Clone BO32751 Report

Search the DGRC for BO32751

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:327
Well:51
Vector:pDNR-Dual
Associated Gene/Transcriptbin3-RA
Protein status:BO32751.pep: Imported from assembly
Sequenced Size:4135

Clone Sequence Records

BO32751.complete Sequence

4135 bp assembled on 2012-07-27

GenBank Submission: KX794745

> BO32751.complete
GAAGTTATCAGTCGACATGGAAAAGCGGCTTAGCGACAGTCCCGGAGATT
GTCGCGTAACGAGATCCACCATGACGCCCACTCTGCGCCTGGATCAGACT
TCCAGGCAAGAGCCTCTGCCCCAGCAGCCGGATAATGGCCCAGCTGCAGC
GCCTGGAAAGTCTAAGTCCCCCACTCCGTTGCCCGGAAAATCACAGGCCG
CCCAGCATCACCAGTTCCGCGCTCCGCAGCAGCAGCAGGGCCCGAAAAAC
CGGAACAAGGCCTGGAGTAAGAGGCAACACAAGGCCGGCGGGAAGCACAA
CCCCAGTGCCTGTGTCGGCGCAAGCAGTGGCCAGGCCCAGTCTACGGGCT
CCTCTGTCATAGCCGCGACTCTCCTTCCCACTGCGGCGTCGGCTCACAAG
GCGGATCTCGAGAACATCCAGAATATCCATAACAAAAATCTGACTGCCGG
CGGTGGAGTCAACCATCATGGGAACGCCGGAACAGCGCATCACGGCGGTG
GCGGTGGTGCCGGCGCCCATCATGCCGCAGCGGGTGGCCACCATCACCAT
CACAACACGAGGCTGGCGCAAAACGCTGCCGCTGGTGGAGCCAGCGGAGG
AGGAACCATTCAAATGCATAAGAAAATGTTAAGAGGTCACCATCACCACG
TGCTGTGCGCCGGAAACAATGCTAACCACACGTGCTGCCTGGTGACGGGA
TGCAACGGCAGCTCTATCGGCGGAGTAGGCGTGGCAGGAAGCGGAGGAGC
TACCGCCTCAGCGGGGGGCGGCGGAGCGTCGTGCAAGGAAGCGCAGAGCT
GCAAGGACACCAGCTCGCTGAGCGGCAACAGCAGCATTGCGGGCAGCGCT
GGAGCGGGCAACGCAGTCCACTATTGCTGCGGCCGCTCCAAGTTCTTTTT
GCCGGAGAAGAGGTTACGCAAGGAGGTGATTGTACCGCCCACCAAGTTTC
TGCTGGGCGGCAACATCTCCGATCCACTCAACCTTAATTCGCTGCAGAAC
GAGAACACCTCGAATGCCTCCTCCACCAACAACACGCCGGCGACCACGCC
CCGCCAGTCGCCCATCACTACGCCTCCGAAAGTGGAGGTGATCATACCGC
CTAACATCCACGATCCGCTCCACCTGCTGGACCCCGTTGATTCCATGGAG
TACGAGAAGCAGCTGACGTCGCCGATGAAGCGCGCTGGGCCAGGAGGTGG
GATGCTCCACCACCGGCAGCACCACTATCGCACGCGAAAGAACCGAAAGC
GACGGCGCTTTGACTCCAACAACACCTCGCATGCCGGCGATGAAGGAGGG
GTCGGAAGCGAGCTGACCGACGAACCGCCGCTGCCCGCAGCCACCTCTTC
GCTGGCGGCGTCGCCGGTGGCAGCGCCCCTTAACGTAGGCGGCAGCTTGC
TGCTGAGCGAATCCGCTGCCCCAGCCCCGGGCGAAACGGCGGAAATGGGA
CAACAGCAGGAGCAGGCGCATGTGCACTCTCCGCAGTCGGCATCAACGAC
GACGACCGCCGCTGAGATGCCCACCCCGACGCCAACCAGTGCAGCGGCAG
CGACTGCGACCGCGGAGCACAAGGAGCAGTCGGCTCCAGCGCCGACTGCA
ACGTCGTCGCCACAGCGGCAGCAGCAACATGTGGCCGCTGCAGCCGAGGA
ACTCCCCACTCCGGAAACTTCCGCTGCTGCTGAGACGCCGGCAGAGGAGA
TGCTCCTTAGCTGTTCGGCCACGTCGGCCTCACTGGTGGCTTCGACGCTG
GCAGAGCGAAGGGCCAGCCGAGACCTGCGTCTGGACTTGTCGAGCACGTG
CTACGGCGTTGGCGGCACGGGTCTGAGCTTCGGCGGCAGCATCTCATCCA
GCGTCGGCAGTAGCTTTGGTGGCGGTGGGAGGAAGAGGAAAATCAGCGAG
