BO32985.complete Sequence
3175 bp assembled on 2012-07-30
GenBank Submission: KX797429
> BO32985.complete
GAAGTTATCAGTCGACATGCACGCCGCATCTTTGACGACGGTGGAGGGAC
TGCTGCAGGAGTTTTATCAGCCCAGCACCTCCAATGCCCGGAAACGAGAG
ATCGAGACAAACCTCTTGGCCTTCAAGTCCCAGCCAGAGGCGTGGCAACT
TTGCCTCCGTGTGGCCACCTCTTCCGACACCACGGAGAATCAGTTCCTCT
GGTTCTTCAGCACCTCAACCTTGGAGCACACAATCACGCGGAGATGGACA
CAGTTGACGTCCACGGACAAGACTTTGCTGCGGGAGACCCTTTGGAACTC
GTATGCCCAACTGGTAGCCACTCCAAATGTGGCCAAACGGCACAGGGACA
CACTGGCCCAGTTGATAGCCCTACTCGGAAAGAGGGAGTTCCCTGAACAG
GACCCCAATTACATGCAACACTGCATGGAACTGACAAAAACACGGTTTCA
ACTTGGCATCAACCTGCTTAAGATCACCTCCGAGGAGGTGGTAAGCAACA
GGGGCGACCTGACCACCGAATGGAAGCAGTACTTCTACTCCTGCATCTCC
ATGTGTGTACCCGATGTTCTGGACCTGGTAACCAAGTATCTGCTAATCGC
TGTATGCCACATCAATGGCAAAGACATCCAAACAACCATACCAAACACCC
TCATGGACTTTAGTCTAACCTCAGCGCTGCCAAATGACAATCAATTAAGT
TCCTCAATTTTGGACCTGCTAGGATGTGTGCAGCACTTGGTCTCCTGGAT
ACGCACTGAACTGATCTCGGAGTACTTCCTTATGAGCATACTTGACCTTT
CCCAGTGGCGACCAGCCCATGAGCCCATCTCCTTGGCGGCTCTCTCTGTG
TTGAATGAGCTCCTCTACCTCCAGAAGCCACTGCCCTTCCCAGGACCCTT
GATGGGCGGCGTTACCAGCCTCCTGGAGCAGCACAATAACAATCGGCGGC
AGAGCGAGATGTACAGCGACAAGTTTCGGGAGCTGCTGCGCCTCTACACC
ACCAAGTATGCCGCCAAGCTGATGCAGGAGCCAGACCTGCTGGAGACCTT
TCTCAATCTGCTATACAGCTGCACCACTGAATTACACGGCGCCTTGGACT
TCACCGAAAAGCTTGAGATCTGGACACCCATCATCAAAGGCATTGCCCAG
CACCCCGCCAAAATCACGCGTTATAACAATGTGCTTACCCAGCTAGTAGA
TGAGATTATGAGGCGCACTCAGTTTGAGGCCAACAAACCCGAGCTAGAAG
TGCTGGACAACGAGCTCATGGAGGACGATACCTCCGCCACTGAGTGGCAG
CAGTTTCTAGACCAATGCTTCGAGTCCCTGGCCCTACTGGCCAACACCAG
AGGTGCACACATCGTTTTCGCACAGGTCTATAACCACTGGTCACGGCCAC
AGATGTATTTACTGTCCTTGGAGCACGCATTGGACCACGGAAGCGCTCGA
AGCTACGAAGCGGCACGTAAACTGAAGGGCGCCAATGTGGGCGAGATTTT
GCGCGACTTTGCCACCGTCTGCCAGGCGGTCGTGCGTTTGGCCCCATTGA
TGGACTCATCAACAGCAGCACCCGGGGTTGCTGATGAGATGGAGTGCCAG
CTGCAGATGCTGTCCGACAGTTTGCTGCAGACTCTACAGCTCCTCGCAAG
CAATCGTTTGTATAGCGGCGGCAGCGAAATGGACAAAGCTACTTTCCAGA
CTGATTTGGACAACCTATACGCTCAAGTTCTACTGGCCATGAGGAGCATC
TTTCCGCTAACGAAAGCCATGAGCGGCGAGGAACTGCTGCACCGCCTGTT
TGCTATCCTGGGCAGCATTTTCGCATGCAATGGATCCTTAACGGCTGCCT
CCCCCATTGTGCAGCAGGCGGCAAGCGAGCTGCTGCTTTTCATATCGACT
GTGATACGGCCCAAGTGCCTGCTGGATATACCACAAATCCAAAGCCTGCT
GCAGGCAGGCTCTCGCTTGGGCGCCCAATTGCCGCGTCAGGTGTGCATCA
ATGTACACATCAGTCTGGTCAGCTACATGGTGCTGCCGTGGAAAAGCGTT
CCGGAGCAGCAGCAGGAGTATCCGAGGCGTCTCTGGATGCTGCGTGAATA
TGTCCAGGGGCTGGCACAGAACTTTCTGGATCTGGACTTAGGCCAGGCCA
ACGAGAGCAAGGTGGCGGCCACCACGCTCAGTTTGCTGGGTACTTTCACT
GCTCTCATTGAGTATTTTAAAGCTACTGGAGGCAATGCCAAGGATATGCT
