BO32750.complete Sequence
3913 bp assembled on 2012-09-18
GenBank Submission: KX797181
> BO32750.complete
GAAGTTATCAGTCGACATGTCCGACGAGGAGGAGGATTCCGTGTCCGAGG
GCTTCTCGGCCAGCGAGGATGAATGGAAGCCGAGCAAGGACGTCAAGGGA
GGCGAGTCCTCCGACGATGATGACAGCGATTTCGATGAGCTCCAGGCGGA
GGGAGGAGCAGCGGGCTCCAGTGGACGATCCTCCGCTGTAGCGGGAAAAA
GAGGCGATCACAAGGCACCAAGTGGCATCAAGGGCTCTTCGGTGAAGAAA
CGCAAGCCCACTGGTCAATCACTTCGCTCCAAGCTGTACAATAAGTACCG
ACCGCCTCCAAAGACCTTTCCCACTTCTCCTTCGCAACAGAAGGAGAACA
CTCCGCGGGCTTCGGGTTCAAAAAACGCCAAAACGCCCAATGAAAGCGGT
GCACGGAATCAGCACGGTCCTGCTGATTCCAGCAGCGAATCCAGTGTGGA
AGACTACCTAGTAAATCCAGCCGATCTTGATCTGCACTCAACCTTCTTTG
CCGGCGGCCAAAAAGAGAAGTCACCGGCGCCCCAATTCGATTGTAATGCG
GGCATCACAAATCTTTCAGACTCTGGATCGGAGGATAACAACGAGAGCAG
CTTCGAGGATAAAGCAGGCAATGCCTTCGACTTTCGCGGTCTCCTGGAGA
ACGCAAACAGTTTGGAGCGCACTAGGGATGCTTTAAGCAAACGAAATGTC
ACGGCCACTCCGCCAAGGAGCCAGGCTGCCACCATGGATGTCAATGCGCT
GCTTGCATTGGGCGAGAACCAAAACTACCAGAGTGTGGAGGTGGAGGAAC
GTGAAGGGAATCAGCGTAAGAAGGCGGGAAGAGGAGCACCAGCAGCGCCT
CCGACCCTTGATGAACCGTCACGCCTCAGCAAGACGAAGTCAACGCGAAT
AAAGCGACACACCAAGACGCGACCCGTCTCCACGGTGGTCGCCAACGCTG
GTGATACTGATGACTCCGATTTTGAGGAAGTGGCAGATGCAGATCTATCC
AGTGACCAGGACGATGGCGAGACGCCGAACATCTCAGGGGATTTGGAGAT
ACGCGTGGGACTGGAAGGGCTCCGTCCTACGAAGGAGCAAAAGACTCAAC
ACGAATTGGAGATGGCCCTAAAGCGTCGCCTTAACAGGGACATCAAGGAC
CGTCAGATTTTGCTGCACAAAGTCAGCCTAATGTGCCAAATAGCTCGCAG
CTTAAAGTACAATCGCCTGCTTAGCGAGTCAGATTCCCTGATGCAGGCTA
CCCTGAAACTCCTGCCAAGCCGAAACGCATATCCTACTGAACGAGGCACC
GAACTTAAATATCTGCAGTCGTTTGTCACGTGGTTCAAAACATCAATCAA
GCTGCTAAGTCCCAACTTATATTCCGCGCAGTCGCCTGCTACCAAGGAAG
CCATATTAGAGGCTTTACTGGAGCAGGTGAAGCGCAAGGAAGCCCGCTGC
AAGCAGGATATGATTTTCATATTCATTGCCCTTGCACGGGGAATGGGCAT
GCACTGTCGGCTAATTGTCAATCTCCAGCCAATGCCACTGCGTCCGGCGG
CCAGTGATTTGATTCCCATTAAGCTTAGGCCAGATGATAAAAACAAAAGC
CAAACAGTGGAATCCGAAAGGGAAAGCGAGGATGAGAAGCCTAAAAAAGA
TAAAAAGGCAGGGAAGCCAGCAGAAAAAGAAAGCAGTAAGTCAACTATTT
CCAAAGAGGCTGAAAAGAAAAACAATGCAAAAAAAGCTGAGGCTAAACCA
CTCAGTAAATCAACAACCAAGGGTTCAGAAACCACGAAATCAGGTACAGT
TCCGAAGGTTAAAAAGGAGCTAAGTCTCTCCTCGAAATTGGTTGAAAAAT
CAAAACATCAAAAAGCCTACACCTCCAGCAAATCGGACACTTCCTTTGAT
GAGAAACCAAGTACGTCGTCCAGCTCTAAATGTCTAAAAGAAGAATATTC
AGAACTGGGATTATCCAAAAAGTTATTAAAACCGACTCTATCCTCAAAAT
