BO32790.complete Sequence
2092 bp assembled on 2012-07-27
GenBank Submission: KX799236
> BO32790.complete
GAAGTTATCAGTCGACATGGCCTCTCAACCGCTTGGACTCCTGCTGGGAG
CCATCCTGTTTTCGATATGCGCAATAGATGCTTCAGTGCCTCATCCTTTG
GCGGCCAACTATTCGATAGACATCCTGCGACTGGCCAAGGCTGCTCACAT
CAAAGCCTATATGGGCGATGAAAAGGAGCAGGCTTGCAATAATTTCTACA
ACTATGCCTGCGCCAATTGGCCTCGTTTGCATCCCGCTCGAAAGTCAAAG
ACGCGGACCAACTACCTGGAGGAACTCCAGGAGCTATATATCCGTAAGAG
CGCAGATATGCTCAAGAGTGCGACCAGAGGAGCTGAGAACAGTGCCGATC
GTCAGTTGAAGTACTTCTATGGATCGTGCCGCCTACAAACAAACGACACG
CGATCCGCCCTGAATACCCTGCAAAATGTGACGGATTTCCGAGGCGGTTG
GCCGGAGATTCGTGTGGCGTCCTGGTATCAGTACGAGTATGATTGGCTGC
AGGTGGTGGCCAATCTGAAACGCAAGCTTGGCGTGGACATCTTCATCGGA
CTGGAGGTGATACTCGACTACAAGGAGGAGAAGATGCATCGCCTGAAGAT
CGGTGCACCACAGTTTCCCATGTCACGGCGTCACTACTTGCATCCCCACT
TCGAAGGAACTCGGGAAATCTACGAGCGTTCGATCGAAAATAAGCTGAAA
TTGTATTTCCCGGAACAATCGGAACACTGGAGGCAGGAGGTGGCCAGTCA
AGTCGTCCAAATAGAGCAGCAACTGGCCAAGGGATTGCCTCACAATCCAG
CCCTCACCTTGGCGCAAACCACTCGTCAAAGGACCGCCGCTGAGATGAAG
ACTGCCTATGGTAGCTATGTAGATGTGACCCGGTATTTGCAATTGATTTT
CAACGACAACTTGTACATGGATTTGTATGAGACACCGGAGGATTACATGT
CAAATCTGGTGGATGTGATAAGGGAAACACCCAAGCTGCAGCTGGCCAAC
TATACCATGTGGAAGGCTTTGGAAGCGTTGGATATCGCCCGAGTGCCCGC
GTCTCAGAGAGCGGATATTTGGTGTGTCCAGCTGGCTCAGCAATTCTTCC
CGCATCAGCTGGAGAGTCTGTTTCATCGCAACTACAACCACATGCAGATG
ATCAATGAGTTGCAATCGACATGGTCGGACATCAAGCGAGTCTTTCGCGA
GGATCTGCAGGCCTCGGAGCGTTTACTTTGGCTTACATTGGAGACCAGGC
AGAAGGCAATCACCAAACTGGAGGCTTTGAAGCTGCACTTCCGGACCCAC
GACGACAACAAATTGATTCGCCAGATGCACGGACTTATTCTGAACATGGA
TCGCTTTTATCCGAACTTGGTCAGTGTTCTCCAGTGGAAGACACAACGCG
GTTTGGCCAAGTTGATGACCGAACCGGTGGCCGAAGATGAAGTACACAAG
CTGCCGCACTACGAGATCCAGAAGAATCGCATCCAAGTGCCAATTACTTT
CCTGCAGGCAAGATTCTTCTGGGATCCCGCCTATCCCAACGGCTTGAAGT
ACGCCACCTTGGGTGTTCTCCTCGCTCGACAAATGCTTCACGGATTTGAT
GGCGTTGGAAGGCGTTACGATGCCTATGGTTACAAGAACAACTGGTGGGA
TCACACCTCGGAGAGTTCATACTCTCGACGTACGCAGTGTTTCCAGGAGC
AGTACGCCATATTTGTGGAATACAAGGGTAAGCCGGTGCAGGATAAGGAT
CTGCTGCGTAGAATTGTAGCCGATAATGGAGCACTGGATATCGCCTATCG
CGCCTACCAACAATGGCTGAAGAATGCTGCCGAAACACCGGTTATATATC
AAAGGGAACGTCTGCCACTCCTGGATCATGACCACAATCAGATTTTCTAT
CTGGGTTATGCGCAGCTGTACTGCACCGATTATCCGGAAACTGTGGAGCG
TTTTGATGAGCTTCCCGAGCAGCTGCGGGTTAACACAGCGCTATCCAATT
CGCAACAGTTCGCCAATGCCTACGGTTGCTCCAGGGAGGAAAAGCTAAAC
GCCCGCTTTAAGTGCACTCTCTACGCAAGCTTTCTAGACCAT
BO32790.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:53:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4721-RA | 2061 | CG4721-PA | 1..2058 | 17..2074 | 10290 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:53:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4721-RA | 2213 | CG4721-RA | 71..2128 | 17..2074 | 10290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:53:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22764045..22766102 | 2074..17 | 10290 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:53:20 has no hits.