GGCAAGCACTTTCAAGCCTATTTTAACAAAGGCCCTAATGATTTTTAACA
ACTTTGGGCAAAGCAGCATCGCCATGGCCATCACGGTGGCCGAGTTTAGC
CTGAGCATGCTCCGAACATTGCCCACCCATTTGGGGGCCCAGTTCATTAA
GGAAATGATCACCTTGTTCATAAGTGTCAGCAGTAGGGAGCAACTGACTC
TGAGCCGACTGGCTGTGATGGAAAAAATACTGCAGATGTTCAAGTTGATC
GTGGAGCAGCCAGGGAGCGCCTCCTTGGGGCTGCTTCCCTCCATTTTAGA
TTTTAGCACTCAGCAGATTCTGCCCTTGTTGCAGCAGCAAAATGCGGCAA
CCGATAACAGCGAGATCACTAGCCTGTTGTACGCTTTGTTTGATAGTGTC
CTCACCTGCAAGTGGCAGTTCTTCTACAAAAATCAGCTCTCCAATGGTCA
CAGCGGTGGTGGCTCCGGCAACTTCAACTGCAGCGACAACCTGCATCCAG
CACACTTCATGGCCATCCTGAATGCGTATGGCCAGATGCTGGTCAGTGGG
ACTGATCCGAGCAATGTGCGCAGCGTTCTCTTCTCAATGCAAAATGTGAA
TGAGAGGAGTCGGTTGTACCAACGCGCCTTGTTCAAGGAGCAACTGCTGG
CTTCATTTCAGCGGGCCTTGCTCAATCTGCTGTTGAGTGGAGAGGGCTCC
CTCCACTTCGACATGATTGCCCAGGCGTTGTATGCTATGGGCCAGGTGGA
CCGACGCCAGTTGCTCGAGAGCTTCGTTCACGCCTCTTTGCCAGTGGCTC
AGACGTCGCTGGAGGAGATCTGCCAGACAAATGACATTCCAACGTTTACG
CAGAAACTCACGCAGCTCATGCAGGACGCCCACTGCGTGCACCTTAATGA
GACGGCGGCAAGCTTTCTAGACCAT
BO32985.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:55:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ebo-RA | 3144 | CG3923-PA | 1..3141 | 17..3157 | 15690 | 100 | Plus |
| ebo-RB | 3162 | CG3923-PB | 1..3159 | 17..3157 | 15475 | 99.4 | Plus |
| ebo-RC | 3165 | CG3923-PC | 1..3162 | 17..3157 | 15445 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:55:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ebo-RA | 4142 | CG3923-RA | 184..3324 | 17..3157 | 15690 | 100 | Plus |
| ebo-RB | 4160 | CG3923-RB | 184..3342 | 17..3157 | 15475 | 99.4 | Plus |
| ebo-RC | 4163 | CG3923-RC | 184..3345 | 17..3157 | 15445 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:55:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 473156..473705 | 2266..1717 | 2750 | 100 | Minus |
| X | 23542271 | X | 475769..476293 | 543..19 | 2625 | 100 | Minus |
| X | 23542271 | X | 472125..472564 | 3083..2644 | 2200 | 100 | Minus |
| X | 23542271 | X | 473764..474200 | 1716..1280 | 2185 | 100 | Minus |
| X | 23542271 | X | 474698..475082 | 1082..698 | 1925 | 100 | Minus |
| X | 23542271 | X | 472642..472853 | 2646..2435 | 1060 | 100 | Minus |
| X | 23542271 | X | 474310..474506 | 1279..1083 | 985 | 100 | Minus |
| X | 23542271 | X | 472919..473096 | 2437..2260 | 875 | 99.4 | Minus |
| X | 23542271 | X | 475158..475314 | 699..543 | 785 | 100 | Minus |
| X | 23542271 | X | 471837..471911 | 3157..3083 | 360 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:55:25 has no hits.
