BO32838.complete Sequence
2347 bp assembled on 2012-07-30
GenBank Submission: KX797888
> BO32838.complete
GAAGTTATCAGTCGACATGGGCAAGAAGAAGGACAAGTCCGGGAAGCTGG
ACAAGCAGACGACGAAGAAGGAGGCACCGAGCTCGTCGCAGGCCAACATG
GGGAAGGCAGCTGGAGCCAATGATTCGGAGAACGGAATTTGGCAGGACTC
TCGGTTCCAGCACCTGCTGACCGATCCCCGATTTCGCGGCGTTCCAAAAG
TGCAGCGAAAGGTCAAGATCGACAAGCGTTTCCAGGGCATGTTCACGGAC
GACAAGTTCAAGGTGAAGTACACCGTGGACAAGTACGGCCGCCCGGTCAA
CAAGAGCAACGCCGAGGACCTCAGAAAGTTCTACGAACTGGACGAGAACG
AGAGCAGCAGCGGCGAGGAGCCTGCCAAAAAGGAATCCGATCTTGACTCC
GAGGCGGAGGCAGAGCAACAAGAGCGGCGCGCCGAGGAGCGAGCCATAGC
CAACTTGGAGAAGGAGGAGAGCAACGATACTCTGGAAAGCGATAGTTCCG
AGGTGTCACAGAGTCTTCGTCAGCGCCTGACCAACCCAGAGATAGACTAC
GCCCGCGGAGAAGGCCGCCTGTATACCGACTCCTCCTCAGACGAGGACAG
CGATGATGAGGACGAGGGTCCAGAACTGCAGATAGACCACGTGTGGGGCG
AACTGGACAACGATGCCGAGCACACCGAGGAGAGCACCCGCCGGCTGGCT
GTTTGCAACATGGACTGGGACCGCATCCGGGCCGAGGATCTAATGGTCAT
GCTCAGCTCCTTCCTGCCGCCCGGCGGTAGCATTCTCAGCGTCAAGATAT
ACCCCTCAGAGTTCGGGAAAGCGCGCATGGCCGAGGAGGAAGTGCACGGC
CCAAAGGAACTGGTGGAGCGCGTGGAGCCAGAAGACGACTCCGATGAGGA
GCTCGTACGCCAGCAGGACAGCGATGCCGAAGAGGGGGAGGACTACCACA
TGGAGAAGCTGCGTCAGTACCAGCTAAACCGACTTCGCTACTACTATGCT
GTTGTCGAGTGCGACAGCATAGACACGGCCGACAAGGTATACAAGGAGTG
CGATGGTATCGAGTACGAGAGCTCCGCCACGCGCGTGGACTTGCGCTTCA
TCCCGGACGACACCTCGTTCGAGGAGGACACGCCGTCGGACGAATGCTTC
GAGCTGCCGGATGCCAGCAGCTATAAGCCGCGACAGTTCACCACCACGGC
GTTGCAGCAGGCCAAGGTGGATCTAACCTGGGACGAGACGGCGCTGGACC
GTCGTGAGCTGGGTGACAAGCTCTCCAGCGGGCAGGTTGACAAGCTCACG
GACAAGGAGCTGCGCCAGATAGTAGCGTACAGTAGTGAGGAAGAGGATTC
TGAGGCAGAGGAATCCCCGGCGGAGGAGGCTGCTCAAAAGGCGGTTTCAG
AGGACCCACAGAAGAGCAAGCCCAAAAAGACTTCTAAGCAGGAACGCATT
GCCACCTACAAAAACTTGCTGGCCGACATCCTGGAGCAGGAAAAGAAGGA
GAAGGAGCAGAAGTACGAAATGGAAATGACCTGGAACGTGGAGCCCCAGC
ACGAAGAGGCACAGCCGGAGCAGCAAGCCCAGGCCGAGCTCACGCCCATC
GAGAAGGTGATCCAGAAACGCAGCGAGAAGAACAGGCAGCGCAAGGAACA
GCGCCGCCAGCGCCAGATCGAAGCCAGAGGAGGCGATGCCGGTGAGGACA
GCGATGAGTCCATGGTGCCCGATGGCATCGATTTGAATGACGCCTATTTC
GCCGAGGAGTTCGCTAATGGAGACTACGCTCCCCCTAAAACGAAGCAGGA
CAAGAAGAAAAAGAAAAAGAAGGGAAAGGACGATGGAGAGGAGGACGTCG
AGGCGAAGCGGCAAGAGAAGGAGCTTGAGCTACTGCTGGACGATGGCGAC
GGGCGCGACGAGAAGCAACACTTCAGTCTGACCAAAATCCTCAAGAAGGA
GGAGCAAGAAGCGAGCGGTTCAAAGCGAAAGCGTCGTCAGAAGTTAAAGA
AATCGAAAAATCAGCCGCAGAATGCGGAGAAGCTGGACGACGACTTCCAG
GTAAACCTGAATGATAATCGCTTCAGTGCCGTTTACAAGTCGCACGAGTA
CAACATCGATCCCACCCACTCCCATTACAAGCCCACCAAGGGCATGCAGC
AGATCATCGGCGAGAAGTTAAAGCGCAGAAAGGAGCAGGGGGAGGGCGGC
GCTGCAAACGGCGATGCGGATGGGGATGAGCAGGTAGCCCCCAAGAGGAG
TAAGCAGCAGCTGGAGCAGAACGCCCTGGTAAAGAGTCTGAAGCGTAAGA
TCCAGCTGCAGCAGCAGGGCCAGAAGCTTGCAAGCTTTCTAGACCAT
BO32838.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:53:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11417-RA | 2316 | CG11417-PA | 1..2313 | 17..2329 | 11550 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:53:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11417-RA | 2460 | CG11417-RA | 82..2394 | 17..2329 | 11550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:53:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1354095..1356407 | 17..2329 | 11550 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:53:42 has no hits.
