Clone BO32976 Report

Search the DGRC for BO32976

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:329
Well:76
Vector:pDNR-Dual
Associated Gene/TranscriptCadN2-RC
Protein status:BO32976.pep: Imported from assembly
Sequenced Size:5431

Clone Sequence Records

BO32976.complete Sequence

5431 bp assembled on 2012-07-30

GenBank Submission: KX797965

> BO32976.complete
GAAGTTATCAGTCGACATGGTCGATCCATTAAAAATCTTTTGGGTTTTGA
CAAATAGCACCTATTTGGTTACAAAATTTGTACGCATTGGTATTGCCGAC
AAAAACGATTCACCGCCGTATTTCGATAGATTTCTGTACGAAACTGAAAT
CGATGAAAATGCCGACTTGCAGAGCACTGTCCTCACTGTCAACGCCAAGG
ATCACAATGAGTCGACGAATATTCGATACCAGATCACAGGCGGTAACATA
GGCAATGCATTTGCCGTACAGAACACCACCGGTGTCATTTACGTGGCAAG
TCCACTTGACTACGAAACGAGGCCAAGGTATGAACTGCGCCTGGAGGCAA
CTCGCAATCGCAAAAATAACTACACCACCGTTGTGATCAACGTTCGCGAT
GTCAACGATAATCCACCGGTATTCGATCGTCAAACATATCGTACACAAAT
CACTGAGGAAGACGATCGCAATCTGCCCAAACGCATTCTGCAGGTCACAG
CCACCGATGGCGATGTAGATAGACCAATAAATATTGTATATTTCCTGACT
GGTCAGGGCATCGACCCTGATAATCCAGCGAATAGTAAATTTGATATAAA
TCGCACGACGGGCGATATTTTTGTTCTCAAGCCCCTGGACCGAGATCAGC
CCAATGGGAGGCCACAGTGGCGCTTTACAGTATTTGCCCAGGACGAGGGT
GGCGAGGGGCTGGTAGGCTATGCGGACATCCAGGTGAACCTAAAGGACAT
CAACGACAATGCGCCGCAGTTTCCGCAGGGCATCTACTTTGGTAACGTGA
CCGAGAACGGCACCGCCGGCAGTTCGGTGATGACCATGTCCGCCGTCGAC
TACGACGATCCCAACGAGAGCACCAATGCCAAGCTAATCTACTCGATTGA
GAAGAACGTCATCGAGGAGGAGACGGGGGCGCCCATCTTTGAAATCGAGC
CGGAGACGGGACTCATCAAAACGGCTGTCTGTTGTCTGGACAGGGAGCGA
ACGCCCGACTACTCGATTCAGGTGGTGGCCATGGACGGCGGTGGACTTAA
AGGTACTGGCACCGCCTCCATTCGCGTCAAGGACCTCAACGACATGCCGC
CGCAGTTCACCAAGGACGAGTGGGTTACGGAGGTGGACGAAACGAATGGC
ACTTACATCCCAGAGACGCCCATTCTCACGGTGACGGTTCAGGATGAGGA
CGAAACGAACACGTTCCAATACAAGGTGGTGCCAAACAGTGGTTTCGGGG
CGGATAAATTTGCGATGGTTCGCAATGGCGATGGAACGGGCTCGTTGAAA
ATCATACAACCCCTGGACTACGAGGATCCGCTGCAAAGTAGTGGATTCCG
GTTCCGCATTCAGGTCAACGATAAAGGCGACGATGGACCCGGTGGAAGTG
ACAAGTACCATGTGGCCTATTCGTGGGTGGTGGTGAAGCTGCGAGATATT
AACGACAATGTGCCAAAATTCGATCGGGAGCATATAGAGGTCTCTATCTA
TGAGGATACGAAAGTGGGAACCATTCTCGAGCAATTTAAGGCCACGGATG
CCGACCAGGGCGGTCACTCCAAAGTAGCATACAAAATAGTTCGTTCCACA
AATCGTAAAAGACAATTTGCCATTAGTGATAGAGGAGCAGTGAGCATACA
AAGACCTTTGGATCGGGAAACTCAGGATCGACACCATATTCAGATTTTAG
CCATTGACGATGGCAGTCCTGCTCGAACTGCAACCGCAACTCTAACCGTG
ATAGTCAAGGATGTCAATGATAACGCGCCGACTTTTGCCCAGGACTATAA
GCCCACTTTGCCTGAGAATGTGTCTGGTAAAAAAATTCTTGAGGTGGCAG
CCAAGGATCCCGATGATCGACTAAGGGGCAACGGAGGACCCTTTACCTTT
CGATTGGATCCTTTGGCCAGCGATGAAATAAAAGCGGGCTTTAAAGTGGA
GTATGACCGAAGAGGTGACAATGAAAATGGGGTGGCCATCATTTCATCCC
TCCGTCCCTTTGATCGCGAGGCGCAAAAGAGCTATGCCATTCCCATTGAG
ATCAAGGATAATGGAGCTCCTGCCATGACGGGCACCAGTACTCTAACCGT
TACCATTGGCGATGTAAATGATAATAAAATGCAGCCCGGCAGCAAATCCG
TATTGGTATATAACTACCAAGGACAGTCGCAGGATACGCCGATTGGCAGG
GTCTATGTCAATGATCCCGATGACTGGGATGTGCCGGATAAGAAGTACTA
CTGGGAGGTTCAGGAGCACCAAAGATTTAAACTGGATACGGATACTGGTA
TTTTAACCATGAGAGCGGGAACGAGAAGAGGTCGCTATCAGTTGCGGTTC
AAGGTCTACGATCGTGAGCATGGTCAGGAGGATATTCCTGCCAATCTCAG
CGTTACAGTGCGCGACATAACAGCAGAGGCCGTTCAGCAAGCTGGTTCAA
TGAGGTTGTCTCACATAACCGATGAGGATTTCGTTAGAACTTGGAACCCG
GTTAAGAATCAAGTAGAGCCCTCCAAGCTAGAGAGATTTCGCAACAAGCT
