Clone BO32904 Report

Search the DGRC for BO32904

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:329
Well:4
Vector:pDNR-Dual
Associated Gene/TranscriptCG13026-RB
Protein status:BO32904.pep: Imported from assembly
Sequenced Size:388

Clone Sequence Records

BO32904.complete Sequence

388 bp assembled on 2012-07-13

GenBank Submission: KX797420

> BO32904.complete
GAAGTTATCAGTCGACATGAAGAGCCTTTTTGCTACCATGTTGGGCTACT
TGCTCCTTGGGTTGGTGCTGTCTCATGCCAGCTTTGCAACTGCCACAAAT
GGAGTTATTCCAGCAGTGATTCCGGCAGTGCCCGCTACTGTTCCTCGCCT
GGTTCCCGTGGCCACCAGCCATCAGTTTGTCACTCGAAACTGGAATCGAG
TTTTCGTGCCCCCCGCCACGGTGGCCACTTATCCCAACACCTATGTTAAG
TACAGCGGTGGCTATCCGGCGTATCCCGCCTACAATTACCCATACGCCAC
CACCTATCCGTACACCTATCCCTACTACTATCCCACTTATAACGTTGGAT
ATGGTTACAAGGGTGTCTGGGCAAGCTTTCTAGACCAT

BO32904.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:43:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG13026-RC 357 CG13026-PC 1..354 17..370 1770 100 Plus
CG13026-RB 357 CG13026-PB 1..354 17..370 1770 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:43:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG13026-RC 1431 CG13026-RC 45..399 16..370 1775 100 Plus
CG13026-RB 599 CG13026-RB 45..399 16..370 1775 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:43:29
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16725710..16726054 370..26 1725 100 Minus
Blast to na_te.dros performed on 2014-11-28 11:43:30 has no hits.

BO32904.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-13 13:50:16 Download gff for BO32904.complete
Subject Subject Range Query Range Percent Splice Strand
CG13026-RB 46..399 17..372 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:49 Download gff for BO32904.complete
Subject Subject Range Query Range Percent Splice Strand
CG13026-RB 46..399 17..372 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:50:06 Download gff for BO32904.complete
Subject Subject Range Query Range Percent Splice Strand
CG13026-RB 46..399 17..372 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:50:06 Download gff for BO32904.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16725707..16726056 23..372 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:49 Download gff for BO32904.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16718807..16719156 23..372 99   Minus

BO32904.pep Sequence

Translation from 16 to 388

> BO32904.pep
MKSLFATMLGYLLLGLVLSHASFATATNGVIPAVIPAVPATVPRLVPVAT
SHQFVTRNWNRVFVPPATVATYPNTYVKYSGGYPAYPAYNYPYATTYPYT
YPYYYPTYNVGYGYKGVWASFLDH

BO32904.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG13026-PC 118 CG13026-PC 1..118 1..118 648 100 Plus
CG13026-PB 118 CG13026-PB 1..118 1..118 648 100 Plus