BO32838.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-30 09:39:44 Download gff for
BO32838.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11417-RA | 53..2365 | 17..2331 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:29 Download gff for
BO32838.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11417-RA | 82..2394 | 17..2331 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:53:01 Download gff for
BO32838.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11417-RA | 82..2394 | 17..2331 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:53:01 Download gff for
BO32838.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1354095..1356407 | 17..2331 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:29 Download gff for
BO32838.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1248128..1250440 | 17..2331 | 99 | | Plus |
BO32838.pep Sequence
Translation from 16 to 2347
> BO32838.pep
MGKKKDKSGKLDKQTTKKEAPSSSQANMGKAAGANDSENGIWQDSRFQHL
LTDPRFRGVPKVQRKVKIDKRFQGMFTDDKFKVKYTVDKYGRPVNKSNAE
DLRKFYELDENESSSGEEPAKKESDLDSEAEAEQQERRAEERAIANLEKE
ESNDTLESDSSEVSQSLRQRLTNPEIDYARGEGRLYTDSSSDEDSDDEDE
GPELQIDHVWGELDNDAEHTEESTRRLAVCNMDWDRIRAEDLMVMLSSFL
PPGGSILSVKIYPSEFGKARMAEEEVHGPKELVERVEPEDDSDEELVRQQ
DSDAEEGEDYHMEKLRQYQLNRLRYYYAVVECDSIDTADKVYKECDGIEY
ESSATRVDLRFIPDDTSFEEDTPSDECFELPDASSYKPRQFTTTALQQAK
VDLTWDETALDRRELGDKLSSGQVDKLTDKELRQIVAYSSEEEDSEAEES
PAEEAAQKAVSEDPQKSKPKKTSKQERIATYKNLLADILEQEKKEKEQKY
EMEMTWNVEPQHEEAQPEQQAQAELTPIEKVIQKRSEKNRQRKEQRRQRQ
IEARGGDAGEDSDESMVPDGIDLNDAYFAEEFANGDYAPPKTKQDKKKKK
KKGKDDGEEDVEAKRQEKELELLLDDGDGRDEKQHFSLTKILKKEEQEAS
GSKRKRRQKLKKSKNQPQNAEKLDDDFQVNLNDNRFSAVYKSHEYNIDPT
HSHYKPTKGMQQIIGEKLKRRKEQGEGGAANGDADGDEQVAPKRSKQQLE
QNALVKSLKRKIQLQQQGQKLASFLDH
BO32838.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:16:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11417-PA | 771 | CG11417-PA | 1..771 | 1..771 | 3974 | 100 | Plus |
| Strn-Mlck-PT | 7905 | CG44162-PT | 3714..4362 | 107..770 | 207 | 18.9 | Plus |
| Strn-Mlck-PV | 7944 | CG44162-PV | 3753..4401 | 107..770 | 207 | 18.9 | Plus |
| Strn-Mlck-PS | 8216 | CG44162-PS | 3714..4362 | 107..770 | 207 | 18.9 | Plus |
| Strn-Mlck-PU | 8255 | CG44162-PU | 3753..4401 | 107..770 | 207 | 18.9 | Plus |
| Strn-Mlck-PT | 7905 | CG44162-PT | 4314..5012 | 14..770 | 187 | 19 | Plus |
| Strn-Mlck-PV | 7944 | CG44162-PV | 4353..5051 | 14..770 | 187 | 19 | Plus |
| Strn-Mlck-PS | 8216 | CG44162-PS | 4314..5012 | 14..770 | 187 | 19 | Plus |
| Strn-Mlck-PT | 7905 | CG44162-PT | 4174..4817 | 108..770 | 175 | 19.4 | Plus |
| Strn-Mlck-PV | 7944 | CG44162-PV | 4213..4856 | 108..770 | 175 | 19.4 | Plus |
| Strn-Mlck-PS | 8216 | CG44162-PS | 4174..4817 | 108..770 | 175 | 19.4 | Plus |
| Strn-Mlck-PT | 7905 | CG44162-PT | 3452..4037 | 148..770 | 174 | 18.5 | Plus |
| Strn-Mlck-PV | 7944 | CG44162-PV | 3491..4076 | 148..770 | 174 | 18.5 | Plus |
| Strn-Mlck-PS | 8216 | CG44162-PS | 3452..4037 | 148..770 | 174 | 18.5 | Plus |
| Strn-Mlck-PT | 7905 | CG44162-PT | 4564..5152 | 108..699 | 164 | 19.1 | Plus |
| Strn-Mlck-PV | 7944 | CG44162-PV | 4603..5191 | 108..699 | 164 | 19.1 | Plus |
| Strn-Mlck-PS | 8216 | CG44162-PS | 4564..5152 | 108..699 | 164 | 19.1 | Plus |