AGCAGCACTTCGCAAAAGAGCAAGAAATTTCATCGTCACGATGCCATGGA
CAAGATTGTCAGTCCAGTGGTTCCGCAGCCAGGAGCCTGGAAGAGACCGC
CACGCATCCTTCAGCCCAGCGGAGCTAGGAAGCCCAGCACCCGCCGCTCT
ACGTCCGTCAGCGAATCGGAACTACTCAGTCCCGTGGAAGAGCAGCCGCC
CAAACAGCTGCCCCTCATCGGGGTGGAGATACCCCGTGATGACACGCCGG
ATTTGCCGGATCATGGGCTAGGCAGTCCGCTGAGCACTACTTCGGGGGCC
ACCTCGCACACGGCCGGCGAGCAGGATTCTCTGGCCGGTGTGGACATCAG
CATGGGGGATACATTGGGGTCTGGGGTCGTGGGCAAGGCACCGCTGACTA
GTAGTCTTATGCTGGAACCGGCTAAAATTCCACCAATTAAAATGCTGCCA
AAGTTTCGGGCCGATGGATTAAAGTACCGGTACGGAAACTTCGACCGCTA
CGTGGACTTTCGGCAGATGAACGAGTTTCGAGACGTGCGCTTGCAGGTTT
TCCAGCGTCACGTGGAACTGTTCGAGAACAAGGACATTCTAGACATTGGC
TGCAATGTTGGCCACATGACCATTACGGTGGCCAGACATCTGGCACCAAA
AACAATTGTCGGTATTGACATTGACCGGGAGCTTGTTGCACGAGCAAGGA
GAAATCTGTCGATCTTTGTGCGTATTCCCAAGGAGGAAAAGCTGCTGGAG
GTCAAAGCAGAGCCAACGGTTGATGCAAAAGCGAATATCGCGGTGAAGGA
TGAGACATCTGGAGCAGCTCACAAGAAAACGAGACGGGGCAAGAGGAGAC
GCAAGGTGCATCAAGGAATACATCATCATCACCATCATCATCATGATTTA
GAACAGCTGCAACAGCAACAGAAGTTGAACTCGTTGCTTGTTAAGCCACA
CGAATTCTTTCCCATTTCTTTCCCTCTGACCTACGGACGTATTCCCCGTA
TTTTATCATCGAGTAAATCGCCCAACATGCTCGGGAACAAGAATCAGTTT
CCGGCAAACGTCTTCTTCAGACACACCAACTATGTTCTCAAGGACGAGTC
ATTGATGGCCAGCGATACCCAGCAATACGATCTCATACTGTGTCTCTCAG
TTACTAAGTGGATCCATCTCAACTTTGGAGACAACGGCTTGAAGATGGCA
TTTAAGCGCATGTTCAACCAGCTGCGACCCGGTGGAAAACTTATACTTGA
AGCCCAAAACTGGGCCAGCTACAAGAAGAAAAAGAACCTAACGCCGGAAA
TATATAACAACTACAAGCAGATCGAGTTCTTTCCGAACAAGTTTCACGAA
TACTTGCTTAGTTCGGAGGTAGGATTCAGTCACAGCTATACGCTTGGCGT
GCCCCGTCACATGAACAAGGGCTTCTGCCGACCCATACAGTTGTATGCAA
AGGGCGATTATACCCCGAATCACGTCCGTTGGAGCGATGCATATTATCCC
CAGACGCCATATGAAGCATATCGGGGCATTTACGCCACCCTGCCCGTTCA
CCGGATGGGCGGCGGTGGGAGCAGCGCGGGCGGTAGCAATAGTGGGCATG
CTCAAATGCTGCACCTTAGCAGCTCCAGTCGGTCGCAGAACTATGATACG
CCGCACTACGCAGGTAGCGCATCGGGATCGGCCAGCTGCAGACAGACTCC
AATGTACCAGCCCACCTACAACCCGTTGGAAACGGACTCATACCAGCCAA
GCTACGACATGGAATATCTCAACCACATGTACGTGTTCGCCTCGCCGCTT
TACCAGACCGTCTGGTCACCTCCAGCCTCGCTGCGCAAAAGCAGCTCGCA
TACTCCGGTATTTGGAAGCGTGCGCGATGCAGAGCTGGACGGTGATGGCA
GTGGTGGTGGGGGCAGTGGTGGCGGAAGCTACCACCGCCACGTCTATCCG
CCAAACGACGACACTTGTTCGCCCAACGCAAACGCTTGTAATGCGTTTAA
CTCGATTCGGGACGCGGACACAGACGATTCTAACCAGCTGCCTGGGGGAA
GTCGACGACATGTGTATGCAACCAACTGCGGAGAGAGCTCCTCATCGCCG
CAGGTAAATCACCACGATGCGGTTGGCGAATTTGTGGACGGTCTTATGGA
CGACGAACAGAAGTCTTCAACAGGCGGAGGAACTGGTGGCGCAGCTTATT
GTGATCTGTCGGATGCCGCAAGCTTTCTAGACCAT

