BO32980.complete Sequence
1690 bp assembled on 2012-07-30
GenBank Submission: KX793835
> BO32980.complete
GAAGTTATCAGTCGACATGGGACGCCGCTCCATAAACACCACGAAGAGTG
GAAAGTACATGAATCCCACGGACCAGGCGCGCAAGGAGGCCCGCAAGAAG
GAGCTCAAGAAGAACAAGAAACAGCGCCAAATGGTGCGGGCCGCCGTTTT
GAAGAACAAGGATCCTTCACAGATACTTGAGGAGATGGAGAAGATCGACG
AGATGGAGTACAACGTTCTGCAACCATCGCCGCTGAACGAGAAGGTGCTG
CGCGACAAGCGCAAAAAGCTGAAGGAAACATTCGACCGCGTAATGCGACT
CTATCACAATGACGAGCCGGAGCACTGGGCGGACCTCAAGCGCAAGGAGG
TGGAGTATGAGAAGAAGCGCCTGAAGAAGCAGCAGTACTACGAAAGCGTT
AAGCACGCCCAGAGCGTCCAGATTGACGAAATTCCACTGCCCGCTCCGGT
GTCTGCCGTGTCAGGCGGTTCTACCGAAACGACTGGCGGATCGGTGGTTG
CGGGATTCGGCGCATCCGTTGTCATACGCCTTCCCCCACCGCCCATGACA
ATGGCACTGCCGCCTTATGCTCCAGGCGCTCCACCAGGCGTGTCCAGAAA
TAGCGATTTAGCCAGCGAGGCGCAAGTGGAGAAATCGAAGGAGAACGAGC
AAAAGGATTGGCTGGGTGTCCCGCCGGGACCGCCGCCAGATCTGTTTGCC
TTTTCCGAACTCAATTCCGATGCCGAGGGAAATACTGACTACGATGGTGA
GGGCGAGGAGGAGGAGCCAGAGCCATTGAAGAAGGGCAAGGATAAAGAGA
AGGACAAGAACAGCGAGGCCACCGAGCCAAATAACCAAAATATCGACGAC
TTCATGAAGGAAATGGAGCATGTGCACAAGCGTAAGCATCGAAAACTGGC
GGCTAAAGAGGACGAGGCCGACAAAAAGCGGGAGGAGGACGATGGGAAAG
ATATAGATAAGATAGAGGAACGAACATCTGACTCCGATAAGAGAACCGCC
AGCAGTACGGACGATGAGGACGACGATGACCAGGATGAGGATGAAAATAT
GCCCGAAGTGCCGACCAAGCCAGCATCAGTCAAATCATCTACAGCGACAC
CCGCGCCAGCTCCTCCGACAGCGCCCACATTGCCGACTATTCCGCTGCCA
CCAGCGTCGTCTGTGCCTGCGCCGCCACAGCTGCCACACCTACCGCCAAT
TCCTAATCTTGGGCCACCTGGCATAATGTACCGACCTCCACCCATGCGAC
CTCCTCACCCGGGTTCCGGCTTTGGCATACGCATGCCACCTGGACCGCCG
CCAGGACCCAGGGCACCGCATGGCCTGGGACCAATACCGCGCATGGGCAT
CAGGATGCCACCAGGACCGCCGCCAGGTCTGCCTCCGCGCCTTGCGCACC
ACAATAAGCAGGGAGGCGGCGCAGGTGCACCAAAGGAGTCAGCCAAGGGT
GTGGCCACTATTACAGCCAAGCCACAAATCAGGAATCTGAGTGCGGATGT
CACCCGCTTTGTACCGTCCACGTTGCGAGTGAAGCGCGAGGATCAGCGAC
GCACGGCGAGGCCCAGGCATGCGGCCAACGATGGACACCACGCCCACTCC
GAGGCGCACAGCAAGCCGCCCACCAAGGATGACGCCTATCTGCAGTTCAT
GAACGAGATGCAGGGCTTGCTGGCAAGCTTTCTAGACCAT
BO32980.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:55:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2685-RA | 1659 | CG2685-PA | 1..1656 | 17..1672 | 8280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:55:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2685-RA | 1952 | CG2685-RA | 220..1875 | 17..1672 | 8280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:55:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2712092..2713270 | 1483..305 | 5895 | 100 | Minus |
| X | 23542271 | X | 2711833..2712024 | 1672..1481 | 960 | 100 | Minus |
| X | 23542271 | X | 2713496..2713621 | 206..81 | 630 | 100 | Minus |
| X | 23542271 | X | 2713334..2713432 | 304..206 | 495 | 100 | Minus |
| X | 23542271 | X | 2713673..2713741 | 85..17 | 330 | 98.6 | Minus |
