BO32795.complete Sequence
3832 bp assembled on 2012-09-12
GenBank Submission: KX799160
> BO32795.complete
GAAGTTATCAGTCGACATGGATCAATTTCAAACTTCACTAAATCCGCGGA
AACTCGAGCTTCTGGAGTCTCGAATTACTGGAGTGCGGATGTCCCCCGGC
GCCCATTTGCAGATGTCCCCGCAGAACACTTCGTCCCTAAGTCAACACCA
TCCACATCAACAGCAACAGTTACAACCCCCACAGCAGCAACAACAGCATT
TCCCTAACCATCACAGCGCCCAGCAACAGTCGCAGCAGCAGCAGCAACAG
GAGCAACAGAATCCCCAGCAGCAGGCGCAACAGCAGCAGCAGATACTCCC
ACATCAACATTTGCAGCACCTGCACAAGCATCCGCATCAGCTGCAACTGC
ATCAGCAGCAGCAACAACAACTCCACCAGCAACAGCAGCAACACTTCCAC
CAGCAGTCGCTGCAAGGGCTGCATCAGGGTAGCAGCAATCCGGATTCGAA
TATGAGCACTGGCTCCTCGCATAGCGAGAAGGATGTCAATGATATGCTGA
GTGGCGGTGCAGCAACGCCAGGAGCTGCAGCAGCAGCGATTCAACAGCAA
CATCCCGCCTTTGCGCCCACACTGGGAATGCAGCAACCACCGCCGCCCCC
ACCTCAACACTCCAATAATGGAGGCGAGATGGGCTACTTGTCGGCAGGCA
CGACCACGACGACGTCGGTGTTAACGGTAGGCAAGCCTCGGACGCCAGCG
GAGCGGAAACGGAAGCGAAAAATGCCTCCATGTGCCACTAGTGCGGATGA
GGCGGGGAGTGGCGGTGGCTCTGGCGGAGCAGGAGCAACCGTTGTTAACA
ACAGCAGCCTGAAGGGCAAATCATTGGCCTTTCGTGATATGCCCAAGGTA
AACATGAGCCTGAATCTGGGCGATCGTCTGGGAGGATCTGCAGGAAGCGG
AGTAGGAGCCGGTGGCGCCGGAAGCGGGGGAGGTGGCGCTGGTTCCGGTT
CTGGAAGCGGTGGCGGCAAAAGCGCCCGCCTGATGCTGCCAGTCAGCGAC
AACAAGAAGATCAACGACTATTTCAATAAGCAGCAAACGGGCGTGGGCGT
CGGTGTGCCAGGTGGTGCGGGAGGCAATACCGCTGGCCTTCGAGGATCAC
ATACGGGAGGTGGCAGCAAGTCACCCTCATCCGCCCAGCAGCAGCAAACG
GCGGCACAGCAGCAGGGAAGCGGTGTTGCGACGGGAGGCAGTGCAGGCGG
TTCCGCTGGCAACCAGGTGCAAGTGCAAACGAGCAGCGCTTACGCCCTTT
ACCCACCAGCTAGTCCCCAAACCCAGACGTCACAGCAACAGCAGCAGCAG
CAACCGGGATCAGACTTTCACTATGTCAACTCCAGCAAGGCGCAGCAACA
ACAGCAGCGTCAACAGCAACAGACTTCCAATCAAATGGTTCCTCCACACG
TGGTCGTTGGCCTTGGTGGTCATCCACTGAGCCTCGCGTCCATTCAGCAG
CAGACGCCCTTATCCCAGCAGCAACAGCAGCAACAACAGCAGCAGCAACA
GCAGCAACTGGGACCACCGACCACATCGACGGCCTCCGTCGTGCCAACGC
ATCCGCATCAACTCGGATCCCTGGGAGTTGTTGGGATGGTCGGTGTGGGT
GTTGGCGTGGGCGTTGGAGTAAATGTGGGTGTGGGACCACCACTGCCACC
ACCACCGCCGATGGCCATGCCAGCGGCCATTATCACTTATAGTAAGGCCA
CTCAAACGGAGGTGTCGCTGCATGAATTGCAGGAGCGCGAAGCGGAGCAC
GAATCGGGCAAGGTGAAGCTAGACGAGATGACACGGCTGTCCGATGAACA
AAAGTCCCAAATTGTTGGCAACCAGAAGACGATTGACCAGCACAAGTGCC
ACATAGCCAAGTGTATTGATGTGGTCAAGAAGCTGTTGAAGGAGAAGAGC
AGCATCGAGAAGAAGGAGGCGCGACAGAAGTGCATGCAGAATCGCCTCAG
GCTCGGACAGTTTGTTACCCAACGAGTGGGCGCCACATTCCAGGAGAACT
GGACGGACGGCTATGCGTTCCAGGAGCTGAGTCGGCGGCAAGAAGAAATA
ACCGCTGAGCGTGAAGAGATAGATCGGCAGAAAAAGCAGCTGATGAAAAA
GCGTCCGGCGGAGTCCGGACGCAAGCGCAACAACAACAGTAACCAGAACA
ACCAGCAGCAGCAGCAACAGCAACACCAGCAACAGCAGCAGCAACAAAAT
TCCAACTCGAACGATTCCACGCAGCTGACGAGCGGAGTTGTTACCGGTCC
AGGCAGTGATCGTGTGAGCGTAAGCGTCGACAGCGGATTGGGTGGCAATA
ATGCGGGCGCGATCGGTGGCGGAACCGTTGGTGGTGGCGTTGGAGGTGGT
GGTGTTGGAGGCGGTGGTGTCGGAGGCGGCGGTGGACGTGGACTTTCTCG
CAGCAATTCGACGCAGGCCAATCAGGCTCAATTGCTGCACAACGGCGGTG
GTGGTTCGGGCGGCAATGTCGGCAACTCGGGCGGCGTTGGCGACCGCTTG
TCAGATCGAGGAGGAGGAGGTGGCGGCATCGGCGGAAACGATAGCGGCAG
CTGCTCGGACTCGGGCACTTTCCTGAAGCCAGACCCCGTATCGGGTGCCT