GGCCGAATTATTGTACACCGATAGAGACAATGTCGACGTATTCAGTGTGC
AACTTAAGGAAGGTTCTCCTTATCCCCTAACCGATGTCCACTTTGCAGCT
CGATCTGCTACTCAGCAACCGTATTTCAAAGCAGTCCGCCTAAATGGTGT
GGTCCAAATGCATCGTGAGGAGATTGAAAAAGACGTGGGCCTGAACATCA
CCATGGTCAATATAAATGAGTGCTTGCATGAAGGTAAAGGGAAGTGTGGC
TCCAATTCCTGTACCTCCAAAGTTGAGTTGGGCAAAAAACCCTATACGGT
TAGTGTAAATCGCACTGCTTTGGTGGGCGTTCGTTTGGACATTAGTGCTC
AATGTGTTTGCCGGGCGAGGAACTTCACCCACCAGGATCACAATTGCAGG
ACCCACCTTTGTTATAATGGCGGTCGGTGTGTGGAAACCCGAAATGGTCC
GAAATGCGTGGCCTGTCCGGTGGGGTACAATGGCCCGCGATGTCAGCAAT
CCACGAGAAGTTTTCGCGGCAATGGCTGGGCCTGGTATCCTCCATTACAA
CTCTGCCAGGAATCCCATCTCAGCTTGGAATTCATCACTCGCGTTGCAGA
CGGCTTGATACTCTACAATGGACCCATTGTCCCACCAAAGCCAGAGGAAA
CCGTGATCAGCGACTTTATAGCTCTCGAACTGGAACAGGGCTATCCGCGT
CTACTCATCGATTTCGGCTCGGGAACTTTGGAGTTGAGGGTAAAGACCAA
GAAAACGCTGGATGATGGGGTCTGGCATCGATTGGATATTTTTTGGGATA
CCGAAAATGTCCGGATGGTTGTGGACTTTTGTCGCACTGCCTTGGTCTCC
GAAATGGAGGATGGCACTCCGCCGGAATTCGATGATAACGCCTGTCAGGC
GAGAGGACAAATTCCGCCATTTGCTGAGTCCCTAAATCTAAATCAACCCC
TTCAGTTGGGCGGACTCTATAGACAGCACTTCGATCAAACCCTTTACAAT
TGGCAGTATGCCTTCAGCTCCAAGGGCTTTGATGGTTGTATACGCAACGT
TATCCACAACTCAGAGCACTATGATTTGGCTTTTCCGGCTTTGGCCAGGA
ATAGTTTTCCCGCCTGTCCGCAGACCGACGAAGTTTGCCTGAAAACCGAG
CACACAGCTCGTTGTTGGGAGCATGGAAACTGTGTGGCCAGCTTGGTTCA
GGCCAAGTGCCATTGCCAGCCGGGTTGGATGGGTCCTGGCTGTAATGTAC
CCACCATTCCGACGACTTTCAAGGCCCAGAGCTATGTGAAATTCGCCCTC
AGCTTTGAGCCCGACAGATTTTCCACCCAGTTGCAGCTGAGATTTCGAAC
TCGAGAGCAGGGAGGCGAACTTTTCCGGGTTAGTGATCAACACCACAGGG
AGTACGCCATACTGGAACTTCGAAGAGGCCACCTGCAGTTCCGCTATAAT
CTGAACTCCATGAGAAACGAGGAGCAGCTGCTCACCCTAACCGCAATCGC
AGTGAACGATGGCCAATGGCATGTGATTCGCATTAGTCGATATGGATCGG
CAGCTCTAATGGAACTGGATGGCGGGGAGTCGCGGCGCTACAACGAGTCC
TTTCACTTCACAGGGCATCAGTGGCTGACCATCGACAAGCAGGAGGGTGT
TTATGCGGGCGGCAAGGCCGAGTATACGGGAATCAAGACCTTTGAGGTGC
AGTCCGATTTCCAGAGAAGCTGCTTGGACGACATCAGGCTGGATGGAAAG
CACTTGCCCCTGCCGCCCGCCATGAATGGCACCCAATGGGGCCAGGCGAC
GATGGCCCGCAACCTGGAGCGCAACTGCCCCTCGAACAGGCCGTGCTCGA
ATGTCATCTGTCCCGATCCCTTTGACTGCGTCGACTTGTGGAACGAATAC
GAGTGCACTTGCAGCGAGGGTCGCATCATGTCCTCGGACACCAAGGGATG
TGTGGACCGCAACGAGTGCCTGGACCTGCCATGTCTGAACGGAGCCACCT
GCATCAATCTGGAGCCCCGGCTGCGGTACCGATGCATTTGCCCGGAGGGC
TACTGGGGCGAAAACTGCGAGCTGGTGCAGGAGGGACAGCGCCTGAAGCT
GAGCATGGGCGCCCTGGGGGCCATATTCGTTTGCCTGATTATCATACTGA
TTCTCGCACTGATCTTCGTGCTATATAGTCGCAAACGCAAGACGACCAAG
AAGAAGAAGCGCTCCGGACCCGAGAAGGATGTCCGCGAGACGGTCATCAG
CTACGAGGACGAGGGTGGCGGCGAGGACGACATGACGGCCTTCGACATTA
CGCCACTGCAAATACCAATCAGCGCACAGGGAGGACCGCCGGACATCGCC
GCCTGCAAGATGCCCATAATCTATCCCGTGATGACGCTGCTGCCACCTGG
CCAGGAACTGAACGTGGCCTATCTGATGGAGGAACGGAAGCAGCGCATCG
ACAAGGACAACAACGCACCGCCCTTCGACGACCTGCGGAACTTCACCTTC
GAGGGCAGCGGCAGCATCGCCGAGTCACTGAGTTCGCTAGCCTCCGGCAC
CGATGATGAGAATCAAGACTTTAACTATCTACAGAACTGGGGTCCACGTT
TCAATGCCCTGGCCGCCATGTACGTGCACGATAAGGCGAAAGCCAGCAGC
CAGCTGCCGTCGGATGGCGGAGGAGGATCTGGAGATGGACCTGGACCTGG
AGCCTCATCATCATCGCCGTTGGGAGGCGGTGGCACGGGAGGTGGATCTG
GGATTCCAGGCAATGTCCTTGCCGTCGTCGCAACGGGAAGTGGAGCAGGT
CCTGGAGGCGGCGGTGGTAGCAGTGGGTTGATGCCACTGCCCGAGGTCGA
CAAAGTTGTATTAGCAAGCTTTCTAGACCAT

