BO32792.complete Sequence
3055 bp assembled on 2012-07-30
GenBank Submission: KX796652
> BO32792.complete
GAAGTTATCAGTCGACATGGACGATCCTCTTAAGCCCAAGCCAGTTCCAC
TGGCTGCCGAAACGGTACTGTGGTTCGAGTTCCTGCTCGATCCGCACAAG
ATTACGCAGCATCTGCAGCGCCCGCATCCCGAGCCCAGCGCCATGGAGCT
GATCGTGCAGTTCATCAGCATGACGCCGAACACGGCGCAGGAGTCAGTGG
GGACGCCTGGCAGTGATTTGCAGAATCTAAACCAGACGCCATCGAATTCG
GGACCCATTCCCGGCGTGGTTGGTGGTGCCCCTGCGCCGACAACGCCCAC
TGCCTCCGGCGGAGTGGGCATGCCCCATAGCCCACAAAGGCCCGCGGAGA
AGGGCCTGCAATTGAACCGCAAGCAGTTGGCACTGAAAATCCTCGAGCTG
AAGGTAGCCACTTGGCTGAAGTGGGATCTGGATGCATTGGAGAAGAACCT
GCCTGTGATTATGCAGCTGGCCTTGCTGCGCGATCTGTGCACCATAAGCT
ACGGCTGCTCCTTAAGTATTCCCCTGCCCAATGATTTTGACGCGAGAATT
TCCGCTGCTGGAAACGAAAGAGCAGCAAGATTCGCCTTGACCATATACCA
CCGCATGCTGCTGCGAATGCAACTGATAAAGGAGCAGGCGTTAAAAGCGC
CACGTCCTCAAAACACAATGTACCAAACTGTGGACCAGCTCCAGCAGTTT
CTGGACACACCGACTCAACCATCCATCGAGTATTTGCAACAACTCTGCGC
CTCGACAAAACCTTTCTACATATTTCACTACGACAGCTTTGTTCCGCTGC
GATGTGATGATATCGGCAATGGCCAAAACTACGATGTTATGCACCTAATA
ACACCCCAGGAATTGAGAGCCCAACTGCACTACGAGCTCGCCCAATATTA
CCTGTACACCAAACAGTATGTTTTGGCCCGGGAAGCGGCCGCCGCGTGTA
ATACTAATCTGCAGGCAATCCCGCCACAGACAACTCTATATTACTGCCAC
ATACGACCGTCAGAACTGGAAGGTCTACTGCAGGCCTGTGGAATTAGCGC
CGAGGAGCAGTCACTGCTGGAGAAGTTCCAGCAATCGCTACTTAACAACT
ACACAGACATTGTATCAATTCTGCGAATGGACAACAGAAGGCGAGAAATC
CCCTTTATAAGCCGGCGGCAAGTGGAACTGGACATTGAGGGTTCCATCTC
CACGGGCATACTCAAGGAGACAGTTCAGCTGCAATTGCAGGTGGCTGCAT
TGAATGTGGTGCGAAACATCTTTGAGTGGGGCAGCATCTTTGGCAGCGTT
GAGTACTTTGAGAAGTACCGGGAACTGGACTGCCTGCCACCGCTGGTGGA
GGCTTTGCAGGAAATGCTTCCCCACTGTACTTTCAAAGAACAGGCGGCAC
TCAAGCACTTCCTCATCGACTGTTTGCTTCATCAGGGTGGGCAGTCACGA
CAGTTGCTACAAACGGTGCGAGGATTTGGACTGTTCTCGTCAGATGAACT
CCAGGATATTGACGAACAGATGCTGCAGGCGACGCCGCCGGTGCCCACCA
ACTCGTTGGCCTCGCTTTCCGACTGGATGTGTCACTCCAAGATGAGCAGG
GTTGACGTGGGCGCTCTGGAGCGACAACTGATAAGCTGCACCAATGCCAA
CACAGTGAGGATATTGCTAGTGAAATTATGCGCAACTGCTCCTGGAAAAC
CTCTGTGGGCCATTAATCCCAGTTGGGACGTACCACAGCCCCTGAAAACT
CTTATTATGGCCATGCCGGTTAGCTTTTTGCAAGACTTCAGCTATGTTCT
GCTCGGCAAGGCGCGAGAATTGGCCACAAGGGGCAACTACATCGATGCCG
TTTCAATGCTGAGTGTACTGAAGTCGGAAAATCAGCGCCAGGAGATGGCG
GCCAATGTGCAGCTGATGTGTAAGCTGATCACCTGGGAAATCCTGCACAT
TCAGATAACACAGTGCCTGGAGGAGTGGCACCAGAAGCCACTCGATCTGC
AATCCTTGGGAGGAAGATGCAAGCAATGTTTGGGAGCCCTGCAGGCAGGA
GATTCAATCGTCCCACGTCCGGATATCCTAGAGAGTTGCGCTATCATGCT
ACTTAACCTCACAGAATTTCCACCTCTCCTTTACCTGGATAAACGGGCGG
GTCCCCTGGAACTACCCCTGGCCTTCGCCGCCACCTTCATCGAGATGGAG
AAGATGAAGGGCCCCAAGAAGGTATGTCGCGATGCCTGGGAACTGATGCT
