BO32747.complete Sequence
4324 bp assembled on 2012-09-07
GenBank Submission: KX795263
> BO32747.complete
GAAGTTATCAGTCGACATGGTGCCGAACGAGAAAAGCTTTCCCCGAGGCG
GGACAATCCACAGCGAAGTCAAAACCGACGACGTGAGCCTGAATATCGTT
TTCGGTGCCTCGCAGAAGAAGGTGAAGAAGGCGCCGAAAGTAAAAGAGAA
CCTTCTGAGCTACGAAACCGAGGAACAAAATGGCCAACTGGAGGCCTTCT
CCGCGGAAACGCTCAATATGGACACGCTGCAGGAGGACATGCTGGTCATG
GGAGTGGTCAAGGAGTTGACAGCCACCGCACTGCAGATCGCTTTGCCCGG
TCGGATGTTCGCCCGCACCTTGGTGGCGGATATATCCGACGCCTACACCC
GTGTGGCCAAGGCGGCCATGTCCGGAGACACCAGCGAGTACCACGACCTT
ACCGAGCTCTTCCAGTTGGGCCGCATCGTCTACGGCAAGGCCATCAAAAC
AGAAAAGCTGGACACCGGTCGGGTTAGCCTGCTCCTTTCCCTCAAGCCGG
CCGATGTGCACGGTAATCTGCATCACAAGAGCATTAAGAAGGGTTTCATC
TTCTCTGGCGCCGTGGCGGAGGCTCTGGAGCACGGCTATGTCATCGAGTC
GGGAGTACAAGGACTTCAGGCATTCGTGCCATGCGAGAAGCCAGCTCAGA
AGCTACACGTGGGGCAGTTGGCTTTCCTAAAAGTCAAAACCGTTCATCAC
GACACCCACCAGAGCACCTGCACCTGTGTCCAGGTGGAGCAGGACCAGCT
GCGCATCAAGAGTCAAAACGAGACGAATCTCGACTACATTCTGCCAGGCA
GCATTGTAAAGTTTAAGGTGGCCAAGCATCTGAAGGATGGCCTCAAAGGC
AGCATCATGAATGAATCCTTTAGTGCCTACGTCAACGAACATCATCTAGC
TAACGCTTTGGATACTTTGGATGCCTACGAGCTGAATGAGGATTACAATG
CCAGGGTACTCTACGTGATGCCCCTAACCAAACTAGTGTACTTAACTCTT
AATCTGGATATCAAAACTGGAGCTGCAGTAGCAAAAGATCAGGATGAGGA
AGAGCAGGAGGTAGAGCCCATAAAGGTGGGTTCCGTGGTGGAAAAAGCCA
AGGTTCTGCGCTTGGGCAGCGGTGGCGTGGTACTGCTTCTTAATAAGAAA
CTAAAGGGCATTATCTCATACGGTTCAATCAGAGGCAATTTCAAGGGAAA
TTATGACAAGGACGAAGTATTGTCCAAATACGGAAGAAAAACGAAGCATA
AGGTTCGCATCCTAGGATACGATGTCATCGAATCCTTGTACTACTGCTCC
GATGATCCCAACGTGGTCAACGAAAAGCTGTTCTGCCTGGAGGATATTAA
TGCCGGCGATCTGGTCACAGCGAAAATATTCAAGAAGGATGACAAGATCA
AGGGCTGGTCGGTGAGGATCGGCAAGGTCAACGGAATACTGGAACAGTTC
TATCTGGCACCCAATGTCCGCTACGATGTGGGTCAGTCGTTGAAGTGCCG
CGTCCTAGAAGTTAATGCCGAGCGAAAAATCTGCTACGTGAGCAATCGTG
CCGAGTATTTGGGCAAGGGAATTAAAATTCTGACTGATTATGCGTCCGCT
CACGTTGGAAACGTCTATATGGGCACAGTAGTCCGATGTGAGGACACTTA
