BO32751.complete Sequence
4135 bp assembled on 2012-07-27
GenBank Submission: KX794745
> BO32751.complete
GAAGTTATCAGTCGACATGGAAAAGCGGCTTAGCGACAGTCCCGGAGATT
GTCGCGTAACGAGATCCACCATGACGCCCACTCTGCGCCTGGATCAGACT
TCCAGGCAAGAGCCTCTGCCCCAGCAGCCGGATAATGGCCCAGCTGCAGC
GCCTGGAAAGTCTAAGTCCCCCACTCCGTTGCCCGGAAAATCACAGGCCG
CCCAGCATCACCAGTTCCGCGCTCCGCAGCAGCAGCAGGGCCCGAAAAAC
CGGAACAAGGCCTGGAGTAAGAGGCAACACAAGGCCGGCGGGAAGCACAA
CCCCAGTGCCTGTGTCGGCGCAAGCAGTGGCCAGGCCCAGTCTACGGGCT
CCTCTGTCATAGCCGCGACTCTCCTTCCCACTGCGGCGTCGGCTCACAAG
GCGGATCTCGAGAACATCCAGAATATCCATAACAAAAATCTGACTGCCGG
CGGTGGAGTCAACCATCATGGGAACGCCGGAACAGCGCATCACGGCGGTG
GCGGTGGTGCCGGCGCCCATCATGCCGCAGCGGGTGGCCACCATCACCAT
CACAACACGAGGCTGGCGCAAAACGCTGCCGCTGGTGGAGCCAGCGGAGG
AGGAACCATTCAAATGCATAAGAAAATGTTAAGAGGTCACCATCACCACG
TGCTGTGCGCCGGAAACAATGCTAACCACACGTGCTGCCTGGTGACGGGA
TGCAACGGCAGCTCTATCGGCGGAGTAGGCGTGGCAGGAAGCGGAGGAGC
TACCGCCTCAGCGGGGGGCGGCGGAGCGTCGTGCAAGGAAGCGCAGAGCT
GCAAGGACACCAGCTCGCTGAGCGGCAACAGCAGCATTGCGGGCAGCGCT
GGAGCGGGCAACGCAGTCCACTATTGCTGCGGCCGCTCCAAGTTCTTTTT
GCCGGAGAAGAGGTTACGCAAGGAGGTGATTGTACCGCCCACCAAGTTTC
TGCTGGGCGGCAACATCTCCGATCCACTCAACCTTAATTCGCTGCAGAAC
GAGAACACCTCGAATGCCTCCTCCACCAACAACACGCCGGCGACCACGCC
CCGCCAGTCGCCCATCACTACGCCTCCGAAAGTGGAGGTGATCATACCGC
CTAACATCCACGATCCGCTCCACCTGCTGGACCCCGTTGATTCCATGGAG
TACGAGAAGCAGCTGACGTCGCCGATGAAGCGCGCTGGGCCAGGAGGTGG
GATGCTCCACCACCGGCAGCACCACTATCGCACGCGAAAGAACCGAAAGC
GACGGCGCTTTGACTCCAACAACACCTCGCATGCCGGCGATGAAGGAGGG
GTCGGAAGCGAGCTGACCGACGAACCGCCGCTGCCCGCAGCCACCTCTTC
GCTGGCGGCGTCGCCGGTGGCAGCGCCCCTTAACGTAGGCGGCAGCTTGC
TGCTGAGCGAATCCGCTGCCCCAGCCCCGGGCGAAACGGCGGAAATGGGA
CAACAGCAGGAGCAGGCGCATGTGCACTCTCCGCAGTCGGCATCAACGAC
GACGACCGCCGCTGAGATGCCCACCCCGACGCCAACCAGTGCAGCGGCAG
CGACTGCGACCGCGGAGCACAAGGAGCAGTCGGCTCCAGCGCCGACTGCA
ACGTCGTCGCCACAGCGGCAGCAGCAACATGTGGCCGCTGCAGCCGAGGA
ACTCCCCACTCCGGAAACTTCCGCTGCTGCTGAGACGCCGGCAGAGGAGA
TGCTCCTTAGCTGTTCGGCCACGTCGGCCTCACTGGTGGCTTCGACGCTG
GCAGAGCGAAGGGCCAGCCGAGACCTGCGTCTGGACTTGTCGAGCACGTG
CTACGGCGTTGGCGGCACGGGTCTGAGCTTCGGCGGCAGCATCTCATCCA
GCGTCGGCAGTAGCTTTGGTGGCGGTGGGAGGAAGAGGAAAATCAGCGAG
AGCAGCACTTCGCAAAAGAGCAAGAAATTTCATCGTCACGATGCCATGGA
CAAGATTGTCAGTCCAGTGGTTCCGCAGCCAGGAGCCTGGAAGAGACCGC
CACGCATCCTTCAGCCCAGCGGAGCTAGGAAGCCCAGCACCCGCCGCTCT
ACGTCCGTCAGCGAATCGGAACTACTCAGTCCCGTGGAAGAGCAGCCGCC
CAAACAGCTGCCCCTCATCGGGGTGGAGATACCCCGTGATGACACGCCGG