BO32976.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:55:16
Subject Length Description Subject Range Query Range Score Percent Strand
CadN2-RD 5400 CG42829-PD 1..5397 17..5413 26985 100 Plus
CadN2-RC 5400 CG42829-PC 1..5397 17..5413 26985 100 Plus
CadN-RL 9306 CG7100-PL 4204..5684 74..1560 1610 74 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:55:18
Subject Length Description Subject Range Query Range Score Percent Strand
CadN2-RD 7914 CG42829-RD 1181..6577 17..5413 26985 100 Plus
CadN2-RC 7220 CG42829-RC 487..5883 17..5413 26985 100 Plus
CadN-RL 10427 CG7100-RL 4807..6287 74..1560 1610 74 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:55:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 17797347..17799673 4288..1962 11635 100 Minus
2L 23513712 2L 17801696..17802607 1962..1051 4560 100 Minus
2L 23513712 2L 17803075..17803499 1054..630 2125 100 Minus
2L 23513712 2L 17788308..17788625 5413..5096 1590 100 Minus
2L 23513712 2L 17661357..17662281 1560..630 1230 75.7 Minus
2L 23513712 2L 17794473..17794714 4700..4459 1210 100 Minus
2L 23513712 2L 17789335..17789556 4922..4701 1110 100 Minus
2L 23513712 2L 17789082..17789256 5097..4923 875 100 Minus
2L 23513712 2L 17796753..17796930 4458..4281 875 99.4 Minus
2L 23513712 2L 17809236..17809403 495..328 840 100 Minus
2L 23513712 2L 17815574..17815718 212..68 725 100 Minus
2L 23513712 2L 17806368..17806508 631..491 705 100 Minus
2L 23513712 2L 17810823..17810938 328..213 580 100 Minus
2L 23513712 2L 17655669..17655910 4700..4459 430 78.5 Minus
2L 23513712 2L 17659214..17659569 2362..2007 385 73.9 Minus
2L 23513712 2L 17827421..17827472 68..17 260 100 Minus
2L 23513712 2L 17651329..17651420 4869..4778 220 82.6 Minus
2L 23513712 2L 17666608..17666737 497..368 200 76.9 Minus
2L 23513712 2L 17657063..17657236 4458..4285 195 74.1 Minus
Blast to na_te.dros performed on 2014-11-28 11:55:15 has no hits.