AAGCATGTTCCTTAACGTTCCGAAGCGTGGCTCCTCAGGAGTTGGCGGTA
TCAGTTCCCTGCAGGCCTTCCTACAGCGAATCCGCCACCAAAGCGTTTTC
GGACTCGCCATCTCCATGATAGGCAAAGTCCACAACATACTTAAGGATGA
CCCCAATCATGATTTAAGCTGCGAGTACATGCAGCTGTGGCCTACCAGCA
TTAACAACCCTGTCAGCTACAGTTTGAGGAGCGTTTGCGAGACCCTGCAA
TGGCTTCTTTCCGAGGCTTTGTCCTACTATCCGCAAACCATTTCATGGCT
GAAGATGAAAGGCGATCTAGATCTAGCCATCGGCAATAATGAGTCCGCAA
TGCGTTGCTATGTAAATGCGCTGGTTACTGGCACCGACTACTGCACCATG
CCGCTGCAGAGAAATGTGGCCGACGACTACGTGATCCGCAAGATGATTCG
ATGTGCCGCCAATCTGGGCTGTCACATGCAGGCCACCGTTCTGTGTCAGT
TCCTTGATGAGATCGACTACGGCATTGTGTTCAAGAATCTCAGCGAGAAA
TCGTCGAATTTCACCGATGCCATGGATGCATATTACAGCTGCATCTGGGA
TACAACTCTGCTGGAGTTCATCGTCAATCTGCACGCTAAGCGAGGCGAAC
ACAGTCGGAAACTTGAAGCGATTTCTATGATGGGCACTCTGGAGCTGAAT
GCAAACAACAATGAGGAGATCAAACGAGAATCTGCCATGGTGCGGAAATC
GAGATTTCTGCGTGCCCTGGCCAAGCAGTATTTGCTGGCAAGCTTTCTAG
ACCAT
BO32792.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:53:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IntS8-RA | 3024 | CG5859-PA | 1..3021 | 17..3037 | 15105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:53:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IntS8-RA | 3293 | CG5859-RA | 93..3114 | 16..3037 | 15110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:53:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16851364..16852286 | 670..1592 | 4615 | 100 | Plus |
| 2R | 25286936 | 2R | 16852352..16853216 | 1593..2457 | 4325 | 100 | Plus |
| 2R | 25286936 | 2R | 16853278..16853740 | 2458..2920 | 2315 | 100 | Plus |
| 2R | 25286936 | 2R | 16850712..16851132 | 131..551 | 2105 | 100 | Plus |
| 2R | 25286936 | 2R | 16851191..16851311 | 552..672 | 605 | 100 | Plus |
| 2R | 25286936 | 2R | 16853808..16853925 | 2920..3037 | 590 | 100 | Plus |
| 2R | 25286936 | 2R | 16850529..16850644 | 16..131 | 580 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 11:53:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dtei\I-element | 5386 | Dtei\I-element DTEII 5386bp | 311..368 | 2400..2344 | 125 | 70.7 | Minus |
BO32792.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-30 09:39:42 Download gff for
BO32792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5859-RA | 73..3093 | 17..3039 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:25 Download gff for
BO32792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS8-RA | 94..3114 | 17..3039 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:52:57 Download gff for