ATTTGCCGGATCATGGGCTAGGCAGTCCGCTGAGCACTACTTCGGGGGCC
ACCTCGCACACGGCCGGCGAGCAGGATTCTCTGGCCGGTGTGGACATCAG
CATGGGGGATACATTGGGGTCTGGGGTCGTGGGCAAGGCACCGCTGACTA
GTAGTCTTATGCTGGAACCGGCTAAAATTCCACCAATTAAAATGCTGCCA
AAGTTTCGGGCCGATGGATTAAAGTACCGGTACGGAAACTTCGACCGCTA
CGTGGACTTTCGGCAGATGAACGAGTTTCGAGACGTGCGCTTGCAGGTTT
TCCAGCGTCACGTGGAACTGTTCGAGAACAAGGACATTCTAGACATTGGC
TGCAATGTTGGCCACATGACCATTACGGTGGCCAGACATCTGGCACCAAA
AACAATTGTCGGTATTGACATTGACCGGGAGCTTGTTGCACGAGCAAGGA
GAAATCTGTCGATCTTTGTGCGTATTCCCAAGGAGGAAAAGCTGCTGGAG
GTCAAAGCAGAGCCAACGGTTGATGCAAAAGCGAATATCGCGGTGAAGGA
TGAGACATCTGGAGCAGCTCACAAGAAAACGAGACGGGGCAAGAGGAGAC
GCAAGGTGCATCAAGGAATACATCATCATCACCATCATCATCATGATTTA
GAACAGCTGCAACAGCAACAGAAGTTGAACTCGTTGCTTGTTAAGCCACA
CGAATTCTTTCCCATTTCTTTCCCTCTGACCTACGGACGTATTCCCCGTA
TTTTATCATCGAGTAAATCGCCCAACATGCTCGGGAACAAGAATCAGTTT
CCGGCAAACGTCTTCTTCAGACACACCAACTATGTTCTCAAGGACGAGTC
ATTGATGGCCAGCGATACCCAGCAATACGATCTCATACTGTGTCTCTCAG
TTACTAAGTGGATCCATCTCAACTTTGGAGACAACGGCTTGAAGATGGCA
TTTAAGCGCATGTTCAACCAGCTGCGACCCGGTGGAAAACTTATACTTGA
AGCCCAAAACTGGGCCAGCTACAAGAAGAAAAAGAACCTAACGCCGGAAA
TATATAACAACTACAAGCAGATCGAGTTCTTTCCGAACAAGTTTCACGAA
TACTTGCTTAGTTCGGAGGTAGGATTCAGTCACAGCTATACGCTTGGCGT
GCCCCGTCACATGAACAAGGGCTTCTGCCGACCCATACAGTTGTATGCAA
AGGGCGATTATACCCCGAATCACGTCCGTTGGAGCGATGCATATTATCCC
CAGACGCCATATGAAGCATATCGGGGCATTTACGCCACCCTGCCCGTTCA
CCGGATGGGCGGCGGTGGGAGCAGCGCGGGCGGTAGCAATAGTGGGCATG
CTCAAATGCTGCACCTTAGCAGCTCCAGTCGGTCGCAGAACTATGATACG
CCGCACTACGCAGGTAGCGCATCGGGATCGGCCAGCTGCAGACAGACTCC
AATGTACCAGCCCACCTACAACCCGTTGGAAACGGACTCATACCAGCCAA
GCTACGACATGGAATATCTCAACCACATGTACGTGTTCGCCTCGCCGCTT
TACCAGACCGTCTGGTCACCTCCAGCCTCGCTGCGCAAAAGCAGCTCGCA
TACTCCGGTATTTGGAAGCGTGCGCGATGCAGAGCTGGACGGTGATGGCA
GTGGTGGTGGGGGCAGTGGTGGCGGAAGCTACCACCGCCACGTCTATCCG
CCAAACGACGACACTTGTTCGCCCAACGCAAACGCTTGTAATGCGTTTAA
CTCGATTCGGGACGCGGACACAGACGATTCTAACCAGCTGCCTGGGGGAA
GTCGACGACATGTGTATGCAACCAACTGCGGAGAGAGCTCCTCATCGCCG
CAGGTAAATCACCACGATGCGGTTGGCGAATTTGTGGACGGTCTTATGGA
CGACGAACAGAAGTCTTCAACAGGCGGAGGAACTGGTGGCGCAGCTTATT
GTGATCTGTCGGATGCCGCAAGCTTTCTAGACCAT
BO32751.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:53:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bin3-RD | 4104 | CG8276-PD | 1..4101 | 17..4117 | 20430 | 99.9 | Plus |
bin3-RA | 4104 | CG8276-PA | 1..4101 | 17..4117 | 20430 | 99.9 | Plus |