CGTCCTAGTGAAGTTCGGCAACGGCATCAAAGGAGTTTTGCACAGGCAGA
ATCTAAAGGAAAATAGCTCATTTTTCGAGGGACAAACAACTAAGTTCCGC
ATCCTAACACGCAACAAGGACCAAATCACTTTGACTTTGCCGGAGGACAA
GTTCCAGCTTGGTGAGATCTGTCCCGTTGAGATAACCAATGCCTTAGACG
CTGGACTGGAAGTTAAAATCACCTTCGCCGCCGAAGATGACGAAGAGGAT
GAAGATGGGAATCCAAAGCTGGAGGAGTTTGTGGGCCTAATTCCACTGCG
ATTGTTGTCGGATCACCTGGAGCTGCTGCACGCCCAAATGCGGGTCCATC
CCGCTGGCTCTTACACCGATGCGGCCTGCATTATGCAGAACATCTTCAGC
TTACGAGATGTCCCCTACTTCAGTGGCCAGCTCACCAAGGATTGGCAATC
GGTTCAAGTGGGAGACATAATACGCTCTTATGTGAAACACGCCACCGACC
AGGTGGTGGACCTCATGGTGTGTGTTCGCAACTACAATAAGCCGGTAAAG
GTTCACGTCAAGATGCTTCGTCTGAATGCCGTGAAAAATGCGCCCGTCGA
GCTAGTTCCTGAGCAACTGCTATGGGTAAAGGTACTCAGCAAGGAGGTGG
AAACTAAGACTCTAACAGTTTCAGCAAAGCTTACGGATGTCTGGAGCGGG
GATCTTAGTGACACTGCAAAACTGGTCGAAGGCTATTTAAATGAAGTTGC
GCAAATAAAGGCAGGCCTTGAGGAAGCCTCCGCCCCTATTTCAAAATACT
CCGTTGGGGAGAAAATCAACGTGGTGTTCAAGGGCATTGATGCGACCACC
AATGACTGGGTCTACACAGTGGAAGGCAATGGCAAGGTGTCCGCCCTGCT
GCTCTCCAGTTTGGTTGGAACTGCCAAAGCTCCTGAGATGGGTAGCAAGC
ACGAGGCAGTTATTCTATGGATTGAATACTCCAGCGATGTGCTACTCATC
AGCAACAAGAAGCTGGACATTGCGCATATTTCACCAAGCGGCGAACTATC
CACGAATCTGATCGGAAAGGCTGGCATGAAGGCCAAGGTGCTGTTAAAAC
TGGAGTCCGTAGCAGTGTGCTCGCTTAAGAAGGGCACAAACCCGTTGGTC
ATCTGTCCAATTCGGTTGCACCCCAACGATATCGAAAATTCTGGAAGTGC
CGAGTTGCGCCAAGGAGATTTCTGCAATATAGCCTTCATCCATGACAAAC
TCCATATCGCAGTGCCAGAGACTGTTTGGCGCCTCTGGAGGGGAGTGAAG
AGAACGGCGGGCACAGAGGTCGCCCCTGTAAAAGCTAAGAAGGCAAAAGT
AGAGGAGTCACCTAAACAAAAGAAGACTACAATTGAGGAGACCTCTGCAC
AGAAGAAAGTCAAAGCGAAAGCTAAAGTGGAAACTAAAACGGAAGCGAAA
GCCATACCTACCAAGCGAAAGGCAGAAGTGGTAGAAAAAATTACCAATGG
CCAAAAGAAGACTCAACCCCTGACCAATGGAATTGTGAAAGAGAAACCTA
AGCAGAATGGCAAGCTCTTCTTTGAAGATAAAACTCCAGCCAAAAATGCC
AAGTCTGAGACACCCAAAAGCAATGGAGCAGAAGGCAAGTCGCGTTTGCC
CGGTGTGTCTAGTTTCTGGGAGGATGATGTGAACCAGTCCAAGGAAGGGT
CCAGCGACGAAGACGAGGAGCTGAATGTGGCGGAAACACAAAAAAATGCA
