAATTAACAATTCAAAGCCCAAGAC
AAACGGCAGCGTTCTGGCCACCACCAGACAAAATAGTGGCAGCACCCGGA
GCAGCAGCTCCGCCGATAGCTGTGACGGTATATCGCTCCTCGGCCCCACC
CATTCACTCAACGAGCTCCAGGTGCTTGAACGGAGGCGACGACCACGTCA
TATTCGCCCCAGCCAGAGAAACTGTCACAGCAACAGTTCCAGTGAGGAAC
TGGAGGAGCTGGACAACTTATTTGTTGCCTGCCACACCCCGCCAAGGATC
CGACGCAGTTGCAGCTGGAACGAACGAGCTAGAAAAGTAGTGGGTGTGGC
AAGTGCCGGATATTTGAACGCTAGTTACCAAAACCTAACTCTATTGAACT
ACACGGATAACTGGCTGCCGGCAGAGATTCTTCAGAAGAACCACAAGAGG
AGCCCAGCAGAAGAAATGTCGAAACAAAGCAGTAATACCTGCGGAAATTA
CGAGCACATGATATGTAAGGGAAACTTTTTGCTGGATGAGATCAGCAAGG
TTTATGACAAAAATGTGTCTATACTGACGGATAAGCCGGTGCTGGATACC
AAGCTCCCTGCGCCAGTGGAATGTGATTTAAATGAACCTATTGAATGTTC
GAAGGTGCAGCACGTGCAGCTAAACATAAAGCCACCGCCGCGCCAGAAAC
GTTTGACTCAACAGCCGCCAGCCGCCATGACCTTTAATGGCCTTGTTAAA
ACATTTGACCAGGATCCCACTAACTTGCGAACCTCGTACACCCAAAGCCT
AGAGCAGTGCCACCTTGACGAGCAAGAAACGGCAAAGCCTGCTTCGTACC
CGCCGTCAGCCATCTCACAACGGTTCCTGCCCAAGCGGCGATTCCAGTCC
CAGACGTCGGCGGCTAAGCAGCGAAGTCTGGTAAGCAGCACGCCAAATCT
CGCGGCCAGCGACGACGGGCAGCCGGAATCCGAGTACGATATCTACGTGA
GCAGTGCACACGCCTCAATGCACCAGTTGCCGCAGACAACAACGCTCCCG
AAGCCGCTGGGGATTCTGCTTCCAGCCGGATCGCGCCATTCTTTTGGCAA
GGAGGTAAGCTTCTGCCCAGTGGTAAGCAAGTACTGTTGGCAGGAGCAGT
CCTCCGAGGAGCCCACCGAGGACCAGTTCCACTCCAGCGAGGGCGAGCAG
GGGCCGCCCAGCGATGACGAACTGATGGACCCCACATTGGTGCACAACAC
CAGAGAGAACGAAAACATCGCTGCGCTCTTCGAGCCCGAGCCAGAGCAGG
CGCATCGTCTAAGAGAGCCGGCGATCGCACAAAAGTTTACCGGTTTCCAT
ACCAATGCGCTCTTGTCCGCCTCCACACACGCAGAGAAAAACTTATCATG
TGAAGAGAGCGCCAATGTCAAAAACAAAGCAAACTTAGCCACACCCGATT
GCCGCGATCAAAGAACCGAAGCTAAGACCACCCTGGAACCTGAGCCCGCT
TTAAGCAGCACAGTCAGTCTAAAACCTTGTGCCGTTGCGAACTCGTCTTG
TCGAGAAGAAACTCCGAGCGATGCTATTAATGAACCTGCATCTGCGACTG
CACGACCACTTAGCTTGCCGATTCTTAGCGAGCCGCCTACCAACCGCGCG
CACCGCATCCTATACTCATCCCAACAACTAAGGCGATACGAACCGAAGGC
GTCACCGATTAACAAGATGCCGCCGGCCAACGAACTTAGCCCGCAAGCCG
CGGCTGTTGCGAGAACGGACGAGAAACATCCAACCTCCAGAAGCCTCTTC
TCCAGGTTCACCCACGGGCTGAGATTTTCGTTGCGTCGCAAAAAGAAGCA
GCAGCAACAAGAGCCTTCGCAGGTCAAAGAGTCGCCAAAGGAGTTAAGGC
AGAGCCCCGAGGAGAGCCAACCGGTCGACTTTGTGCACATCCCTTTAAAG
CCGCCAAGAAGTTCGCAATGTGGCCGACTGGACGATACTATCGTGTCAGA
GACAAGCAGTGGCCACGTGCACAGCTGGCAGCAACAGGAACAGCTGGGCA
AGACCTCAACTCTGCAAAAGGTGACTGGCAAGCCGCCACTGCCCAAGATG
CCACCACGCAGTGGCATCCTAACGCATGCGCCTCAGGAAACGACCGGTGA
AACTGTCAATTGCCATCGCACCGAGGCGTTGCCGAGCGTCGAACGAGAAC
ACTGCAATCAGTTAACCGGACAGTTGGTGGCTAAGGTTCAAGCACAGAGA