ACACAGCGCAGGAGTATTACGAGTACGATGAGATCCTCAAGTTGCGACAA
AATGCCCTCAAAAAGGAGGACGCCGACCTGCAGCTGGAGATGGAGAAGCT
GGAGCGGGAGCGCAATCTGCACATCCGAGAGCTCAAGCGGATTCTTAACG
AGGATCAGTCCCGCTTTAACAATCATCCCGTGCTGAATGATCGCTATCTT
CTGTTGATGCTCCTGGGCAAGGGCGGCTTCTCAGAGGTCCACAAGGCCTT
CGACCTGAAGGAGCAACGCTATGTCGCATGTAAGGTGCACCAATTAAACA
AGGATTGGAAGGAGGATAAGAAAGCTAATTATATCAAACACGCTTTGCGG
GAATACAACATTCACAAGGCACTGGATCATCCGCGGGTCGTCAAGCTATA
CGATGTCTTCGAGATCGATGCGAATTCCTTTTGCACAGTGCTCGAATACT
GTGATGGCCACGATCTGGACTTCTATTTGAAGCAACATAAGACTATACCC
GAGCGTGAAGCGCGCTCGATAATAATGCAGGTTGTATCTGCACTCAAGTA
TCTAAATGAGATTAAGCCTCCAGTTATCCACTACGATCTGAAGCCCGGCA
ACATTCTGCTTACCGAGGGCAACGTCTGCGGCGAGATTAAGATCACCGAC
TTCGGTCTGTCAAAGGTGATGGACGACGAGAATTACAATCCCGATCACGG
CATGGATCTGACCTCTCAGGGGGCGGGAACCTACTGGTATCTGCCACCCG
AGTGCTTTGTCGTGGGCAAAAATCCGCCGAAAATCTCCTCCAAAGTGGAC
GTATGGAGTGTGGGTGTTATCTTCTACCAGTGTCTGTACGGCAAAAAGCC
CTTCGGTCACAATCAGTCGCAGGCCACGATTCTCGAGGAGAATACGATCC
TGAAGGCCACCGAAGTGCAGTTCTCCAACAAGCCAACCGTTTCTAACGAG
GCCAAGAGTTTCATTCGGGGATGCTTGGCCTATCGCAAGGAGGATCGCAT
GGATGTGTTCGCACTGGCCAGGCACGAGTACATTCAGCCACCGATACCGA
AACATGGGCGCGGTTCGCTCAATCAGCAACAGCAGGCGCAACAACAGCAG
CAGCAACAACAGCAACAGCAGCAGCAACAGTCGTCGACGTCACAGGCCAA
TTCTACAGGCCAGACATCTTTCTCTGCCCACATGTTTGGCAATATGAATC
AGTCGAGTTCGTCCGCAAGCTTTCTAGACCAT
BO32795.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:07:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tlk-RJ | 3801 | CG34412-PJ | 1..3798 | 17..3814 | 18990 | 100 | Plus |
| tlk-RH | 3801 | CG34412-PH | 1..3798 | 17..3814 | 18990 | 100 | Plus |
| tlk-RF | 3801 | CG34412-PF | 1..3798 | 17..3814 | 18990 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:07:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tlk-RJ | 4882 | CG34412-RJ | 517..4314 | 17..3814 | 18990 | 100 | Plus |
| tlk-RH | 5890 | CG34412-RH | 517..4314 | 17..3814 | 18990 | 100 | Plus |
| tlk-RF | 6513 | CG34412-RF | 299..4096 | 17..3814 | 18990 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:06:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3781654..3783560 | 88..1994 | 9535 | 100 | Plus |
| X | 23542271 | X | 3783674..3784441 | 1991..2758 | 3840 | 100 | Plus |
| X | 23542271 | X | 3786142..3786401 | 3555..3814 | 1300 | 100 | Plus |
| X | 23542271 | X | 3785593..3785813 | 3336..3556 | 1105 | 100 | Plus |
| X | 23542271 | X | 3785287..3785497 | 3128..3338 | 1055 | 100 | Plus |
| X | 23542271 | X | 3785028..3785226 | 2934..3132 | 980 | 99.5 | Plus |
| X | 23542271 | X | 3784524..3784706 | 2755..2937 | 915 | 100 | Plus |
