BO32736.complete Sequence
1459 bp assembled on 2012-07-12
GenBank Submission: KX794838
> BO32736.complete
GAAGTTATCAGTCGACATGTTCAAGTTCGTGCTGAACGACGCCGCCAGCT
ACGTGCGATCCAATGTGCGGGAGTTCAGTTTGAATGCACTGCGTCTGCTG
CCGCAACTGCCTCAATTGAGTCCATACGATGTTAACCTTGTTCTGAGGGA
GAACGAGTTCGTTTACAACTTTCCCGTGGATGGAGTCATCCGCAGCTATG
AAACAAATCAGCTGGGATCAAACTGGCCCTGCGAGGATTCCCGCACGGAG
GCCAGCTTCCTGCACCGCAACGGCTTCATTTGTGGCATTTTCGACGGGCA
TGCGGGAGCAGCATGTGGCCAAGTGGTGTCCAAGCGACTGCTTCGCTATG
TTTCGGCGGCCACGCTGCCGCGCCAGGTGCTCCGGGAGCAGATGAAGCAG
GGTGCCGACAGCCAGTCGTTCCTCAAGTGCCACAATGACAACGTGGACTT
TGTTAGCATGATCAAGCCCATGTACGAGGCTAGTTTCCTCAAGTATGTCA
ATCAATTGTTAGAGACACCGCAACGGGATGTATCCAGTGAACTGGTGAAC
GCCTTCCTCCAGCTGGATGAAGAGATCTCGCAGGAGGCTCTGACCAGCAA
CGATGTACGCACCATGAACGTGGCCCTTTCTGGAGCCGTTGCCTGTTTGG
TTCACATTGAGGGACTGCAGATGCACGTGGCCAGCACGGGTGATTGTGGC
GCAGTGTTGGGCGTTCTTGATCCCCAGACGCAGCAGTGGCACTCAAAGAA
GCTTAACATCGAACACAATGCTGACAATATGTCCGAGGTGCGTCGCATTC
TGGCCGAGCATCCCAAGGAGGAGCATGAGACGGTGATCCGAAACGGCAGG
CTGCTTAGCCAGCTGGCGCCGTTGCGTGCCTTTGGGGACTTTCGCTACAA
GTGGTCCCAGGAAATAATGCAGCAGAAGGTGCTGCCGATGTTCGGCGTGC
AGGCAATGGCGCCGAATTACTATACGCCACCGTACCTAACCGCCCGCCCC
GATGTCCAGCAGCACGAATTGGGGCCCAACGACAAGTTTCTAGTCATCGC
CAGCGACGGCCTATGGGATTTCCTTCCGCCCAGCGAGGTGGTCAGCTTGG
TGGGGGAGCACATCAACTCCAAAAAGATCCTCGAACCGATGCGCCTGCCG
GAAGGCGATACAACGCTGCAGGAAATCTCTCAGCAGCTGGCCGAAAGAAA
GGCTGGCCTCACTCGCAAACCCGTAGACCAAAACGCGGCCACGCATCTCA
TCCGGCATGCTTTGGGCGGCACCGACTATGGGATTGAGCACTCGAAGATC
TCGTACTATTTGACGCTGCCCAGGGACGCGGTGCGTCTGTATCGCGACGA
CATCACAATCACTGTCATCTACTTTAACTCGGAGCACATTGCCAAGCTGC
ACAGCGATGTGGATCAAACGGAGGTCACTGCGCCGGTAGCAGCAAGCTTT
CTAGACCAT
BO32736.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:42:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pdp-RB | 1428 | CG12151-PB | 1..1425 | 17..1441 | 7125 | 100 | Plus |
| Pdp-RA | 1428 | CG12151-PA | 1..1425 | 17..1441 | 7125 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:42:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pdp-RB | 2170 | CG12151-RB | 520..1944 | 17..1441 | 7125 | 100 | Plus |
| Pdp-RA | 1957 | CG12151-RA | 307..1731 | 17..1441 | 7125 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:42:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7732313..7732882 | 1201..632 | 2850 | 100 | Minus |
| X | 23542271 | X | 7732987..7733489 | 633..131 | 2515 | 100 | Minus |
| X | 23542271 | X | 7732005..7732245 | 1441..1201 | 1205 | 100 | Minus |
| X | 23542271 | X | 7734017..7734132 | 132..17 | 580 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:42:51 has no hits.
BO32736.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-12 11:18:02 Download gff for
BO32736.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pdp-RA | 276..1695 | 22..1443 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:34 Download gff for
BO32736.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pdp-RA | 312..1731 | 22..1443 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:49:52 Download gff for
BO32736.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pdp-RA | 312..1731 | 22..1443 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:49:52 Download gff for
BO32736.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7732002..7732245 | 1201..1443 | 99 | <- | Minus |
| X | 7732314..7732881 | 633..1200 | 100 | <- | Minus |
| X | 7732988..7733489 | 131..632 | 100 | <- | Minus |
| X | 7734019..7734127 | 22..130 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:34 Download gff for
BO32736.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7626035..7626278 | 1201..1443 | 99 | <- | Minus |
| arm_X | 7626347..7626914 | 633..1200 | 100 | <- | Minus |
| arm_X | 7627021..7627522 | 131..632 | 100 | <- | Minus |
| arm_X | 7628052..7628160 | 22..130 | 100 | | Minus |
BO32736.pep Sequence
Translation from 16 to 1459
> BO32736.pep
MFKFVLNDAASYVRSNVREFSLNALRLLPQLPQLSPYDVNLVLRENEFVY
NFPVDGVIRSYETNQLGSNWPCEDSRTEASFLHRNGFICGIFDGHAGAAC
GQVVSKRLLRYVSAATLPRQVLREQMKQGADSQSFLKCHNDNVDFVSMIK
PMYEASFLKYVNQLLETPQRDVSSELVNAFLQLDEEISQEALTSNDVRTM
NVALSGAVACLVHIEGLQMHVASTGDCGAVLGVLDPQTQQWHSKKLNIEH
NADNMSEVRRILAEHPKEEHETVIRNGRLLSQLAPLRAFGDFRYKWSQEI
MQQKVLPMFGVQAMAPNYYTPPYLTARPDVQQHELGPNDKFLVIASDGLW
DFLPPSEVVSLVGEHINSKKILEPMRLPEGDTTLQEISQQLAERKAGLTR
KPVDQNAATHLIRHALGGTDYGIEHSKISYYLTLPRDAVRLYRDDITITV
IYFNSEHIAKLHSDVDQTEVTAPVAASFLDH
BO32736.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:08:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pdp-PB | 475 | CG12151-PB | 1..475 | 1..475 | 2464 | 100 | Plus |
| Pdp-PA | 475 | CG12151-PA | 1..475 | 1..475 | 2464 | 100 | Plus |