BO32792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS8-RA | 94..3114 | 17..3039 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:52:57 Download gff for
BO32792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16850530..16850644 | 17..131 | 100 | -> | Plus |
| 2R | 16850713..16851132 | 132..551 | 100 | -> | Plus |
| 2R | 16851191..16851308 | 552..669 | 100 | -> | Plus |
| 2R | 16851364..16852286 | 670..1592 | 100 | -> | Plus |
| 2R | 16852352..16853216 | 1593..2457 | 100 | -> | Plus |
| 2R | 16853278..16853740 | 2458..2920 | 100 | -> | Plus |
| 2R | 16853809..16853925 | 2921..3039 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:25 Download gff for
BO32792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12738035..12738149 | 17..131 | 100 | -> | Plus |
| arm_2R | 12738218..12738637 | 132..551 | 100 | -> | Plus |
| arm_2R | 12738696..12738813 | 552..669 | 100 | -> | Plus |
| arm_2R | 12738869..12739791 | 670..1592 | 100 | -> | Plus |
| arm_2R | 12739857..12740721 | 1593..2457 | 100 | -> | Plus |
| arm_2R | 12740783..12741245 | 2458..2920 | 100 | -> | Plus |
| arm_2R | 12741314..12741430 | 2921..3039 | 98 | | Plus |
BO32792.pep Sequence
Translation from 16 to 3055
> BO32792.pep
MDDPLKPKPVPLAAETVLWFEFLLDPHKITQHLQRPHPEPSAMELIVQFI
SMTPNTAQESVGTPGSDLQNLNQTPSNSGPIPGVVGGAPAPTTPTASGGV
GMPHSPQRPAEKGLQLNRKQLALKILELKVATWLKWDLDALEKNLPVIMQ
LALLRDLCTISYGCSLSIPLPNDFDARISAAGNERAARFALTIYHRMLLR
MQLIKEQALKAPRPQNTMYQTVDQLQQFLDTPTQPSIEYLQQLCASTKPF
YIFHYDSFVPLRCDDIGNGQNYDVMHLITPQELRAQLHYELAQYYLYTKQ
YVLAREAAAACNTNLQAIPPQTTLYYCHIRPSELEGLLQACGISAEEQSL
LEKFQQSLLNNYTDIVSILRMDNRRREIPFISRRQVELDIEGSISTGILK
ETVQLQLQVAALNVVRNIFEWGSIFGSVEYFEKYRELDCLPPLVEALQEM
LPHCTFKEQAALKHFLIDCLLHQGGQSRQLLQTVRGFGLFSSDELQDIDE
QMLQATPPVPTNSLASLSDWMCHSKMSRVDVGALERQLISCTNANTVRIL
LVKLCATAPGKPLWAINPSWDVPQPLKTLIMAMPVSFLQDFSYVLLGKAR
ELATRGNYIDAVSMLSVLKSENQRQEMAANVQLMCKLITWEILHIQITQC
LEEWHQKPLDLQSLGGRCKQCLGALQAGDSIVPRPDILESCAIMLLNLTE
FPPLLYLDKRAGPLELPLAFAATFIEMEKMKGPKKVCRDAWELMLSMFLN
VPKRGSSGVGGISSLQAFLQRIRHQSVFGLAISMIGKVHNILKDDPNHDL
SCEYMQLWPTSINNPVSYSLRSVCETLQWLLSEALSYYPQTISWLKMKGD
LDLAIGNNESAMRCYVNALVTGTDYCTMPLQRNVADDYVIRKMIRCAANL
GCHMQATVLCQFLDEIDYGIVFKNLSEKSSNFTDAMDAYYSCIWDTTLLE
FIVNLHAKRGEHSRKLEAISMMGTLELNANNNEEIKRESAMVRKSRFLRA
LAKQYLLASFLDH
BO32792.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:16:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IntS8-PA | 1007 | CG5859-PA | 1..1007 | 1..1007 | 5250 | 100 | Plus |
