BO32783.complete Sequence
932 bp assembled on 2012-07-12
GenBank Submission: KX797131
> BO32783.complete
GAAGTTATCAGTCGGACATGTCAATGTTAATAAAAAGAGCGTCTGGTTTA
GCTCGACAGTTAGCCCGGCCACTTGTTGCATCACGTAATTTGGCGTCGGC
AGCGCCCTATGGCGATGGAACTGAAGTTCTCGTGGAGCGTTTGGATGGAG
CTCGGCAGGGTATCTCAGTTATTGGCCTAAACCGACCAGCAGCAAAGAAT
TCCTTTAGCCGGGGAATGGTGGAGACCTTCAACGATGTCCTGGAAGATAT
AAAGAAGGATAATGGATCGAGGGTGGTTGTATTGAGGAGTCTGAGCCCTG
GAATCTTCTGTGCCGGAGCGGATTTGAAAGAGCGAAAAGGCATGACTCCC
GAGGAAGCCACCGAATTTGTAAAAGAGCTCAGGGGACTGCTTATTGCCAT
TGAGCAGCTGCCCATGCCGGTAATCGCCGCTGTGGATGGAGCTGCTCTCG
GCGGAGGTCTGGAAATGGCTCTGGCCTGTGACATCCGGACTGCTGCTAGC
GACACGAAGATGGGTCTGGTGGAGACAAGGTTAGCCATCATACCAGGAGC
TGGTGGCACCCAAAGACTGCCCCGCATTCTGTCCCCTGCTCTGGCCAAAG
AACTCATTTTCACGGCACGAGTGTTTAACGGAGCAGAGGCGAAAGATCTG
GGTCTGGTTAACCATGTAGTGAAACAGAACGAAACCCAGGATGCCGCCTA
TCAGCAGGCACTTAAATTGGCAGAGGAAATTCTCCCGAATGGGCCAGTGG
GCGTGCGAATGGCCAAACTGGCCATTGACAAGGGCATGCAGGTGGACCTG
GCCACCGGCTACTCCATCGAAGAGATCTGCTACTCGCAGGTGATACCCAC
TAAGGATCGTTTGGAGGGACTCGCTGCCTTTGCCGAGAAGCGGAAGCCCG
TCTACAAGGGGGAGGCAAGCTTTCTAGACCAT
BO32783.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:43:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8778-RA | 900 | CG8778-PA | 1..897 | 18..914 | 4485 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:43:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8778-RA | 1124 | CG8778-RA | 83..979 | 18..914 | 4485 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:43:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12651446..12652022 | 914..338 | 2885 | 100 | Minus |
2R | 25286936 | 2R | 12652083..12652405 | 340..18 | 1615 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:43:10 has no hits.
BO32783.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-12 11:18:05 Download gff for
BO32783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8778-RA | 77..974 | 17..916 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:42 Download gff for
BO32783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8778-RA | 82..979 | 17..916 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:50:00 Download gff for
BO32783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8778-RA | 82..979 | 17..916 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:50:00 Download gff for
BO32783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12651444..12652020 | 340..916 | 99 | <- | Minus |
2R | 12652084..12652405 | 17..339 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:42 Download gff for
BO32783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8538949..8539525 | 340..916 | 99 | <- | Minus |
arm_2R | 8539589..8539910 | 17..339 | 99 | | Minus |
BO32783.pep Sequence
Translation from 17 to 932
> BO32783.pep
MSMLIKRASGLARQLARPLVASRNLASAAPYGDGTEVLVERLDGARQGIS
VIGLNRPAAKNSFSRGMVETFNDVLEDIKKDNGSRVVVLRSLSPGIFCAG
ADLKERKGMTPEEATEFVKELRGLLIAIEQLPMPVIAAVDGAALGGGLEM
ALACDIRTAASDTKMGLVETRLAIIPGAGGTQRLPRILSPALAKELIFTA
RVFNGAEAKDLGLVNHVVKQNETQDAAYQQALKLAEEILPNGPVGVRMAK
LAIDKGMQVDLATGYSIEEICYSQVIPTKDRLEGLAAFAEKRKPVYKGEA
SFLDH
BO32783.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:08:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8778-PA | 299 | CG8778-PA | 1..299 | 1..299 | 1479 | 100 | Plus |
CG6543-PA | 295 | CG6543-PA | 11..295 | 7..299 | 376 | 34.5 | Plus |
CG6543-PB | 295 | CG6543-PB | 11..295 | 7..299 | 376 | 34.5 | Plus |
Mtpalpha-PB | 744 | CG4389-PB | 20..194 | 48..218 | 271 | 38.3 | Plus |
Mtpalpha-PA | 783 | CG4389-PA | 59..233 | 48..218 | 271 | 38.3 | Plus |