ATGCGGGACACCGGGCTCAGCTCGCAGATAGTAGTCGCCGAAGAGACACA
TACGGTTAATCGACTGGCCGGACACGGCGACGCGACTAGGCCCACTGTGG
TTACCGCCGTTCCGGTTTCCGTTGCTCCTGTCGCAGAGGTCGACAAGATG
GGTTTGATCGAGACCAATCTGGACACTCATGAAACGGTTATATCGGGAAA
GACACGGTCTCTTATGGATATAACTTGCAACCCACTTAGCATGCCACACA
AGCGATACATCGTAAAGCGTCTAAATGTAAACAGCGTTGCGTATGACGTA
GATGAATTGGACGCAGAAGTTAAACCCTCGCCTGGTGGAATGGCATCCGT
ACGCAGGCCTCACAAGAGTATGGAATTTCTGCTGGACAAGGAGAACCAGA
AAAATATTCTGCCCCCTGAAAACGAACTGCAGAAATCACATGACCACAAT
CCAGGCGCACTAAGCGAGCATCAACTGCGTGTCCAAGCTTCGCTTCAGCG
GCTAAATATTCCCGACTGGTTCCGTCATTACAACAAAGGCCCCGAAAAGG
CAGCAGATGGCGAAAACGCATGCACAAGTGCGACTGGCGGTGGTTACCGA
CCTGGCAACTTCACCCGCAAACGCGCACAGGAATCGGGTCGCTGGCAAGG
GCTCAACTCAAAGACGACTTCCCTCAGCTCGCTGGGATCTCAACGCTCCG
ACCGAAGTCCTTTGTTGATGAGTCCCTCAGCGCACAGTCATCACGGCGGC
CAAAGCTCCTATTCATGTGGGTCGACGACAATTCACGGTCCGGCACCTGT
ACAGATAGGCATGGGTGCAACTCGCTGGTCAACCTCTCATCTGAATTCCA
CTCAGATGTCTCCCGGTGCCTCGCAGCGCGGAAGCTTTACGCGCGGCGCC
CCCATTAATAGCAGCTTTATATCTGTGGCCAGTGGTAGTGGCTTGTTGCG
CAATTCCTACCGACAGCCGTATTTGGGTTGGCGCAGCACAGAGAAGCTCT
CCCAACGAACTCCCCACGAACGTCTGGCCAATTCGCTGCTAACCCAACGG
ACAGCTCCGCCCTCCACACGGGCGGGCAATGAAACCCGCACCTTACATTC
TGTATCGACAGAGATTCAAAGCTCCATTAAGGAAGTCACATCCGCCATCG
TTCACTTCGTGAACGACCAGCAGCAGTCCCAACATCCGCGGAGCCGTTCT
ACCAGTCCAAATTCAAGGTGCTGGCTGGAAAGCAGCTTTGTTGGTACACG
AACCCTGGACTCGCCGCAAACACCCGTCATTGACAACAGTCCTCCCGAAT
TGGCACGAAAGCAGCAGCAGCTCCACCCGCACCAAGTGCATCTGGATGTC
GGTCTGTCGCCTGTAGTCTCCGCTGGTCAGCTGCCACATCGCATGAACGG
AATAAATCGTATCGGCAACGGTGGCGGTGAGTCCGCCATCCAAGTTGCAA
GCTTTCTAGACCAT
BO32734.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:00:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42748-RC | 5133 | CG42748-PC | 1..5130 | 17..5146 | 25620 | 100 | Plus |
| CG42748-RB | 5133 | CG42748-PB | 1..5130 | 17..5146 | 25620 | 100 | Plus |
| CG42748-RG | 6420 | CG42748-PG | 1..5110 | 17..5126 | 25520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:00:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42748-RC | 6348 | CG42748-RC | 349..5478 | 17..5146 | 25620 | 100 | Plus |
| CG42748-RB | 6880 | CG42748-RB | 881..6010 | 17..5146 | 25620 | 100 | Plus |
| CG42748-RG | 10534 | CG42748-RG | 881..5990 | 17..5126 | 25520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:00:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22141833..22144280 | 338..2785 | 12240 | 100 | Plus |
