BO32915.complete Sequence
2176 bp assembled on 2012-07-30
GenBank Submission: KX799373
> BO32915.complete
GAAGTTATCAGTCGACATGGAATTAGAGAATATTGTGGCCAATACGGTCT
ACTTGAAAGCGAGAGAAGGTGGTTCCGACAGCAACAAGGGAAAGAGCAAA
AAATGGCGCAAAATATTGCAATTCCCACACATATCGCAATGCATCAACCT
GAAAGACAAATTAGATATAAGCTATGGCTACGTGATAGATCAGCAACCCA
TTGGTCGTGAGCTCTTCCGTCTGTTTTGCGAGAACAAACGGCCCGTCTAC
TTTCGCTACATCACCTTCCTGGATGAGGTGGTCAAATACGAGATCGAGTA
CATCTCGAACCGCATATTCATTGGCCATGACATCGGCCGTCGCTTCTTGG
ATGTCGAGGCACAGCTGGAGCTGCGCAACGGCAGCGGGGGCGACGCCTTG
GACGCCGAGACGCAGGAGGAGCTGCTGCTCAACAGCAGCAATGCCAATCC
AACTGAAACAGCTGAGACTGAACACTGCAACAATACCACCGCCAACAACT
GCAACAACATCAACAACAGCAACAACTCGCAGCACAGCAGCGACATCAAT
CACAAGAAGCTGGACACGCGCAATCACAACGGCGACGACGCCACTGGGAA
CGGGAGCAGCCACCAGGACGACGGGGACGAGAGCGTCAAGTGCCAGGAGG
GCCATGACGATGCGGAAAAGGGTGGTGGCGGAGAGGGAGGCGGCGGCGGA
AAGTGTGTCCCCGTGGGCGGGTATCCTGACGAACTCGTGTTGGACGTGCT
TAACGATGATCTCATTGCGCAAGTGCGTAACAAACTCAACAGCGGCGGCA
AGGACATCTTTGCCCAGTGTGTGAACGCGGTTAAGGCGTTCCTGGCCGGC
GAACCGTTCCGGGAGTTTGAGAGCTCTATGTATTTTCACCGATACTTGCA
ATGGAAGTGGCTTGAGGCGCAGCCCATCACCTACAAAACGTTTCGCATGT
ACCGGGTGCTCGGAAAGGGCGGCTTCGGCGAGGTGTGCGCCTGTCAGGTG
CGGGCCACTGGGAAAATGTACGCGTGCAAAAAGCTGGAGAAAAAGCGCAT
CAAGAAGCGCAAGGGCGAGTCGATGGTGTTAATCGAGAAGCAGATACTGC
AGAAAATCAACTCGCCGTTCGTGGTCAATCTGGCCTACGCGTACGAGACA
AAGGACGCCCTCTGCCTGGTGCTGACCATAATGAATGGCGGCGATTTGAA
ATTCCACATTTACAACATGGGCGGCGAACCAGGCTTTGAACTGGAGCGTG
CCCGCTTCTATGCCGCCGAGGTGGCCTGTGGACTGCAGCACCTGCACAAG
CAGGGCATCGTCTACCGGGATTGCAAGCCGGAAAACATCCTCCTTGACGA
TCACGGCCATGTGCGCATTTCCGACCTGGGACTGGCCGTCGAGATACCGG
AGGGCGAGATGGTGCGCGGCCGGGTGGGCACAGTGGGCTACATGGCCCCC
GAGGTCATCGACAACGAGAAGTACGCCTTCTCCCCGGACTGGTTCAGCTT
CGGCTGCCTGCTGTACGAGATGATCGAGGGCCAAGCGCCGTTCCGGATGC
GCAAGGAGAAGGTCAAGCGCGAGGAGGTGGACAGGCGCGTTAAGGAGGAC
CCCGAAAAGTATTCAAGCAAGTTTAATGATGAAGCCAAATCAATGTGCCA
ACAGCTGTTAGCTAAATCGATAAAGCAGCGCCTGGGCTGCCGCAACGGTC
GCATGGGCGGGCAGGATGTGATGGCCCACCCGTTTTTCCACTCCACCCAG
CTCAATTGGCGTCGCCTGGAGGCTGGTATGCTGGAGCCACCCTTTGTGCC
AGACCCGCACGCCGTTTACGCCAAAGATGTGCTCGATATTGAACAGTTCT
CTACGGTGAAGGGCGTCAATATCGACGAATCCGACACGAATTTCTATACG
AAATTCAACACAGGCTCCGTGTCCATTTCCTGGCAGAACGAGATGATGGA
GACCGAGTGCTTTCGGGAACTGAATGTTTTTGGTCCCGAGGAGTGTCCCA
CGCCAGATTTGCAAATTAATGCAGCGCCCGAACCAGACAAGGCGGGCTGT
TTCCCCTTTCGCCGGAAGAAGAAGCAGCCGGCTCGCACTCAGCCCATACC
CATTCCGGAGCATCTGTTAACCACTAGTCACAGCGTGTCCTCCACGACGG
TCGAAAGCGCAAGCTTTCTAGACCAT
BO32915.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:54:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gprk2-RB | 2145 | CG17998-PB | 1..2142 | 17..2158 | 10710 | 100 | Plus |