GCCAAAAAGAAACGGCTCAGCGCCAAGGAGAAGGCCAAGGCGGAGATCAA
GGAAGAGCAGCGACTGCGGGAGATCGAGGAGCGCAATGCGGATCCCAAGG
CACGTCTGGAGACAATCGACCAGTACGAGCGCCTTGTGATTGCCCAGCCA
AACAACAGTATATCCTGGCTGAAGTACATCGCTTTCCTTTTGTCCAACAC
AGAGATTGAAAAAGCTCGCGCCTTAGCTCGCAGGGCGATATCCACGATAT
CCTTCCGGGAAACACAGGAACTGAGGAACATGTGGAGCGCCTTGCTAAAC
ATGGAACTCGTCTACAGCAACAACTTCGATGATGTGCTCAAGGAAGCCCT
AAACTGCAATGATCCTTTGGAGATTTACATTAGCGTTGTAGACATCTTAA
AGAAGAACAAGAGAAAGGACCGCCTTTCCTCCGTGCTGACCACAGTACTC
AACAAGTTTAAAACGGAGCTCAGGGTGTGGCCCGTGGCCGCCGAGGCGTA
CTTCTGGCTGGGCAAGTCTGACCAAGTTCACAATCTGCTCCAGCGCGCAT
TGCGGGCCTTGCCAAATCAAGAGCACATCCCCTGCATTGTGTCCTTTGCC
AAGTTGTATGCAAAGCACGATAACAATGACATGGCGCAGACGCTGCTCGA
TGATGTAGTCACTTCCTATCCCAAACGAATCGACATCTGGTCGGTATATG
TGGACATGCTAATCAAGGCGGGTCTAATCGATTCCGCGAGAAACGTTTTG
GAGCGTGCCGTGGTGCAAAAACTGAAGCCGAACAAGATGCAAGTCATATA
CAAAAAGTATCTGCAGCTGGAGGAGAATCACGGCACGGATGCAACGGTGG
CCAAGGTCAAGCAGCAGGCCGAACAGTGGGTGAAGAACTACGCCAAGACG
GTCAAGGCAAGCTTTCTAGACCAT
BO32747.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:58:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5728-RA | 4293 | CG5728-PA | 1..4290 | 17..4306 | 21450 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:58:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5728-RA | 4622 | CG5728-RA | 96..4385 | 17..4306 | 21450 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:58:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24330800..24333084 | 2382..98 | 11425 | 100 | Minus |
| 3R | 32079331 | 3R | 24329146..24330738 | 3974..2382 | 7965 | 100 | Minus |
| 3R | 32079331 | 3R | 24328692..24328859 | 4306..4139 | 840 | 100 | Minus |
| 3R | 32079331 | 3R | 24328925..24329090 | 4140..3975 | 830 | 100 | Minus |
| 3R | 32079331 | 3R | 24333139..24333221 | 99..17 | 415 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:58:13 has no hits.