| 2L | 23513712 | 2L | 22145669..22146996 | 2784..4111 | 6610 | 99.8 | Plus |
| 2L | 23513712 | 2L | 22154797..22155408 | 4111..4722 | 3060 | 100 | Plus |
| 2L | 23513712 | 2L | 22158511..22158741 | 4916..5146 | 1155 | 100 | Plus |
| 2L | 23513712 | 2L | 22156620..22156817 | 4722..4919 | 990 | 100 | Plus |
| 2L | 23513712 | 2L | 22141593..22141768 | 163..338 | 880 | 100 | Plus |
| 2L | 23513712 | 2L | 22140824..22140971 | 17..164 | 740 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:00:02 has no hits.
BO32734.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-07 16:13:34 Download gff for
BO32734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42748-RC | 347..5476 | 17..5148 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:52 Download gff for
BO32734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42748-RB | 881..6010 | 17..5148 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:18:59 Download gff for
BO32734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42748-RB | 881..6010 | 17..5148 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:18:59 Download gff for
BO32734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22140824..22140971 | 17..164 | 100 | -> | Plus |
| 2L | 22141595..22141768 | 165..338 | 100 | -> | Plus |
| 2L | 22141834..22144280 | 339..2785 | 100 | -> | Plus |
| 2L | 22145671..22146996 | 2786..4111 | 99 | -> | Plus |
| 2L | 22154798..22155408 | 4112..4722 | 100 | -> | Plus |
| 2L | 22156621..22156815 | 4723..4917 | 100 | -> | Plus |
| 2L | 22158513..22158741 | 4918..5148 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:52 Download gff for
BO32734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22140824..22140971 | 17..164 | 100 | -> | Plus |
| arm_2L | 22141595..22141768 | 165..338 | 100 | -> | Plus |
| arm_2L | 22141834..22144280 | 339..2785 | 100 | -> | Plus |
| arm_2L | 22145671..22146996 | 2786..4111 | 99 | -> | Plus |
| arm_2L | 22154798..22155408 | 4112..4722 | 100 | -> | Plus |
| arm_2L | 22156621..22156815 | 4723..4917 | 100 | -> | Plus |
| arm_2L | 22158513..22158741 | 4918..5148 | 99 | | Plus |
BO32734.pep Sequence
Translation from 16 to 5164
> BO32734.pep
