Clone BO32950 Report

Search the DGRC for BO32950

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:329
Well:50
Vector:pDNR-Dual
Associated Gene/TranscriptCG42388-RE
Protein status:BO32950.pep: Imported from assembly
Sequenced Size:3709

Clone Sequence Records

BO32950.complete Sequence

3709 bp assembled on 2012-07-30

GenBank Submission: KX796639

> BO32950.complete
GAAGTTATCAGTCGACATGAACCACCTGCGGGTGCACAAATTCAAGCTGG
GCGGCAAAGATAATGCCGCCATGGCCGATTTGCCCCAATCGGAAAACACC
ACCAACAATAACAATAATATCGGAAGCAATAATAATCAAAAAGGCGGTGC
AAAAGGATTTCTGGGAAGGATTAAGCGCTACTCAGTGTTGGGAAATAAAC
TGGGACGTCGTAATCTCGGCAGTATGAATTTGAATCCGCCGAATAATGTC
GTTGATAATTCCGTTTCGCCCACTAAACTCCATACTGGAAGCTACAATAT
GACCGGTAGCCATTCCGATGATCATCGCCTGGAAATCGGAGCTCCGATTT
TAATATCGACTACAACATTGGACACCGACCGTTTCGATGTCACGGAGGCG
AGACTCAAACAGATTGGCGGCGGCATAGCCCAGACCTCCAGTATAGTAAG
AACCCTGACGCCCAGGAGTTCGGATGAGGAGGAGTTTGTGGACGCCAGGA
GTAGTCCGCAACAAATGGAAAGGGATGAGGATCTGCAAATCGCTGATGAT
CAGGTCGAAAAGAACGATCGCGATCAGTATGGTCATCAATTTCAGCTTCC
TAAGAAACAACATCGTGAAGAAGAGATGGGGGACTTAAAATATCTAGACG
ATCTGGAGGAACCAGAACAATTTGAGACGCCCAAACACGAGGTGGAGGAA
AAGCTCCTGACTGCCAACCAGGATGTGAAGCGCCCCATAACGCCCATAAC
CATTGCCATAGATCCCCCAATCAGACGACCACGTATTGCCCGCCAGCAAA
GGCAATCGCAATCCGTTCAGAATCTGCATCGCAGCGAACTGAAGGTATAC
CTGCACAAGTCCAACTCCGTGGCGCTGGACATGAATGTCACGGCTCCGGC
AAAGCTGGGCTTGGACTTGAATCTGCCCGAGTTGCCGGAACTCTATGGAG
CCAGCGAGCTCAGTTTGGCGGCCAGTGATAATAAGGAAAATCTGCCAGCG
GTGAAGCCATCCGCTGAGCGATCGCCCATACCAAATGGTGGCTTCATGGC
CCAGCAGCCACATTTCAAGAGCCTAGACTCGTTCCACCTGAACACCCGCT
CCCATTCGAATCAGAGCTCCCAACAGAGTTCCCGCCAAAGCTTGGCCTGC
AGCAGCAGCAATGGGGAATACGACTTTGATCTGAAGTCGGTGAGCTATCA
GAGCCTGAATGCCCAGAATCTGTTCGTTTCGATTGACGAACTGCAGGAGC
TAACGCGTCAGATCAACGAAACGGAGGATTTTGGCAAGGAGATCGATCTG
GAGTACTGCGCGCATCGCGATCAATTGAGACCCAGTGAACGCAGGATCAC
CCTGCTGAAGAACAAAAACCAAACGTTGATCAACTTCAATCACAACAAGG
AGAAGCTGCGTAAGGGCTGGCACGGCATGAAGCACTGGCTGGGCGAGGAG
GGCTCCAAGATTAAGGAGGCAGTGCGTCAACAGACGCCCCTCAAACGTCT
GGCCCAATCACGGAGCAATCTTAACCAGTCAACTGCGGATGCCAGTCGCC
AGTCAATGTCGCCGGAACGCACTCAACGCGATGTAACCGAGAGCTGTGAG
GATGTCACCGAACGCACCGAAATGGAGTCGTCCATGTCGCACCGAAACAG