| Gprk2-RA | 2145 | CG17998-PA | 1..2142 | 17..2158 | 10710 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:54:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gprk2-RB | 3545 | CG17998-RB | 1091..3232 | 17..2158 | 10710 | 100 | Plus |
| Gprk2-RA | 4690 | CG17998-RA | 1139..3280 | 17..2158 | 10710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:54:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31453647..31454260 | 282..895 | 3040 | 99.7 | Plus |
| 3R | 32079331 | 3R | 31456048..31456311 | 1805..2068 | 1320 | 100 | Plus |
| 3R | 32079331 | 3R | 31455206..31455456 | 1187..1437 | 1255 | 100 | Plus |
| 3R | 32079331 | 3R | 31455742..31455953 | 1593..1804 | 1060 | 100 | Plus |
| 3R | 32079331 | 3R | 31454572..31454765 | 995..1188 | 970 | 100 | Plus |
| 3R | 32079331 | 3R | 31455527..31455686 | 1436..1595 | 800 | 100 | Plus |
| 3R | 32079331 | 3R | 31453464..31453586 | 163..285 | 615 | 100 | Plus |
| 3R | 32079331 | 3R | 31454394..31454502 | 891..999 | 545 | 100 | Plus |
| 3R | 32079331 | 3R | 31453309..31453406 | 67..164 | 490 | 100 | Plus |
| 3R | 32079331 | 3R | 31456372..31456463 | 2067..2158 | 460 | 100 | Plus |
| 3R | 32079331 | 3R | 31433837..31433890 | 17..70 | 270 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 11:54:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2346..2540 | 413..615 | 255 | 64.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6942 | 413..638 | 250 | 64 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2301..2520 | 407..622 | 245 | 60.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6733..6919 | 361..549 | 236 | 63.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2496 | 413..580 | 218 | 61.6 | Plus |
BO32915.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-30 09:39:47 Download gff for
BO32915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gprk2-RA | 1135..3276 | 17..2160 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:37 Download gff for
BO32915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gprk2-RA | 1139..3280 | 17..2160 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:53:11 Download gff for
BO32915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gprk2-RA | 1139..3280 | 17..2160 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:53:11 Download gff for
BO32915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31433837..31433888 | 17..68 | 100 | -> | Plus |
| 3R | 31453311..31453406 | 69..164 | 100 | -> | Plus |
| 3R | 31453466..31453586 | 165..285 | 100 | -> | Plus |
