Clone BO32739 Report

Search the DGRC for BO32739

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:327
Well:39
Vector:pDNR-Dual
Associated Gene/TranscriptSin1-RA
Protein status:BO32739.pep: Imported from assembly
Sequenced Size:1741

Clone Sequence Records

BO32739.complete Sequence

1741 bp assembled on 2012-07-27

GenBank Submission: KX794427

> BO32739.complete
GAAGTTATCAGTCGACATGGCGACCTACTCCAACCAGCATTGGCTGCTCT
CCCACATCCGCAACTCCTTCATATCCACGGACGACACCGGAATGTGCGAG
ACGGTGATGCTGAGCGATGACATGCCCAAACACTATTTGCGAAAATTCGG
TAACTCGGGCGCTGGAGGAGATCACTATCATTGGCGACGGGCGCACAAGA
CACCGCCGACGGGGGGCGGGACAACACCGGAGCGGAACACCCGGCATCCG
GATGCGCCACTCCAGGAAGTGGACTTCATCTGCTATCCGGGACTGGACCT
CAGCGACGACGAGGAGGACATGTCCACGCACTCCTTTGACATCCAAATGT
ATCCGGAGGTGGGCGCCCACCGCTTTCGCTCCAACACTGCCCAAAAACTA
GAGAAACTGGATATTGCCAAGCGAAGGGCGGCGCGCATCAAGAGTGTTAA
CTACCAGGAGGAAGTGCAGCCACCGGAGAGCGATGATTTCTTTAAACGCA
AAGAGTTGCCCCTCAGCAAAGCTGAGCGAGTTAAAAATGAACCGAAAGCC
AACGACGATGATCTGTCAGATGAGGGTGTTCAGAGCCAGCTCACTGAACA
GTTGGCCAAAAGTCCAAAGCAAGCACAGAATCGCTTCATTGAATTCGCCC
GCTTCGATGGCACCTCCCAAGTGGGTATGCAAACGAAACGGATAAACGTG
TTTTTAAATATGCTTCCCGAGCCGGATCGCAACTACCCGTTGAAGATCTG
CGTCGTAGCCACTGCCAAAATCCAGGAGGTAATTGGTTTTGTCTGCTACA
GGACCTCCTTACAATATCCCGACGTTCCTTTGAAGTCCCTGCAGCATTAC
GCTTTGTATATGACAGAGGATAATGATGATATGGAAGACTTCCCACCGTT
GGACAATCGCGAACCCTGCTCTAAGTTTGGCTTCTCCCAACTGACCCTCG
CAGAGCGTCGGCCATTGGCTCCAGTGACGCGAGTTGATTACCACAGCCAG
CTGGGCAGTAAATCCATGACTTCCGTGGAAGACAAGACAGCTCTGTCCGA
TGCGGCTGTCAAGGCTCTGCAAAATATTAGCCTAAATGGAGGAACTAGTG
ATCCGGGTGGAGGAGGTGGAGGAGGCGATAGTCCACACGATAATGTCAAG
GAGTATGAGAAGCGATTGTTGAATCACAACGATATGCTGGAAGCACCCAT
GCATCGTACTTTCCGCCTCAACATCATCGACAAGAGGTTCTTCAAATCCG
ATGTGACTCTGGGAATATCTGGTGAGAGAATAGAGATCGATCAGTGCAAG
AATGCCAAGTTCTGGCCGCAGAAGAAGCCCGTATCCACTCCCATTGACTT
TGTTGCTCACTGCGAGATTTTGGAGCGACGCCACCTGAAGGCTCTGTTGC
GCATCTGGCTGAAGTCAAACTCCTCGTCCCCTTCCTTCTCCACGGGCTGC
ACTTCGGCGCCGATCAACGCCAGCGTAACCACACTGAATGCGGGAAGCGG
CAGTGGTGGGATTGCCCACTCGCCCAGCAGTCCGGGTCACTCTTCCGGAC
TCTTTTCAAGCAGCAATATTCGCTTTAAGCACTACGACTTCGATACGGAC
ACCCACACGGCGGAGCAGATCCACAACAAGCTGAACTGCATACTAGAGAT
GCGATCCAGCGATCTGAGGCGCGAGTTCCTTTTGCAGCGCGATCGGAAGC
AGGAGAAGAGGCAGCTGAAGTTGGCAAGCTTTCTAGACCAT

BO32739.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:50:09
Subject Length Description Subject Range Query Range Score Percent Strand
Sin1-RA 1710 CG10105-PA 1..1707 17..1723 8535 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:50:10
Subject Length Description Subject Range Query Range Score Percent Strand
Sin1-RA 2027 CG10105-RA 82..1789 16..1723 8540 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:50:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14411906..14413613 16..1723 8540 100 Plus
Blast to na_te.dros performed on 2014-11-28 11:50:08 has no hits.

BO32739.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-27 17:06:01 Download gff for BO32739.complete
Subject Subject Range Query Range Percent Splice Strand
Sin1-RA 97..1803 17..1725 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:23 Download gff for BO32739.complete
Subject Subject Range Query Range Percent Splice Strand
Sin1-RA 83..1789 17..1725 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:52:10 Download gff for BO32739.complete
Subject Subject Range Query Range Percent Splice Strand
Sin1-RA 83..1789 17..1725 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:52:10 Download gff for BO32739.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14411907..14413613 17..1725 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:23 Download gff for BO32739.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10299412..10301118 17..1725 99   Plus

BO32739.pep Sequence

Translation from 16 to 1741

> BO32739.pep
MATYSNQHWLLSHIRNSFISTDDTGMCETVMLSDDMPKHYLRKFGNSGAG
GDHYHWRRAHKTPPTGGGTTPERNTRHPDAPLQEVDFICYPGLDLSDDEE
DMSTHSFDIQMYPEVGAHRFRSNTAQKLEKLDIAKRRAARIKSVNYQEEV
QPPESDDFFKRKELPLSKAERVKNEPKANDDDLSDEGVQSQLTEQLAKSP
KQAQNRFIEFARFDGTSQVGMQTKRINVFLNMLPEPDRNYPLKICVVATA
KIQEVIGFVCYRTSLQYPDVPLKSLQHYALYMTEDNDDMEDFPPLDNREP
CSKFGFSQLTLAERRPLAPVTRVDYHSQLGSKSMTSVEDKTALSDAAVKA
LQNISLNGGTSDPGGGGGGGDSPHDNVKEYEKRLLNHNDMLEAPMHRTFR
LNIIDKRFFKSDVTLGISGERIEIDQCKNAKFWPQKKPVSTPIDFVAHCE
ILERRHLKALLRIWLKSNSSSPSFSTGCTSAPINASVTTLNAGSGSGGIA
HSPSSPGHSSGLFSSSNIRFKHYDFDTDTHTAEQIHNKLNCILEMRSSDL
RREFLLQRDRKQEKRQLKLASFLDH

BO32739.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:12:45
Subject Length Description Subject Range Query Range Score Percent Strand
Sin1-PA 569 CG10105-PA 1..569 1..569 3011 100 Plus