CGAGGAGGATCTGTCGCCGCATGCCAAGCGGTTCAAGGATGAGGGACAGA
ACGGCTTCGAGGAACTCCGGCGATATGTGAAGCAGGGCGGTGATTTTAGC
AAGGAGCTCATCTTTGTCCTGCAGGAGAGAGCCGATTCGGAGCTGATCTA
CTCCAAGTCGCTATCGAAACTGGCCAACAAGCTGAACAAAGCGGGCAGGG
AAATTCCCGGGAGCGTGGCCGACGCCTGGCGTGGAGTGGCTACGGAGATG
GAGAGCCGCAGCGACATCCATCGCCAGTTGGCAGCCTCGCTAACGGATGA
GCTGGTCAAGCCGCTCAAGATCGTCGTCGAAGGACATCACAAGGCGCGCA
AGGCGGTGGAAAGCAACGTGGACAAGGCGGCGCGAGTACTGGGCGAATGG
CGAGCCAGCGAGGCGAAAGCCAAGAAGGCCTCCCATACGGCGGCGCGCGA
GAACGAGAAGCTGCAGGACGCAATGCTGGACGTGCGCATCCAGAAGTCAC
CATCGATTGCCCTGCTCCACCAGGGACCCAACAAGCAGGCCGCAGAAAAG
GAGCTCAAGTCAGCGGAGAAGGATTGCGTCAAGCTGGATAACAAGCGCAA
GAAGGCCGAGGAGGCGGTGAAGCGTGCGGATGTGGAATACTACACCCTGT
GCGTGCGTTCGGAGCGAGCACGCGTAGACTGGGAGATGGCCGTGCTCCGG
GGAAGTGCCCAACTGCAGAGCAGCGAACAGCAGCGGCTGGGCAATATGCA
CAACTTTGCCCAGCAGTATGCACGCCTCATCTCGGACATGAATCCGATAC
TCGGTGGCCTGAGCACACGCCTGCAGCCGCAACTCGATGCTTGCAATGTG
GCTAAGGATATGCAAGTGGTGCGCCACATCCGCCGCAATTCGGAGGGACC
CAGTGAGCAACTCCTACCGGACTTTTACTGCGAACACACCACGCTGGCCA
TGAATCGGGAGCGTCGCAAGCACGCTCTGATCAAGCTGCTGCAGCTGGTC
AAGACGGATCTGGAGCGGGAGCGACGATCCCGCGACGGATTGAGGGGACT
GTCGCAATCGCTTAACCATCAGGAGCATCAGAACATCACCGATAAGCTGT
ACCACATTCGTTCCATGCTGACCTATTTGGAGGGCGCCCGTCTCAAGCTG
CACTCTGCCCTCTTGGAGCTGGACCACAAGCCCAGAGCCACTCACCCACT
GGCCCAGCACATTCATATCACCCGTGACCGCACTGGTTTGCAGCAGAGCA
TCCTGAAGGTGCCCAACTGGCTGAAGAACAACGACAAGTCGCAGACGCAG
CAATCGACCAGTATGCTGGCCCACGACATCACCGACATAACCACTAACCA
CGAGGATGAGCTTCCCGACGAGAACTGCTCCCACCTGCACAGCAGTAGCC
ATAGCAACAATAATAGCAACGGCTCCTGCACAGATGTCAGTTCGGTGGTG
AAGCCTTTTAACCGAAGCAAAAGCAACATCGAGACCAATTTCACCAGTCA
ACCAAAGATAATCTCGACGACAAATGCCGCGATTGCCGTGTCCGTTAAGT
CCAAAACCCTGGCCAATCTGCAGGATGGCCATCACAATAACCAACAGCAC
CATCATCATCATCATAATCATCACAGCGATCGCGGCCAGGCGGATGGTGG
ATCCAATCAGCAGGACTCTGATTTCGATGAGTTCAGCTCGCAGGACGAGG
ACGACGAGCCGCAGCAGCCGCAGCAACAACCGCAGCCGTTGCAATCGCAG
CAGCAGCAACAGCAGCCGTTGCTGCAAAATCCAACCATCAATGGCCAAGT
GCAGACGCAGCATTTCTATCAGAATGCGCAGGAACTGCAGAAGGGCCAAA
AGAACGGATCCGTTCCGATACTGGGACGCTGCAAGGCACTGTATAGCTAC
ACCCCGAAGCTCTACGACGAGCTGGAACTGAGTCCCGGCGACATCATCGA
GGTGCATGCCAAACAGGACGACGGCTGGTGGCTGGGCGCCCTGCGCAATC
ACATCGGCATCTTTCCGGCCACCTATGTGGAGGAGTGCGCCGCAAGCTTT
CTAGACCAT