bin3-RB | 4104 | CG8276-PB | 1..4101 | 17..4117 | 20430 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:53:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bin3-RD | 5616 | CG8276-RD | 673..4773 | 17..4117 | 20430 | 99.9 | Plus |
bin3-RA | 5606 | CG8276-RA | 663..4763 | 17..4117 | 20430 | 99.9 | Plus |
bin3-RB | 4760 | CG8276-RB | 610..4710 | 17..4117 | 20430 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:53:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 6234767..6236059 | 632..1924 | 6465 | 100 | Plus |
2R | 25286936 | 2R | 6237602..6238672 | 2123..3193 | 5355 | 100 | Plus |
2R | 25286936 | 2R | 6238981..6239759 | 3339..4117 | 3880 | 99.9 | Plus |
2R | 25286936 | 2R | 6233691..6234304 | 17..630 | 3040 | 99.7 | Plus |
2R | 25286936 | 2R | 6237341..6237541 | 1923..2123 | 1005 | 100 | Plus |
2R | 25286936 | 2R | 6238763..6238910 | 3193..3340 | 725 | 99.3 | Plus |
Blast to na_te.dros performed 2014-11-28 11:53:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1511..1583 | 2752..2824 | 149 | 67.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6832 | 2713..2824 | 140 | 60.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6745..6799 | 2770..2824 | 122 | 69.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2392 | 2738..2823 | 120 | 61.4 | Plus |
BO32751.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-27 18:43:26 Download gff for
BO32751.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bin3-RA | 664..4764 | 17..4119 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:16 Download gff for
BO32751.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bin3-RC | 568..4668 | 17..4119 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:52:49 Download gff for
BO32751.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bin3-RB | 610..4710 | 17..4119 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:52:49 Download gff for
BO32751.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 6233691..6234307 | 17..633 | 99 | -> | Plus |
2R | 6234769..6236059 | 634..1924 | 100 | -> | Plus |
2R | 6237343..6237541 | 1925..2123 | 100 | -> | Plus |
2R | 6237603..6238672 | 2124..3193 | 100 | -> | Plus |
2R | 6238764..6238910 | 3194..3340 | 99 | -> | Plus |
2R | 6238983..6239759 | 3341..4119 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:16 Download gff for