BO32747.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-07 11:02:23 Download gff for
BO32747.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5728-RA | 94..4383 | 17..4308 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:23 Download gff for
BO32747.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5728-RA | 96..4385 | 17..4308 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:18:13 Download gff for
BO32747.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5728-RA | 96..4385 | 17..4308 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:18:13 Download gff for
BO32747.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24330800..24333084 | 98..2382 | 100 | <- | Minus |
| 3R | 24328690..24328857 | 4141..4308 | 98 | <- | Minus |
| 3R | 24328925..24329090 | 3975..4140 | 100 | <- | Minus |
| 3R | 24329146..24330737 | 2383..3974 | 100 | <- | Minus |
| 3R | 24333141..24333221 | 17..97 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:23 Download gff for
BO32747.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20154412..20154579 | 4141..4308 | 98 | <- | Minus |
| arm_3R | 20154647..20154812 | 3975..4140 | 100 | <- | Minus |
| arm_3R | 20154868..20156459 | 2383..3974 | 100 | <- | Minus |
| arm_3R | 20156522..20158806 | 98..2382 | 100 | <- | Minus |
| arm_3R | 20158863..20158943 | 17..97 | 100 | | Minus |
BO32747.pep Sequence
Translation from 16 to 4324
> BO32747.pep
MVPNEKSFPRGGTIHSEVKTDDVSLNIVFGASQKKVKKAPKVKENLLSYE
TEEQNGQLEAFSAETLNMDTLQEDMLVMGVVKELTATALQIALPGRMFAR
TLVADISDAYTRVAKAAMSGDTSEYHDLTELFQLGRIVYGKAIKTEKLDT
GRVSLLLSLKPADVHGNLHHKSIKKGFIFSGAVAEALEHGYVIESGVQGL
QAFVPCEKPAQKLHVGQLAFLKVKTVHHDTHQSTCTCVQVEQDQLRIKSQ
NETNLDYILPGSIVKFKVAKHLKDGLKGSIMNESFSAYVNEHHLANALDT
LDAYELNEDYNARVLYVMPLTKLVYLTLNLDIKTGAAVAKDQDEEEQEVE
PIKVGSVVEKAKVLRLGSGGVVLLLNKKLKGIISYGSIRGNFKGNYDKDE
VLSKYGRKTKHKVRILGYDVIESLYYCSDDPNVVNEKLFCLEDINAGDLV
TAKIFKKDDKIKGWSVRIGKVNGILEQFYLAPNVRYDVGQSLKCRVLEVN
AERKICYVSNRAEYLGKGIKILTDYASAHVGNVYMGTVVRCEDTYVLVKF
GNGIKGVLHRQNLKENSSFFEGQTTKFRILTRNKDQITLTLPEDKFQLGE
ICPVEITNALDAGLEVKITFAAEDDEEDEDGNPKLEEFVGLIPLRLLSDH
LELLHAQMRVHPAGSYTDAACIMQNIFSLRDVPYFSGQLTKDWQSVQVGD
IIRSYVKHATDQVVDLMVCVRNYNKPVKVHVKMLRLNAVKNAPVELVPEQ
LLWVKVLSKEVETKTLTVSAKLTDVWSGDLSDTAKLVEGYLNEVAQIKAG
LEEASAPISKYSVGEKINVVFKGIDATTNDWVYTVEGNGKVSALLLSSLV
GTAKAPEMGSKHEAVILWIEYSSDVLLISNKKLDIAHISPSGELSTNLIG
KAGMKAKVLLKLESVAVCSLKKGTNPLVICPIRLHPNDIENSGSAELRQG
DFCNIAFIHDKLHIAVPETVWRLWRGVKRTAGTEVAPVKAKKAKVEESPK
QKKTTIEETSAQKKVKAKAKVETKTEAKAIPTKRKAEVVEKITNGQKKTQ
PLTNGIVKEKPKQNGKLFFEDKTPAKNAKSETPKSNGAEGKSRLPGVSSF
WEDDVNQSKEGSSDEDEELNVAETQKNAAKKKRLSAKEKAKAEIKEEQRL
REIEERNADPKARLETIDQYERLVIAQPNNSISWLKYIAFLLSNTEIEKA
RALARRAISTISFRETQELRNMWSALLNMELVYSNNFDDVLKEALNCNDP
LEIYISVVDILKKNKRKDRLSSVLTTVLNKFKTELRVWPVAAEAYFWLGK
SDQVHNLLQRALRALPNQEHIPCIVSFAKLYAKHDNNDMAQTLLDDVVTS
YPKRIDIWSVYVDMLIKAGLIDSARNVLERAVVQKLKPNKMQVIYKKYLQ
LEENHGTDATVAKVKQQAEQWVKNYAKTVKASFLDH
BO32747.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:28:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5728-PA | 1430 | CG5728-PA | 1..1430 | 1..1430 | 7279 | 100 | Plus |