TGGTTTTAAAATCAAAAAATCAATCTTCATTTAGTTCCAATAAATCGGAC
ACTTCATTTGAGGAGAATCCCAGTACCTCATCAAGTTCCAAATCTTTAAA
AGAAGAGACAGCCAAGTTAAGTTCATCCAAACTCGAAGACAAAAAGGTCG
CAAGCCCTGCCGAAACTAAAACTAAAGTACAATCGTCCCTTCTAAAAAGG
GTCACCACTCAAAATATTTCTGAATCAGGCGATAGCAAGAAACCGAAAGT
GGCTCCTGTGGACACATTCTCTCCAGTGGCAGGTCGCACACGCAGAGCCA
CTGTGAAACCCAAAACAGAGGAAAAACCGCAGGTGGTTGGATCACCAGTT
ATACCTAAACTGATGCTGTCCAAAGTTAAGCAGCTAAATGCCAAGCATAG
TGATACGGAAAACGCTAGTCCTGCGAATAAACATCTGCAGGAACAGCGCA
ACACACGAGAAACTCGATCAAGGAGCAAGTCCCCGAAAGTACTTATATCC
CCTAGTTTCCTTAAAAAGAAATCCGACGGAGCCGATTCCACTTCAGACCC
TCAAAAGCATCAAATGGCGCCGGAAACTAAGGCGCGAATTTCGCCAAACT
TTCTGTCCGAAGCTTTGCCAGCTCGTCAGCTACGAAGCCGAGGTCAAAAA
GCCAGTAGTCTAGCCATTCCGCAATTAGACGGCGGTGACGATGTGCCGCT
ACCGAAAAAGCGCCCAAAACTGGAGAAGTTGAAAAATTCGCAAGATTCCG
ATGAGGTGTTTGAACCCGCCAAGCCGGTGAAAAAGGCTCCTGTACTGCCC
AAGTCAGTACAGAATCTGCGAAAAGATCGGCGAGTGATGTCAACAGATGA
TGAGGGCGGTTCCAGGCTCAATCGGAAAACGGACGCCTCTGACATGTGGG
TGGAAGTGTGGTCAGATGTGGAGGAGCAGTGGATCTGTATAGATCTGTTC
AAAGGCAAGCTACACTGCGTGGACACAATAAGGAAAAATGCAACGCCTGG
ATTAGCCTACGTCTTCGCCTTTCAGGATGATCAGAGTTTGAAGGATGTGA
CCGCCAGGTACTGCGCCAGTTGGAGCACCACTGTGCGCAAAGCCCGTGTA
GAAAAGGCGTGGCTAGATGAAACTATTGCTCCTTACCTCGGACGCCGCAC
CAAGCGCGATATAACAGAGGATGATCAGCTACGTCGCATTCACTCCGATA
AACCCTTGCCAAAGTCAATTTCCGAGTTCAAGGACCATCCGCTGTACGTG
CTAGAGCGGCACTTGCTTAAGTTCCAGGGTCTATATCCACCAGATGCGCC
TACATTGGGCTTTATCCGTGGTGAAGCGGTGTACTCCAGAGATTGTGTGC
ACCTCCTGCATTCTCGGGAAATATGGCTAAAAAGCGCACGGGTGGTGAAG
CTTGGCGAACAGCCGTACAAGGTGGTTAAGGCACGTCCAAAGTGGGATAG
GCTCACGCGCACTGTTATTAAGGACCAGCCATTGGAAATCTTCGGGTATT
GGCAAACTCAGGAATACGAGCCCCCAACTGCAGAGAATGGAATTGTGCCG
CGAAATGCCTACGGCAATGTTGAGCTCTTTAAGGACTGCATGCTGCCAAA
GAAGACGGTGCATTTGAGATTGCCCGGCTTGATGCGCATCTGTAAGAAGC
TGAATATTGATTGTGCCAATGCAGTGGTTGGCTTCGATTTTCATCAAGGC
GCTTGTCATCCCATGTACGATGGCTTCATTGTTTGCGAGGAATTCCGCGA
AGTGGTCACTGCTGCCTGGGAAGAGGATCAACAGGTACAAGTTCTCAAGG
AGCAGGAGAAGTACGAAACCCGCGTGTACGGAAACTGGAAGAAGCTGATC
AAGGGTCTCCTCATTCGCGAGCGACTCAAGAAAAAATATAACTTTGCAAG
CTTTCTAGACCAT
BO32750.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:12:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mus210-RA | 3882 | CG8153-PA | 1..3879 | 17..3895 | 19395 | 100 | Plus |
