BO32909.complete Sequence
1057 bp assembled on 2012-07-13
GenBank Submission: KX798274
> BO32909.complete
GAAGTTATCAGTCGACATGTATCGCAATATACTCTGCCTGGTGCTGGGCC
TCATCATTGGCATTCAACTGACAGACTTCTTAGAGTACTTTCAGCTGACC
GATAGTCAGTTCGCCAGCACGTCCATTACGCAGCTGGAGGAAGGGGCCAG
CCAGCTGGCGACGGAGGAGGAACTGGCCTTGTGGCTCCATAACGAGACAC
GGGTACTCTGCATGGTGCTAACCCTGCCAAAGAATCACCAATCAAGAGTG
AGACGAGTTAAGGGCACATGGGGCAGGCGCTGCAACAAGCTGATCTTCAT
CAGCAGCCAGGAGGATCGGGAACTGGGCGTCATTGATGTGGGCGTGCCCG
AGGATCGAAACAACCTGTATCTCAAAATGAGGAAGGCCCTAGAGTATGTG
TACCGGAACCATGGAGAAGACTACGACTGGTTCCTCAAGGCAGATGATGA
CACCTTTGTGATAATGGAAAACCTGCGCTTCCTGCTCTATCCCTATGATC
CCGAGGCAGCGCTCTACTTTGGCCACAGATTCCGCACCACCTTTCCGCAG
GGCTACATGTCCGGAGGAGCTGGCTATGTGATGAGTCGGGATGCACTGCG
TCGGCTCAATCTCTTTGCCTTCAACAACAGCCAATTCTGCCCGATTAACA
ACAATTCAGAGGACAGGCAGATTGGCTTCTGCCTGCAAAATGTGGGAGTA
GTTGCAGGGGATTCGCGGGATGAGGAAGGCCGGGATCGGTTTCTGCCCTT
GTCTCTCAAATTTATGCTGCCTACCTTTCCCACCGACAATTGGCTGCCCA
AACTGACATTTTATGAACCAGTGAATGAAACTGGCTCGACTTCGGGAATC
AGCTTTCACTATGTCAAAATCCACGAGTTCGAAATGTATGAATACCTGCT
ATATCGATTGCACATTTTTGGAACTCCCTTGTCCCAGAGAACGCTGCCAC
CCCGACTGGGTCCCGATGAACTGCAGAATCAGCTGAATCAGTGGGCTCAA
GAAAATAGCACGAATTCAAACGCGTGGCTGAAACAAGAAGCAAGCTTTCT
AGACCAT
BO32909.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:43:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34056-RA | 1026 | CG34056-PA | 1..1023 | 17..1039 | 5115 | 100 | Plus |
| CG2975-RA | 1158 | CG2975-PA | 317..380 | 264..327 | 185 | 85.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:43:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34056-RA | 1303 | CG34056-RA | 160..1187 | 12..1039 | 5125 | 99.9 | Plus |
| CG2975-RA | 1884 | CG2975-RA | 843..906 | 264..327 | 185 | 85.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:43:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 896110..896551 | 12..453 | 2195 | 99.8 | Plus |
| 3L | 28110227 | 3L | 896608..896976 | 454..822 | 1845 | 100 | Plus |
| 3L | 28110227 | 3L | 897030..897248 | 821..1039 | 1095 | 100 | Plus |
| 2L | 23513712 | 2L | 2841313..2841376 | 264..327 | 185 | 85.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:43:36 has no hits.
BO32909.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-13 13:50:17 Download gff for
BO32909.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34056-RA | 165..1187 | 17..1041 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:52 Download gff for
BO32909.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34056-RA | 165..1187 | 17..1041 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:50:08 Download gff for
BO32909.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34056-RA | 165..1187 | 17..1041 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:50:08 Download gff for
BO32909.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 896115..896551 | 17..453 | 100 | -> | Plus |
| 3L | 896608..896974 | 454..820 | 100 | -> | Plus |
| 3L | 897030..897248 | 821..1041 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:52 Download gff for
BO32909.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 896115..896551 | 17..453 | 100 | -> | Plus |
| arm_3L | 896608..896974 | 454..820 | 100 | -> | Plus |
| arm_3L | 897030..897248 | 821..1041 | 99 | | Plus |
BO32909.pep Sequence
Translation from 16 to 1057
> BO32909.pep
MYRNILCLVLGLIIGIQLTDFLEYFQLTDSQFASTSITQLEEGASQLATE
EELALWLHNETRVLCMVLTLPKNHQSRVRRVKGTWGRRCNKLIFISSQED
RELGVIDVGVPEDRNNLYLKMRKALEYVYRNHGEDYDWFLKADDDTFVIM
ENLRFLLYPYDPEAALYFGHRFRTTFPQGYMSGGAGYVMSRDALRRLNLF
AFNNSQFCPINNNSEDRQIGFCLQNVGVVAGDSRDEEGRDRFLPLSLKFM
LPTFPTDNWLPKLTFYEPVNETGSTSGISFHYVKIHEFEMYEYLLYRLHI
FGTPLSQRTLPPRLGPDELQNQLNQWAQENSTNSNAWLKQEASFLDH
BO32909.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34056-PA | 341 | CG34056-PA | 1..341 | 1..341 | 1819 | 100 | Plus |
| CG34057-PA | 355 | CG34057-PA | 21..355 | 1..335 | 900 | 49.6 | Plus |
| CG34057-PB | 344 | CG34057-PB | 55..344 | 47..335 | 837 | 51.7 | Plus |
| C1GalTA-PA | 388 | CG9520-PA | 20..376 | 3..333 | 669 | 40.9 | Plus |
| C1GalTA-PC | 388 | CG9520-PC | 20..376 | 3..333 | 669 | 40.9 | Plus |