| X | 23542271 | X | 3721576..3721647 | 17..88 | 360 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 13:07:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2316..2545 | 143..372 | 465 | 68 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2576..2988 | 138..554 | 390 | 58.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6951 | 143..369 | 387 | 66.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..7016 | 143..404 | 375 | 63 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2364..2781 | 143..554 | 367 | 59.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6791..7200 | 143..552 | 306 | 59.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2547..2857 | 1244..1563 | 290 | 59.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..6967 | 1327..1567 | 230 | 60.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..7028 | 1212..1508 | 226 | 59.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6869..7112 | 143..392 | 218 | 59.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6725..6817 | 1283..1372 | 205 | 72 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2532 | 1285..1527 | 202 | 59.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2339..2549 | 1282..1494 | 194 | 59 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6932 | 1288..1514 | 187 | 59 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2319..2538 | 1283..1508 | 178 | 57 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2403..2664 | 1283..1530 | 176 | 56.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6775..7041 | 1282..1547 | 168 | 59 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2787..2999 | 1283..1501 | 161 | 58.5 | Plus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7127..7396 | 1264..1529 | 154 | 54.9 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 8561..8831 | 1246..1512 | 150 | 54.7 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1061..1146 | 1283..1371 | 149 | 69.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6749..6828 | 1283..1371 | 144 | 69.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2454..2496 | 1466..1508 | 143 | 81.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1502..1546 | 1327..1371 | 135 | 77.8 | Plus |
BO32795.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-12 16:03:24 Download gff for
BO32795.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tlk-RJ | 268..4065 | 17..3816 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:51:03 Download gff for
BO32795.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tlk-RF | 299..4096 | 17..3816 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:21:31 Download gff for
BO32795.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tlk-RF | 299..4096 | 17..3816 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:21:31 Download gff for
BO32795.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3721576..3721647 | 17..88 | 100 | -> | Plus |
| X | 3781655..3783559 | 89..1993 | 100 | -> | Plus |
| X | 3783677..3784441 | 1994..2758 | 100 | -> | Plus |