| mus210-RC | 3885 | CG8153-PC | 1..3882 | 17..3895 | 19330 | 99.9 | Plus |
| mus210-RD | 993 | CG8153-PD | 1..973 | 17..986 | 4785 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:12:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mus210-RA | 4275 | CG8153-RA | 271..4149 | 17..3895 | 19395 | 100 | Plus |
| mus210-RC | 4683 | CG8153-RC | 271..4152 | 17..3895 | 19330 | 99.9 | Plus |
| mus210-RD | 1390 | CG8153-RD | 271..1243 | 17..986 | 4785 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:12:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15314614..15316614 | 983..2983 | 10005 | 100 | Plus |
| 2R | 25286936 | 2R | 15312035..15312817 | 204..986 | 3915 | 100 | Plus |
| 2R | 25286936 | 2R | 15316679..15317147 | 2983..3451 | 2345 | 100 | Plus |
| 2R | 25286936 | 2R | 15317434..15317708 | 3621..3895 | 1375 | 100 | Plus |
| 2R | 25286936 | 2R | 15311780..15311967 | 17..204 | 940 | 100 | Plus |
| 2R | 25286936 | 2R | 15317208..15317377 | 3451..3620 | 850 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:12:22 has no hits.
BO32750.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-18 16:29:42 Download gff for
BO32750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mus210-RA | 295..4173 | 17..3897 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:07 Download gff for
BO32750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mus210-RA | 271..4149 | 17..3897 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:23:19 Download gff for
BO32750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mus210-RA | 271..4149 | 17..3897 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:23:19 Download gff for
BO32750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15317434..15317708 | 3621..3897 | 99 | | Plus |
| 2R | 15311780..15311967 | 17..204 | 100 | -> | Plus |
| 2R | 15312036..15312817 | 205..986 | 100 | -> | Plus |
| 2R | 15314618..15316614 | 987..2983 | 100 | -> | Plus |
| 2R | 15316680..15317147 | 2984..3451 | 100 | -> | Plus |
| 2R | 15317209..15317377 | 3452..3620 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:07 Download gff for
BO32750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11199285..11199472 | 17..204 | 100 | -> | Plus |