BO32790.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-27 18:43:28 Download gff for
BO32790.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4721-RA | 68..2125 | 17..2076 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:21 Download gff for
BO32790.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4721-RA | 68..2125 | 17..2076 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:52:54 Download gff for
BO32790.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4721-RA | 71..2128 | 17..2076 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:52:54 Download gff for
BO32790.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22764042..22766102 | 17..2076 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:21 Download gff for
BO32790.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18589764..18591824 | 17..2076 | 99 | | Minus |
BO32790.pep Sequence
Translation from 16 to 2092
> BO32790.pep
MASQPLGLLLGAILFSICAIDASVPHPLAANYSIDILRLAKAAHIKAYMG
DEKEQACNNFYNYACANWPRLHPARKSKTRTNYLEELQELYIRKSADMLK
SATRGAENSADRQLKYFYGSCRLQTNDTRSALNTLQNVTDFRGGWPEIRV
ASWYQYEYDWLQVVANLKRKLGVDIFIGLEVILDYKEEKMHRLKIGAPQF
PMSRRHYLHPHFEGTREIYERSIENKLKLYFPEQSEHWRQEVASQVVQIE
QQLAKGLPHNPALTLAQTTRQRTAAEMKTAYGSYVDVTRYLQLIFNDNLY
MDLYETPEDYMSNLVDVIRETPKLQLANYTMWKALEALDIARVPASQRAD
IWCVQLAQQFFPHQLESLFHRNYNHMQMINELQSTWSDIKRVFREDLQAS
ERLLWLTLETRQKAITKLEALKLHFRTHDDNKLIRQMHGLILNMDRFYPN
LVSVLQWKTQRGLAKLMTEPVAEDEVHKLPHYEIQKNRIQVPITFLQARF
FWDPAYPNGLKYATLGVLLARQMLHGFDGVGRRYDAYGYKNNWWDHTSES
SYSRRTQCFQEQYAIFVEYKGKPVQDKDLLRRIVADNGALDIAYRAYQQW
LKNAAETPVIYQRERLPLLDHDHNQIFYLGYAQLYCTDYPETVERFDELP
EQLRVNTALSNSQQFANAYGCSREEKLNARFKCTLYASFLDH
BO32790.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:16:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4721-PA | 686 | CG4721-PA | 1..686 | 1..686 | 3641 | 100 | Plus |
| CG14526-PC | 707 | CG14526-PC | 42..707 | 32..686 | 829 | 29 | Plus |
| CG14528-PA | 682 | CG14528-PA | 33..682 | 28..686 | 819 | 30.3 | Plus |
| CG14527-PA | 700 | CG14527-PA | 10..700 | 1..686 | 796 | 29.1 | Plus |
| CG14529-PA | 681 | CG14529-PA | 21..681 | 19..686 | 625 | 25.7 | Plus |