BO32751.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:53:05
Subject Length Description Subject Range Query Range Score Percent Strand
bin3-RD 4104 CG8276-PD 1..4101 17..4117 20430 99.9 Plus
bin3-RA 4104 CG8276-PA 1..4101 17..4117 20430 99.9 Plus
bin3-RB 4104 CG8276-PB 1..4101 17..4117 20430 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:53:07
Subject Length Description Subject Range Query Range Score Percent Strand
bin3-RD 5616 CG8276-RD 673..4773 17..4117 20430 99.9 Plus
bin3-RA 5606 CG8276-RA 663..4763 17..4117 20430 99.9 Plus
bin3-RB 4760 CG8276-RB 610..4710 17..4117 20430 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:53:02
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6234767..6236059 632..1924 6465 100 Plus
2R 25286936 2R 6237602..6238672 2123..3193 5355 100 Plus
2R 25286936 2R 6238981..6239759 3339..4117 3880 99.9 Plus
2R 25286936 2R 6233691..6234304 17..630 3040 99.7 Plus
2R 25286936 2R 6237341..6237541 1923..2123 1005 100 Plus
2R 25286936 2R 6238763..6238910 3193..3340 725 99.3 Plus
Blast to na_te.dros performed 2014-11-28 11:53:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1511..1583 2752..2824 149 67.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6723..6832 2713..2824 140 60.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6745..6799 2770..2824 122 69.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2392 2738..2823 120 61.4 Plus

BO32751.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-27 18:43:26 Download gff for BO32751.complete
Subject Subject Range Query Range Percent Splice Strand
bin3-RA 664..4764 17..4119 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:16 Download gff for BO32751.complete
Subject Subject Range Query Range Percent Splice Strand
bin3-RC 568..4668 17..4119 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:52:49 Download gff for BO32751.complete
Subject Subject Range Query Range Percent Splice Strand
bin3-RB 610..4710 17..4119 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:52:49 Download gff for BO32751.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6233691..6234307 17..633 99 -> Plus
2R 6234769..6236059 634..1924 100 -> Plus
2R 6237343..6237541 1925..2123 100 -> Plus
2R 6237603..6238672 2124..3193 100 -> Plus
2R 6238764..6238910 3194..3340 99 -> Plus
2R 6238983..6239759 3341..4119 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:16 Download gff for BO32751.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2126488..2127264 3341..4119 99   Plus
arm_2R 2121196..2121812 17..633 99 -> Plus
arm_2R 2122274..2123564 634..1924 100 -> Plus
arm_2R 2124848..2125046 1925..2123 100 -> Plus
arm_2R 2125108..2126177 2124..3193 100 -> Plus
arm_2R 2126269..2126415 3194..3340 99 -> Plus