BO32976.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-30 09:39:56 Download gff for BO32976.complete
Subject Subject Range Query Range Percent Splice Strand
CadN2-RC 487..5883 17..5415 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:01 Download gff for BO32976.complete
Subject Subject Range Query Range Percent Splice Strand
CadN2-RC 487..5883 17..5415 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:53:33 Download gff for BO32976.complete
Subject Subject Range Query Range Percent Splice Strand
CadN2-RC 487..5883 17..5415 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:53:33 Download gff for BO32976.complete
Subject Subject Range Query Range Percent Splice Strand
2L 17794473..17794714 4459..4700 100 <- Minus
2L 17796753..17796923 4288..4458 100 <- Minus
2L 17788306..17788624 5097..5415 99 <- Minus
2L 17789083..17789256 4923..5096 100 <- Minus
2L 17789335..17789556 4701..4922 100 <- Minus
2L 17797348..17799673 1962..4287 100 <- Minus
2L 17801697..17802605 1053..1961 100 <- Minus
2L 17803077..17803497 632..1052 100 <- Minus
2L 17806368..17806505 494..631 100 <- Minus
2L 17809238..17809402 329..493 100 <- Minus
2L 17810823..17810938 213..328 100 <- Minus
2L 17815574..17815717 69..212 100 <- Minus
2L 17827421..17827472 17..68 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:01 Download gff for BO32976.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 17788306..17788624 5097..5415 99 <- Minus
arm_2L 17789083..17789256 4923..5096 100 <- Minus
arm_2L 17789335..17789556 4701..4922 100 <- Minus
arm_2L 17794473..17794714 4459..4700 100 <- Minus
arm_2L 17796753..17796923 4288..4458 100 <- Minus
arm_2L 17797348..17799673 1962..4287 100 <- Minus
arm_2L 17801697..17802605 1053..1961 100 <- Minus
arm_2L 17803077..17803497 632..1052 100 <- Minus
arm_2L 17806368..17806505 494..631 100 <- Minus
arm_2L 17809238..17809402 329..493 100 <- Minus
arm_2L 17810823..17810938 213..328 100 <- Minus
arm_2L 17815574..17815717 69..212 100 <- Minus
arm_2L 17827421..17827472 17..68 100   Minus