| X | 3784528..3784706 | 2759..2937 | 100 | -> | Plus |
| X | 3785032..3785224 | 2938..3130 | 100 | -> | Plus |
| X | 3785290..3785495 | 3131..3336 | 100 | -> | Plus |
| X | 3785594..3785813 | 3337..3556 | 100 | -> | Plus |
| X | 3786144..3786401 | 3557..3816 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:51:03 Download gff for
BO32795.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3615609..3615680 | 17..88 | 100 | -> | Plus |
| arm_X | 3675688..3677592 | 89..1993 | 100 | -> | Plus |
| arm_X | 3677710..3678474 | 1994..2758 | 100 | -> | Plus |
| arm_X | 3678561..3678739 | 2759..2937 | 100 | -> | Plus |
| arm_X | 3679065..3679257 | 2938..3130 | 100 | -> | Plus |
| arm_X | 3679323..3679528 | 3131..3336 | 100 | -> | Plus |
| arm_X | 3679627..3679846 | 3337..3556 | 100 | -> | Plus |
| arm_X | 3680177..3680434 | 3557..3816 | 99 | | Plus |
BO32795.pep Sequence
Translation from 16 to 3832
> BO32795.pep
MDQFQTSLNPRKLELLESRITGVRMSPGAHLQMSPQNTSSLSQHHPHQQQ
QLQPPQQQQQHFPNHHSAQQQSQQQQQQEQQNPQQQAQQQQQILPHQHLQ
HLHKHPHQLQLHQQQQQQLHQQQQQHFHQQSLQGLHQGSSNPDSNMSTGS
SHSEKDVNDMLSGGAATPGAAAAAIQQQHPAFAPTLGMQQPPPPPPQHSN
NGGEMGYLSAGTTTTTSVLTVGKPRTPAERKRKRKMPPCATSADEAGSGG
GSGGAGATVVNNSSLKGKSLAFRDMPKVNMSLNLGDRLGGSAGSGVGAGG
AGSGGGGAGSGSGSGGGKSARLMLPVSDNKKINDYFNKQQTGVGVGVPGG
AGGNTAGLRGSHTGGGSKSPSSAQQQQTAAQQQGSGVATGGSAGGSAGNQ
VQVQTSSAYALYPPASPQTQTSQQQQQQQPGSDFHYVNSSKAQQQQQRQQ
QQTSNQMVPPHVVVGLGGHPLSLASIQQQTPLSQQQQQQQQQQQQQQLGP
PTTSTASVVPTHPHQLGSLGVVGMVGVGVGVGVGVNVGVGPPLPPPPPMA
MPAAIITYSKATQTEVSLHELQEREAEHESGKVKLDEMTRLSDEQKSQIV
GNQKTIDQHKCHIAKCIDVVKKLLKEKSSIEKKEARQKCMQNRLRLGQFV
TQRVGATFQENWTDGYAFQELSRRQEEITAEREEIDRQKKQLMKKRPAES
GRKRNNNSNQNNQQQQQQQHQQQQQQQNSNSNDSTQLTSGVVTGPGSDRV
SVSVDSGLGGNNAGAIGGGTVGGGVGGGGVGGGGVGGGGGRGLSRSNSTQ
ANQAQLLHNGGGGSGGNVGNSGGVGDRLSDRGGGGGGIGGNDSGSCSDSG
TFLKPDPVSGAYTAQEYYEYDEILKLRQNALKKEDADLQLEMEKLERERN
LHIRELKRILNEDQSRFNNHPVLNDRYLLLMLLGKGGFSEVHKAFDLKEQ
RYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEI
DANSFCTVLEYCDGHDLDFYLKQHKTIPEREARSIIMQVVSALKYLNEIK
PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDDENYNPDHGMDLTS
QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ
SQATILEENTILKATEVQFSNKPTVSNEAKSFIRGCLAYRKEDRMDVFAL
ARHEYIQPPIPKHGRGSLNQQQQAQQQQQQQQQQQQQQSSTSQANSTGQT
SFSAHMFGNMNQSSSSASFLDH
BO32795.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:33:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tlk-PJ | 1266 | CG34412-PJ | 1..1266 | 1..1266 | 6635 | 100 | Plus |
| tlk-PH | 1266 | CG34412-PH | 1..1266 | 1..1266 | 6635 | 100 | Plus |
| tlk-PF | 1266 | CG34412-PF | 1..1266 | 1..1266 | 6635 | 100 | Plus |
| tlk-PE | 1255 | CG34412-PE | 6..1255 | 17..1266 | 6521 | 99.4 | Plus |
| tlk-PK | 1265 | CG34412-PK | 19..1265 | 20..1266 | 6521 | 99.7 | Plus |