BO32751.pep Sequence

Translation from 16 to 4135

> BO32751.pep
MEKRLSDSPGDCRVTRSTMTPTLRLDQTSRQEPLPQQPDNGPAAAPGKSK
SPTPLPGKSQAAQHHQFRAPQQQQGPKNRNKAWSKRQHKAGGKHNPSACV
GASSGQAQSTGSSVIAATLLPTAASAHKADLENIQNIHNKNLTAGGGVNH
HGNAGTAHHGGGGGAGAHHAAAGGHHHHHNTRLAQNAAAGGASGGGTIQM
HKKMLRGHHHHVLCAGNNANHTCCLVTGCNGSSIGGVGVAGSGGATASAG
GGGASCKEAQSCKDTSSLSGNSSIAGSAGAGNAVHYCCGRSKFFLPEKRL
RKEVIVPPTKFLLGGNISDPLNLNSLQNENTSNASSTNNTPATTPRQSPI
TTPPKVEVIIPPNIHDPLHLLDPVDSMEYEKQLTSPMKRAGPGGGMLHHR
QHHYRTRKNRKRRRFDSNNTSHAGDEGGVGSELTDEPPLPAATSSLAASP
VAAPLNVGGSLLLSESAAPAPGETAEMGQQQEQAHVHSPQSASTTTTAAE
MPTPTPTSAAAATATAEHKEQSAPAPTATSSPQRQQQHVAAAAEELPTPE
TSAAAETPAEEMLLSCSATSASLVASTLAERRASRDLRLDLSSTCYGVGG
TGLSFGGSISSSVGSSFGGGGRKRKISESSTSQKSKKFHRHDAMDKIVSP
VVPQPGAWKRPPRILQPSGARKPSTRRSTSVSESELLSPVEEQPPKQLPL
IGVEIPRDDTPDLPDHGLGSPLSTTSGATSHTAGEQDSLAGVDISMGDTL
GSGVVGKAPLTSSLMLEPAKIPPIKMLPKFRADGLKYRYGNFDRYVDFRQ
MNEFRDVRLQVFQRHVELFENKDILDIGCNVGHMTITVARHLAPKTIVGI
DIDRELVARARRNLSIFVRIPKEEKLLEVKAEPTVDAKANIAVKDETSGA
AHKKTRRGKRRRKVHQGIHHHHHHHHDLEQLQQQQKLNSLLVKPHEFFPI
SFPLTYGRIPRILSSSKSPNMLGNKNQFPANVFFRHTNYVLKDESLMASD
TQQYDLILCLSVTKWIHLNFGDNGLKMAFKRMFNQLRPGGKLILEAQNWA
SYKKKKNLTPEIYNNYKQIEFFPNKFHEYLLSSEVGFSHSYTLGVPRHMN
KGFCRPIQLYAKGDYTPNHVRWSDAYYPQTPYEAYRGIYATLPVHRMGGG
GSSAGGSNSGHAQMLHLSSSSRSQNYDTPHYAGSASGSASCRQTPMYQPT
YNPLETDSYQPSYDMEYLNHMYVFASPLYQTVWSPPASLRKSSSHTPVFG
SVRDAELDGDGSGGGGSGGGSYHRHVYPPNDDTCSPNANACNAFNSIRDA
DTDDSNQLPGGSRRHVYATNCGESSSSPQVNHHDAVGEFVDGLMDDEQKS
STGGGTGGAAYCDLSDAASFLDH

BO32751.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:15:53
Subject Length Description Subject Range Query Range Score Percent Strand
bin3-PD 1367 CG8276-PD 1..1367 1..1367 7243 100 Plus
bin3-PA 1367 CG8276-PA 1..1367 1..1367 7243 100 Plus
bin3-PB 1367 CG8276-PB 1..1367 1..1367 7243 100 Plus
bin3-PC 1367 CG8276-PC 1..1367 1..1367 7243 100 Plus
CG1239-PC 300 CG1239-PC 168..299 981..1112 399 56.1 Plus