Blast to na_te.dros performed 2014-11-28 11:55:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| frogger | 2483 | frogger FROGGER 2483bp | 1937..1982 | 1040..998 | 123 | 80.4 | Minus |
BO32980.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-30 09:39:57 Download gff for
BO32980.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2685-RA | 217..1872 | 17..1674 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:03 Download gff for
BO32980.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2685-RA | 220..1875 | 17..1674 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:53:35 Download gff for
BO32980.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2685-RA | 220..1875 | 17..1674 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:53:35 Download gff for
BO32980.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2711829..2712022 | 1483..1674 | 98 | <- | Minus |
| X | 2712093..2713270 | 305..1482 | 100 | <- | Minus |
| X | 2713334..2713431 | 207..304 | 100 | <- | Minus |
| X | 2713496..2713621 | 81..206 | 100 | <- | Minus |
| X | 2713678..2713741 | 17..80 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:03 Download gff for
BO32980.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2605862..2606055 | 1483..1674 | 98 | <- | Minus |
| arm_X | 2606126..2607303 | 305..1482 | 100 | <- | Minus |
| arm_X | 2607367..2607464 | 207..304 | 100 | <- | Minus |
| arm_X | 2607529..2607654 | 81..206 | 100 | <- | Minus |
| arm_X | 2607711..2607774 | 17..80 | 100 | | Minus |
BO32980.pep Sequence
Translation from 16 to 1690
> BO32980.pep
MGRRSINTTKSGKYMNPTDQARKEARKKELKKNKKQRQMVRAAVLKNKDP
SQILEEMEKIDEMEYNVLQPSPLNEKVLRDKRKKLKETFDRVMRLYHNDE
PEHWADLKRKEVEYEKKRLKKQQYYESVKHAQSVQIDEIPLPAPVSAVSG
GSTETTGGSVVAGFGASVVIRLPPPPMTMALPPYAPGAPPGVSRNSDLAS
EAQVEKSKENEQKDWLGVPPGPPPDLFAFSELNSDAEGNTDYDGEGEEEE
PEPLKKGKDKEKDKNSEATEPNNQNIDDFMKEMEHVHKRKHRKLAAKEDE
ADKKREEDDGKDIDKIEERTSDSDKRTASSTDDEDDDDQDEDENMPEVPT
KPASVKSSTATPAPAPPTAPTLPTIPLPPASSVPAPPQLPHLPPIPNLGP
PGIMYRPPPMRPPHPGSGFGIRMPPGPPPGPRAPHGLGPIPRMGIRMPPG
PPPGLPPRLAHHNKQGGGAGAPKESAKGVATITAKPQIRNLSADVTRFVP
STLRVKREDQRRTARPRHAANDGHHAHSEAHSKPPTKDDAYLQFMNEMQG
LLASFLDH
BO32980.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:17:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2685-PA | 552 | CG2685-PA | 1..552 | 1..552 | 2942 | 100 | Plus |
| dalao-PA | 749 | CG7055-PA | 488..656 | 346..535 | 167 | 30.6 | Plus |
| CG15021-PA | 420 | CG15021-PA | 282..397 | 341..454 | 158 | 38.5 | Plus |
| CG15021-PA | 420 | CG15021-PA | 135..292 | 346..486 | 156 | 33.8 | Plus |
