BO32952.complete Sequence
265 bp assembled on 2012-07-13
GenBank Submission: KX798653
> BO32952.complete
GAAGTTATCAGTCGACATGGCACGTGGACACCAGAAGATCCAGTCGCAGG
CGAAGGCCTCCGAGAAGCAGGCCAAACTAAAGAAGCAACAAGGACACAGT
GCCAACGACCAGAAGAAGGCGGCCCAAAAGGCACTTGTCTATGTGTGCGC
CGTTTGCAAGTCGCAAATGCCCGATCCCAAGACGTATAAACAGCACTTCG
AGAACAAGCATCCCAAGAACGACATACCCGAGGAGCTGAAGGAGGTCGCA
AGCTTTCTAGACCAT
BO32952.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:43:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15715-RB | 234 | CG15715-PB | 1..231 | 17..247 | 1155 | 100 | Plus |
| CG15715-RA | 234 | CG15715-PA | 1..231 | 17..247 | 1155 | 100 | Plus |
| CG18081-RC | 234 | CG18081-PC | 1..231 | 17..247 | 1020 | 96.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:43:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15715-RB | 969 | CG15715-RB | 270..500 | 17..247 | 1155 | 100 | Plus |
| CG15715-RA | 735 | CG15715-RA | 233..463 | 17..247 | 1155 | 100 | Plus |
| CG18081-RC | 717 | CG18081-RC | 198..428 | 17..247 | 1020 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:43:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15836780..15836923 | 160..17 | 720 | 100 | Minus |
| 3L | 28110227 | 3L | 15834734..15834877 | 160..17 | 705 | 99.3 | Minus |
| 3L | 28110227 | 3L | 15836162..15836250 | 247..159 | 445 | 100 | Minus |
| 3L | 28110227 | 3L | 15834365..15834453 | 247..159 | 325 | 91 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:43:53 has no hits.
BO32952.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-13 13:50:20 Download gff for
BO32952.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15715-RA | 231..461 | 17..249 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:59 Download gff for
BO32952.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15715-RA | 233..463 | 17..249 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:50:11 Download gff for
BO32952.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15715-RA | 233..463 | 17..249 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:50:11 Download gff for
BO32952.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15836159..15836248 | 161..249 | 97 | <- | Minus |
| 3L | 15836780..15836923 | 17..160 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:59 Download gff for
BO32952.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15829259..15829348 | 161..249 | 97 | <- | Minus |
| arm_3L | 15829880..15830023 | 17..160 | 100 | | Minus |
BO32952.pep Sequence
Translation from 16 to 265
> BO32952.pep
MARGHQKIQSQAKASEKQAKLKKQQGHSANDQKKAAQKALVYVCAVCKSQ
MPDPKTYKQHFENKHPKNDIPEELKEVASFLDH
BO32952.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15715-PB | 77 | CG15715-PB | 1..77 | 1..77 | 404 | 100 | Plus |
| CG15715-PA | 77 | CG15715-PA | 1..77 | 1..77 | 404 | 100 | Plus |
| CG18081-PC | 77 | CG18081-PC | 1..77 | 1..77 | 398 | 97.4 | Plus |
| CG18081-PB | 77 | CG18081-PB | 1..77 | 1..77 | 398 | 97.4 | Plus |
| CG18081-PA | 77 | CG18081-PA | 1..77 | 1..77 | 398 | 97.4 | Plus |