BO32950.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:54:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG42388-RG 3678 CG42388-PG 1..3675 17..3691 18375 100 Plus
CG42388-RE 3678 CG42388-PE 1..3675 17..3691 18375 100 Plus
CG42388-RH 3993 CG42388-PH 316..3990 17..3691 18375 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:54:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG42388-RG 5133 CG42388-RG 158..3832 17..3691 18375 100 Plus
CG42388-RE 3916 CG42388-RE 197..3871 17..3691 18375 100 Plus
CG42388-RH 5956 CG42388-RH 981..4655 17..3691 18375 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:54:47
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9049259..9050941 17..1699 8400 99.9 Plus
X 23542271 X 9052450..9053274 2867..3691 4125 100 Plus
X 23542271 X 9051467..9052217 2005..2755 3755 100 Plus
X 23542271 X 9051183..9051412 1778..2007 1150 100 Plus
X 23542271 X 9052278..9052388 2756..2866 555 100 Plus
X 23542271 X 9051035..9051122 1692..1779 440 100 Plus
Blast to na_te.dros performed on 2014-11-28 11:54:49 has no hits.

BO32950.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-30 09:39:53 Download gff for BO32950.complete
Subject Subject Range Query Range Percent Splice Strand
CG42388-RG 158..3832 17..3693 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:53 Download gff for BO32950.complete
Subject Subject Range Query Range Percent Splice Strand
CG42388-RH 981..4655 17..3693 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:53:26 Download gff for BO32950.complete
Subject Subject Range Query Range Percent Splice Strand
CG42388-RH 981..4655 17..3693 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:53:26 Download gff for BO32950.complete
Subject Subject Range Query Range Percent Splice Strand
X 9049259..9050935 17..1693 100 -> Plus
X 9051037..9051122 1694..1779 100 -> Plus
X 9051185..9051410 1780..2005 100 -> Plus
X 9051468..9052217 2006..2755 100 -> Plus
X 9052278..9052388 2756..2866 100 -> Plus
X 9052450..9053274 2867..3693 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:53 Download gff for BO32950.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8946483..8947307 2867..3693 99   Plus
arm_X 8943292..8944968 17..1693 100 -> Plus
arm_X 8945070..8945155 1694..1779 100 -> Plus
arm_X 8945218..8945443 1780..2005 100 -> Plus
arm_X 8945501..8946250 2006..2755 100 -> Plus
arm_X 8946311..8946421 2756..2866 100 -> Plus

BO32950.pep Sequence

Translation from 16 to 3709

> BO32950.pep
MNHLRVHKFKLGGKDNAAMADLPQSENTTNNNNNIGSNNNQKGGAKGFLG
RIKRYSVLGNKLGRRNLGSMNLNPPNNVVDNSVSPTKLHTGSYNMTGSHS
DDHRLEIGAPILISTTTLDTDRFDVTEARLKQIGGGIAQTSSIVRTLTPR
SSDEEEFVDARSSPQQMERDEDLQIADDQVEKNDRDQYGHQFQLPKKQHR
EEEMGDLKYLDDLEEPEQFETPKHEVEEKLLTANQDVKRPITPITIAIDP
PIRRPRIARQQRQSQSVQNLHRSELKVYLHKSNSVALDMNVTAPAKLGLD
LNLPELPELYGASELSLAASDNKENLPAVKPSAERSPIPNGGFMAQQPHF
KSLDSFHLNTRSHSNQSSQQSSRQSLACSSSNGEYDFDLKSVSYQSLNAQ
NLFVSIDELQELTRQINETEDFGKEIDLEYCAHRDQLRPSERRITLLKNK
NQTLINFNHNKEKLRKGWHGMKHWLGEEGSKIKEAVRQQTPLKRLAQSRS
NLNQSTADASRQSMSPERTQRDVTESCEDVTERTEMESSMSHRNSEEDLS
PHAKRFKDEGQNGFEELRRYVKQGGDFSKELIFVLQERADSELIYSKSLS
KLANKLNKAGREIPGSVADAWRGVATEMESRSDIHRQLAASLTDELVKPL
KIVVEGHHKARKAVESNVDKAARVLGEWRASEAKAKKASHTAARENEKLQ
DAMLDVRIQKSPSIALLHQGPNKQAAEKELKSAEKDCVKLDNKRKKAEEA
VKRADVEYYTLCVRSERARVDWEMAVLRGSAQLQSSEQQRLGNMHNFAQQ
YARLISDMNPILGGLSTRLQPQLDACNVAKDMQVVRHIRRNSEGPSEQLL
PDFYCEHTTLAMNRERRKHALIKLLQLVKTDLERERRSRDGLRGLSQSLN
HQEHQNITDKLYHIRSMLTYLEGARLKLHSALLELDHKPRATHPLAQHIH
ITRDRTGLQQSILKVPNWLKNNDKSQTQQSTSMLAHDITDITTNHEDELP
DENCSHLHSSSHSNNNSNGSCTDVSSVVKPFNRSKSNIETNFTSQPKIIS
TTNAAIAVSVKSKTLANLQDGHHNNQQHHHHHHNHHSDRGQADGGSNQQD
SDFDEFSSQDEDDEPQQPQQQPQPLQSQQQQQQPLLQNPTINGQVQTQHF
YQNAQELQKGQKNGSVPILGRCKALYSYTPKLYDELELSPGDIIEVHAKQ
DDGWWLGALRNHIGIFPATYVEECAASFLDH

BO32950.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:17:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG42388-PG 1225 CG42388-PG 1..1225 1..1225 6353 100 Plus
CG42388-PE 1225 CG42388-PE 1..1225 1..1225 6353 100 Plus
CG42388-PH 1330 CG42388-PH 106..1330 1..1225 6353 100 Plus
CG42388-PC 768 CG42388-PC 31..768 496..1225 3479 92 Plus
CG42388-PD 675 CG42388-PD 3..675 555..1225 3468 99.3 Plus