BO32976.pep Sequence

Translation from 16 to 5431

> BO32976.pep
MVDPLKIFWVLTNSTYLVTKFVRIGIADKNDSPPYFDRFLYETEIDENAD
LQSTVLTVNAKDHNESTNIRYQITGGNIGNAFAVQNTTGVIYVASPLDYE
TRPRYELRLEATRNRKNNYTTVVINVRDVNDNPPVFDRQTYRTQITEEDD
RNLPKRILQVTATDGDVDRPINIVYFLTGQGIDPDNPANSKFDINRTTGD
IFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAP
QFPQGIYFGNVTENGTAGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIE
EETGAPIFEIEPETGLIKTAVCCLDRERTPDYSIQVVAMDGGGLKGTGTA
SIRVKDLNDMPPQFTKDEWVTEVDETNGTYIPETPILTVTVQDEDETNTF
QYKVVPNSGFGADKFAMVRNGDGTGSLKIIQPLDYEDPLQSSGFRFRIQV
NDKGDDGPGGSDKYHVAYSWVVVKLRDINDNVPKFDREHIEVSIYEDTKV
GTILEQFKATDADQGGHSKVAYKIVRSTNRKRQFAISDRGAVSIQRPLDR
ETQDRHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQDYKPTLPE
NVSGKKILEVAAKDPDDRLRGNGGPFTFRLDPLASDEIKAGFKVEYDRRG
DNENGVAIISSLRPFDREAQKSYAIPIEIKDNGAPAMTGTSTLTVTIGDV
NDNKMQPGSKSVLVYNYQGQSQDTPIGRVYVNDPDDWDVPDKKYYWEVQE
HQRFKLDTDTGILTMRAGTRRGRYQLRFKVYDREHGQEDIPANLSVTVRD
ITAEAVQQAGSMRLSHITDEDFVRTWNPVKNQVEPSKLERFRNKLAELLY
TDRDNVDVFSVQLKEGSPYPLTDVHFAARSATQQPYFKAVRLNGVVQMHR
EEIEKDVGLNITMVNINECLHEGKGKCGSNSCTSKVELGKKPYTVSVNRT
ALVGVRLDISAQCVCRARNFTHQDHNCRTHLCYNGGRCVETRNGPKCVAC
PVGYNGPRCQQSTRSFRGNGWAWYPPLQLCQESHLSLEFITRVADGLILY
NGPIVPPKPEETVISDFIALELEQGYPRLLIDFGSGTLELRVKTKKTLDD
GVWHRLDIFWDTENVRMVVDFCRTALVSEMEDGTPPEFDDNACQARGQIP
PFAESLNLNQPLQLGGLYRQHFDQTLYNWQYAFSSKGFDGCIRNVIHNSE
HYDLAFPALARNSFPACPQTDEVCLKTEHTARCWEHGNCVASLVQAKCHC
QPGWMGPGCNVPTIPTTFKAQSYVKFALSFEPDRFSTQLQLRFRTREQGG
ELFRVSDQHHREYAILELRRGHLQFRYNLNSMRNEEQLLTLTAIAVNDGQ
WHVIRISRYGSAALMELDGGESRRYNESFHFTGHQWLTIDKQEGVYAGGK
AEYTGIKTFEVQSDFQRSCLDDIRLDGKHLPLPPAMNGTQWGQATMARNL
ERNCPSNRPCSNVICPDPFDCVDLWNEYECTCSEGRIMSSDTKGCVDRNE
CLDLPCLNGATCINLEPRLRYRCICPEGYWGENCELVQEGQRLKLSMGAL
GAIFVCLIIILILALIFVLYSRKRKTTKKKKRSGPEKDVRETVISYEDEG
GGEDDMTAFDITPLQIPISAQGGPPDIAACKMPIIYPVMTLLPPGQELNV
AYLMEERKQRIDKDNNAPPFDDLRNFTFEGSGSIAESLSSLASGTDDENQ
DFNYLQNWGPRFNALAAMYVHDKAKASSQLPSDGGGGSGDGPGPGASSSS
PLGGGGTGGGSGIPGNVLAVVATGSGAGPGGGGGSSGLMPLPEVDKVVLA
SFLDH

BO32976.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:17:34
Subject Length Description Subject Range Query Range Score Percent Strand
CadN2-PD 1799 CG42829-PD 1..1799 1..1799 9601 100 Plus
CadN2-PC 1799 CG42829-PC 1..1799 1..1799 9601 100 Plus
CadN-PL 3101 CG7100-PL 1394..3087 12..1719 6971 75 Plus
CadN-PD 3097 CG7100-PD 1390..3083 12..1719 6971 75 Plus
CadN-PE 3097 CG7100-PE 1390..3083 12..1719 6971 75 Plus
CadN-PD 3097 CG7100-PD 1066..1794 24..760 515 27.5 Plus
CadN-PL 3101 CG7100-PL 844..1631 22..805 514 26.7 Plus
CadN-PL 3101 CG7100-PL 649..1385 34..782 510 26.5 Plus
CadN-PD 3097 CG7100-PD 649..1381 34..782 509 26.4 Plus
CadN-PL 3101 CG7100-PL 1066..1798 24..760 507 27.2 Plus
CadN-PD 3097 CG7100-PD 844..1627 22..805 501 26.5 Plus
CadN-PD 3097 CG7100-PD 508..1200 8..727 446 25.9 Plus
CadN-PL 3101 CG7100-PL 508..1191 8..712 433 25.8 Plus