MVTICSLSAALSCNIAYRFPIYEMEHLDLAGYLGHTPQSWNTLGTFQDQD
AVYLSSSRQMLEPILEETSEDEERARSSLIVSLDRRSTLWSSTESETGSV
LRIETIKDIDAVSERDFVCPPKRPRRSHDLNSGQISEDCVQLRRPMPYDP
EYHNSFERFLALEACARDSFGSQGQRSSIGSRRGGTFEDFYSDRDSSHSL
SRSSSLVQFESLERQLTLQEQHQSMNSLGNSSPSLTCESGASTRARTRDS
SPESRKGSAPTLSLLKRYESSDCSHLHQTYYELNNLNFEYKQQQELLSRS
LREAELKSDLESSSSSSSSSDSSGHSLLSSCLVPGDAVATERGKQDGTNS
RRIPPNSAENLSEDSGYCEPRTLKREKSKSIPKNFEKLCEEEEELLLLEE
GAPHSRDFKDEHDLCQTEIEQTADTAALACSPSSINSSPERASSESESAS
PLPSPTGSASTSSAASFTWLHNSLPDIREPRGPLSVEINNSKPKTNGSVL
ATTRQNSGSTRSSSSADSCDGISLLGPTHSLNELQVLERRRRPRHIRPSQ
RNCHSNSSSEELEELDNLFVACHTPPRIRRSCSWNERARKVVGVASAGYL
NASYQNLTLLNYTDNWLPAEILQKNHKRSPAEEMSKQSSNTCGNYEHMIC
KGNFLLDEISKVYDKNVSILTDKPVLDTKLPAPVECDLNEPIECSKVQHV
QLNIKPPPRQKRLTQQPPAAMTFNGLVKTFDQDPTNLRTSYTQSLEQCHL
DEQETAKPASYPPSAISQRFLPKRRFQSQTSAAKQRSLVSSTPNLAASDD
GQPESEYDIYVSSAHASMHQLPQTTTLPKPLGILLPAGSRHSFGKEVSFC
PVVSKYCWQEQSSEEPTEDQFHSSEGEQGPPSDDELMDPTLVHNTRENEN
IAALFEPEPEQAHRLREPAIAQKFTGFHTNALLSASTHAEKNLSCEESAN
VKNKANLATPDCRDQRTEAKTTLEPEPALSSTVSLKPCAVANSSCREETP
SDAINEPASATARPLSLPILSEPPTNRAHRILYSSQQLRRYEPKASPINK
MPPANELSPQAAAVARTDEKHPTSRSLFSRFTHGLRFSLRRKKKQQQQEP
SQVKESPKELRQSPEESQPVDFVHIPLKPPRSSQCGRLDDTIVSETSSGH
VHSWQQQEQLGKTSTLQKVTGKPPLPKMPPRSGILTHAPQETTGETVNCH
RTEALPSVEREHCNQLTGQLVAKVQAQRMRDTGLSSQIVVAEETHTVNRL
AGHGDATRPTVVTAVPVSVAPVAEVDKMGLIETNLDTHETVISGKTRSLM
DITCNPLSMPHKRYIVKRLNVNSVAYDVDELDAEVKPSPGGMASVRRPHK
SMEFLLDKENQKNILPPENELQKSHDHNPGALSEHQLRVQASLQRLNIPD
WFRHYNKGPEKAADGENACTSATGGGYRPGNFTRKRAQESGRWQGLNSKT
TSLSSLGSQRSDRSPLLMSPSAHSHHGGQSSYSCGSTTIHGPAPVQIGMG
ATRWSTSHLNSTQMSPGASQRGSFTRGAPINSSFISVASGSGLLRNSYRQ
PYLGWRSTEKLSQRTPHERLANSLLTQRTAPPSTRAGNETRTLHSVSTEI
QSSIKEVTSAIVHFVNDQQQSQHPRSRSTSPNSRCWLESSFVGTRTLDSP
QTPVIDNSPPELARKQQQLHPHQVHLDVGLSPVVSAGQLPHRMNGINRIG
NGGGESAIQVASFLDH
BO32734.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:28:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42748-PC | 1710 | CG6448-PB | 1..1710 | 1..1710 | 8884 | 100 | Plus |
| CG42748-PB | 1710 | CG6448-PA | 1..1710 | 1..1710 | 8884 | 100 | Plus |
| CG42748-PJ | 1717 | CG42748-PJ | 1..1717 | 1..1710 | 8866 | 99.6 | Plus |
| CG42748-PG | 2139 | CG42748-PG | 1..1707 | 1..1707 | 8853 | 99.8 | Plus |
| CG42748-PK | 2190 | CG42748-PK | 1..1704 | 1..1703 | 8840 | 99.9 | Plus |