| arm_2R | 11199541..11200322 | 205..986 | 100 | -> | Plus |
| arm_2R | 11202123..11204119 | 987..2983 | 100 | -> | Plus |
| arm_2R | 11204185..11204652 | 2984..3451 | 100 | -> | Plus |
| arm_2R | 11204714..11204882 | 3452..3620 | 100 | -> | Plus |
| arm_2R | 11204939..11205213 | 3621..3897 | 99 | | Plus |
BO32750.pep Sequence
Translation from 16 to 3913
> BO32750.pep
MSDEEEDSVSEGFSASEDEWKPSKDVKGGESSDDDDSDFDELQAEGGAAG
SSGRSSAVAGKRGDHKAPSGIKGSSVKKRKPTGQSLRSKLYNKYRPPPKT
FPTSPSQQKENTPRASGSKNAKTPNESGARNQHGPADSSSESSVEDYLVN
PADLDLHSTFFAGGQKEKSPAPQFDCNAGITNLSDSGSEDNNESSFEDKA
GNAFDFRGLLENANSLERTRDALSKRNVTATPPRSQAATMDVNALLALGE
NQNYQSVEVEEREGNQRKKAGRGAPAAPPTLDEPSRLSKTKSTRIKRHTK
TRPVSTVVANAGDTDDSDFEEVADADLSSDQDDGETPNISGDLEIRVGLE
GLRPTKEQKTQHELEMALKRRLNRDIKDRQILLHKVSLMCQIARSLKYNR
LLSESDSLMQATLKLLPSRNAYPTERGTELKYLQSFVTWFKTSIKLLSPN
LYSAQSPATKEAILEALLEQVKRKEARCKQDMIFIFIALARGMGMHCRLI
VNLQPMPLRPAASDLIPIKLRPDDKNKSQTVESERESEDEKPKKDKKAGK
PAEKESSKSTISKEAEKKNNAKKAEAKPLSKSTTKGSETTKSGTVPKVKK
ELSLSSKLVEKSKHQKAYTSSKSDTSFDEKPSTSSSSKCLKEEYSELGLS
KKLLKPTLSSKLVLKSKNQSSFSSNKSDTSFEENPSTSSSSKSLKEETAK
LSSSKLEDKKVASPAETKTKVQSSLLKRVTTQNISESGDSKKPKVAPVDT
FSPVAGRTRRATVKPKTEEKPQVVGSPVIPKLMLSKVKQLNAKHSDTENA
SPANKHLQEQRNTRETRSRSKSPKVLISPSFLKKKSDGADSTSDPQKHQM
APETKARISPNFLSEALPARQLRSRGQKASSLAIPQLDGGDDVPLPKKRP
KLEKLKNSQDSDEVFEPAKPVKKAPVLPKSVQNLRKDRRVMSTDDEGGSR
LNRKTDASDMWVEVWSDVEEQWICIDLFKGKLHCVDTIRKNATPGLAYVF
AFQDDQSLKDVTARYCASWSTTVRKARVEKAWLDETIAPYLGRRTKRDIT
EDDQLRRIHSDKPLPKSISEFKDHPLYVLERHLLKFQGLYPPDAPTLGFI
RGEAVYSRDCVHLLHSREIWLKSARVVKLGEQPYKVVKARPKWDRLTRTV
IKDQPLEIFGYWQTQEYEPPTAENGIVPRNAYGNVELFKDCMLPKKTVHL
RLPGLMRICKKLNIDCANAVVGFDFHQGACHPMYDGFIVCEEFREVVTAA
WEEDQQVQVLKEQEKYETRVYGNWKKLIKGLLIRERLKKKYNFASFLDH
BO32750.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mus210-PA | 1293 | CG8153-PA | 1..1293 | 1..1293 | 6633 | 100 | Plus |
| mus210-PC | 1294 | CG8153-PC | 1..1294 | 1..1293 | 6621 | 99.9 | Plus |
| mus210-PD | 330 | CG8153-PD | 1..324 | 1..323 | 1649 | 99.7 | Plus |
| Nopp140-PF | 685 | CG7421-PF | 144..534 | 507..881 | 200 | 24.9 | Plus |
| Nopp140-PB | 686 | CG7421-PB | 144..534 | 507..881 | 200 | 24.9 | Plus |