| 3R | 31453651..31454256 | 286..891 | 100 | -> | Plus |
| 3R | 31454395..31454500 | 892..997 | 100 | -> | Plus |
| 3R | 31454575..31454764 | 998..1187 | 100 | -> | Plus |
| 3R | 31455207..31455455 | 1188..1436 | 100 | -> | Plus |
| 3R | 31455528..31455685 | 1437..1594 | 100 | -> | Plus |
| 3R | 31455744..31455953 | 1595..1804 | 100 | -> | Plus |
| 3R | 31456048..31456311 | 1805..2068 | 100 | -> | Plus |
| 3R | 31456374..31456463 | 2069..2160 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:37 Download gff for
BO32915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27281770..27282033 | 1805..2068 | 100 | -> | Plus |
| arm_3R | 27282096..27282185 | 2069..2160 | 97 | | Plus |
| arm_3R | 27259559..27259610 | 17..68 | 100 | -> | Plus |
| arm_3R | 27279033..27279128 | 69..164 | 100 | -> | Plus |
| arm_3R | 27279188..27279308 | 165..285 | 100 | -> | Plus |
| arm_3R | 27279373..27279978 | 286..891 | 100 | -> | Plus |
| arm_3R | 27280117..27280222 | 892..997 | 100 | -> | Plus |
| arm_3R | 27280297..27280486 | 998..1187 | 100 | -> | Plus |
| arm_3R | 27280929..27281177 | 1188..1436 | 100 | -> | Plus |
| arm_3R | 27281250..27281407 | 1437..1594 | 100 | -> | Plus |
| arm_3R | 27281466..27281675 | 1595..1804 | 100 | -> | Plus |
BO32915.pep Sequence
Translation from 16 to 2176
> BO32915.pep
MELENIVANTVYLKAREGGSDSNKGKSKKWRKILQFPHISQCINLKDKLD
ISYGYVIDQQPIGRELFRLFCENKRPVYFRYITFLDEVVKYEIEYISNRI
FIGHDIGRRFLDVEAQLELRNGSGGDALDAETQEELLLNSSNANPTETAE
TEHCNNTTANNCNNINNSNNSQHSSDINHKKLDTRNHNGDDATGNGSSHQ
DDGDESVKCQEGHDDAEKGGGGEGGGGGKCVPVGGYPDELVLDVLNDDLI
AQVRNKLNSGGKDIFAQCVNAVKAFLAGEPFREFESSMYFHRYLQWKWLE
AQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG
ESMVLIEKQILQKINSPFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYN
MGGEPGFELERARFYAAEVACGLQHLHKQGIVYRDCKPENILLDDHGHVR
ISDLGLAVEIPEGEMVRGRVGTVGYMAPEVIDNEKYAFSPDWFSFGCLLY
EMIEGQAPFRMRKEKVKREEVDRRVKEDPEKYSSKFNDEAKSMCQQLLAK
SIKQRLGCRNGRMGGQDVMAHPFFHSTQLNWRRLEAGMLEPPFVPDPHAV
YAKDVLDIEQFSTVKGVNIDESDTNFYTKFNTGSVSISWQNEMMETECFR
ELNVFGPEECPTPDLQINAAPEPDKAGCFPFRRKKKQPARTQPIPIPEHL
LTTSHSVSSTTVESASFLDH
BO32915.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:16:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gprk2-PB | 714 | CG17998-PB | 1..714 | 1..714 | 3814 | 100 | Plus |
| Gprk2-PA | 714 | CG17998-PA | 1..714 | 1..714 | 3814 | 100 | Plus |
| Gprk1-PC | 700 | CG40129-PC | 144..525 | 263..646 | 753 | 41.3 | Plus |
| Gprk1-PA | 700 | CG40129-PA | 144..525 | 263..646 | 753 | 41.3 | Plus |
| Gprk1-PB | 700 | CG40129-PB | 144..525 | 263..646 | 753 | 41.3 | Plus |