BO32751.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 2126488..2127264 | 3341..4119 | 99 | | Plus |
arm_2R | 2121196..2121812 | 17..633 | 99 | -> | Plus |
arm_2R | 2122274..2123564 | 634..1924 | 100 | -> | Plus |
arm_2R | 2124848..2125046 | 1925..2123 | 100 | -> | Plus |
arm_2R | 2125108..2126177 | 2124..3193 | 100 | -> | Plus |
arm_2R | 2126269..2126415 | 3194..3340 | 99 | -> | Plus |
BO32751.pep Sequence
Translation from 16 to 4135
> BO32751.pep
MEKRLSDSPGDCRVTRSTMTPTLRLDQTSRQEPLPQQPDNGPAAAPGKSK
SPTPLPGKSQAAQHHQFRAPQQQQGPKNRNKAWSKRQHKAGGKHNPSACV
GASSGQAQSTGSSVIAATLLPTAASAHKADLENIQNIHNKNLTAGGGVNH
HGNAGTAHHGGGGGAGAHHAAAGGHHHHHNTRLAQNAAAGGASGGGTIQM
HKKMLRGHHHHVLCAGNNANHTCCLVTGCNGSSIGGVGVAGSGGATASAG
GGGASCKEAQSCKDTSSLSGNSSIAGSAGAGNAVHYCCGRSKFFLPEKRL
RKEVIVPPTKFLLGGNISDPLNLNSLQNENTSNASSTNNTPATTPRQSPI
TTPPKVEVIIPPNIHDPLHLLDPVDSMEYEKQLTSPMKRAGPGGGMLHHR
QHHYRTRKNRKRRRFDSNNTSHAGDEGGVGSELTDEPPLPAATSSLAASP
VAAPLNVGGSLLLSESAAPAPGETAEMGQQQEQAHVHSPQSASTTTTAAE
MPTPTPTSAAAATATAEHKEQSAPAPTATSSPQRQQQHVAAAAEELPTPE
TSAAAETPAEEMLLSCSATSASLVASTLAERRASRDLRLDLSSTCYGVGG
TGLSFGGSISSSVGSSFGGGGRKRKISESSTSQKSKKFHRHDAMDKIVSP
VVPQPGAWKRPPRILQPSGARKPSTRRSTSVSESELLSPVEEQPPKQLPL
IGVEIPRDDTPDLPDHGLGSPLSTTSGATSHTAGEQDSLAGVDISMGDTL
GSGVVGKAPLTSSLMLEPAKIPPIKMLPKFRADGLKYRYGNFDRYVDFRQ
MNEFRDVRLQVFQRHVELFENKDILDIGCNVGHMTITVARHLAPKTIVGI
DIDRELVARARRNLSIFVRIPKEEKLLEVKAEPTVDAKANIAVKDETSGA
AHKKTRRGKRRRKVHQGIHHHHHHHHDLEQLQQQQKLNSLLVKPHEFFPI
SFPLTYGRIPRILSSSKSPNMLGNKNQFPANVFFRHTNYVLKDESLMASD
TQQYDLILCLSVTKWIHLNFGDNGLKMAFKRMFNQLRPGGKLILEAQNWA
SYKKKKNLTPEIYNNYKQIEFFPNKFHEYLLSSEVGFSHSYTLGVPRHMN
KGFCRPIQLYAKGDYTPNHVRWSDAYYPQTPYEAYRGIYATLPVHRMGGG
GSSAGGSNSGHAQMLHLSSSSRSQNYDTPHYAGSASGSASCRQTPMYQPT
YNPLETDSYQPSYDMEYLNHMYVFASPLYQTVWSPPASLRKSSSHTPVFG
SVRDAELDGDGSGGGGSGGGSYHRHVYPPNDDTCSPNANACNAFNSIRDA
DTDDSNQLPGGSRRHVYATNCGESSSSPQVNHHDAVGEFVDGLMDDEQKS
STGGGTGGAAYCDLSDAASFLDH
BO32751.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:15:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bin3-PD | 1367 | CG8276-PD | 1..1367 | 1..1367 | 7243 | 100 | Plus |
bin3-PA | 1367 | CG8276-PA | 1..1367 | 1..1367 | 7243 | 100 | Plus |
bin3-PB | 1367 | CG8276-PB | 1..1367 | 1..1367 | 7243 | 100 | Plus |
bin3-PC | 1367 | CG8276-PC | 1..1367 | 1..1367 | 7243 | 100 | Plus |
CG1239-PC | 300 | CG1239-PC | 168..299 | 981..1112 | 399 | 56.1 | Plus |