BO32985.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-30 09:39:57 Download gff for
BO32985.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Exp6-RA | 197..3337 | 17..3159 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:05 Download gff for
BO32985.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Exp6-RA | 184..3324 | 17..3159 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:53:38 Download gff for
BO32985.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ebo-RA | 184..3324 | 17..3159 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:53:38 Download gff for
BO32985.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 471835..471911 | 3083..3159 | 96 | <- | Minus |
| X | 472126..472561 | 2647..3082 | 100 | <- | Minus |
| X | 472642..472851 | 2437..2646 | 100 | <- | Minus |
| X | 472920..473089 | 2267..2436 | 100 | <- | Minus |
| X | 473156..473705 | 1717..2266 | 100 | <- | Minus |
| X | 473764..474200 | 1280..1716 | 100 | <- | Minus |
| X | 474310..474506 | 1083..1279 | 100 | <- | Minus |
| X | 474698..475080 | 700..1082 | 100 | <- | Minus |
| X | 475158..475313 | 544..699 | 100 | <- | Minus |
| X | 475769..476294 | 17..543 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:05 Download gff for
BO32985.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 366675..366884 | 2437..2646 | 100 | <- | Minus |
| arm_X | 366953..367122 | 2267..2436 | 100 | <- | Minus |
| arm_X | 365868..365944 | 3083..3159 | 96 | <- | Minus |
| arm_X | 366159..366594 | 2647..3082 | 100 | <- | Minus |
| arm_X | 367189..367738 | 1717..2266 | 100 | <- | Minus |
| arm_X | 367797..368233 | 1280..1716 | 100 | <- | Minus |
| arm_X | 368343..368539 | 1083..1279 | 100 | <- | Minus |
| arm_X | 368731..369113 | 700..1082 | 100 | <- | Minus |
| arm_X | 369191..369346 | 544..699 | 100 | <- | Minus |
| arm_X | 369802..370327 | 17..543 | 99 | | Minus |
BO32985.pep Sequence
Translation from 16 to 3175
> BO32985.pep
MHAASLTTVEGLLQEFYQPSTSNARKREIETNLLAFKSQPEAWQLCLRVA
TSSDTTENQFLWFFSTSTLEHTITRRWTQLTSTDKTLLRETLWNSYAQLV
ATPNVAKRHRDTLAQLIALLGKREFPEQDPNYMQHCMELTKTRFQLGINL
LKITSEEVVSNRGDLTTEWKQYFYSCISMCVPDVLDLVTKYLLIAVCHIN
GKDIQTTIPNTLMDFSLTSALPNDNQLSSSILDLLGCVQHLVSWIRTELI
SEYFLMSILDLSQWRPAHEPISLAALSVLNELLYLQKPLPFPGPLMGGVT
SLLEQHNNNRRQSEMYSDKFRELLRLYTTKYAAKLMQEPDLLETFLNLLY
SCTTELHGALDFTEKLEIWTPIIKGIAQHPAKITRYNNVLTQLVDEIMRR
TQFEANKPELEVLDNELMEDDTSATEWQQFLDQCFESLALLANTRGAHIV
FAQVYNHWSRPQMYLLSLEHALDHGSARSYEAARKLKGANVGEILRDFAT
VCQAVVRLAPLMDSSTAAPGVADEMECQLQMLSDSLLQTLQLLASNRLYS
GGSEMDKATFQTDLDNLYAQVLLAMRSIFPLTKAMSGEELLHRLFAILGS
IFACNGSLTAASPIVQQAASELLLFISTVIRPKCLLDIPQIQSLLQAGSR
LGAQLPRQVCINVHISLVSYMVLPWKSVPEQQQEYPRRLWMLREYVQGLA
QNFLDLDLGQANESKVAATTLSLLGTFTALIEYFKATGGNAKDMLASTFK
PILTKALMIFNNFGQSSIAMAITVAEFSLSMLRTLPTHLGAQFIKEMITL
FISVSSREQLTLSRLAVMEKILQMFKLIVEQPGSASLGLLPSILDFSTQQ
ILPLLQQQNAATDNSEITSLLYALFDSVLTCKWQFFYKNQLSNGHSGGGS
GNFNCSDNLHPAHFMAILNAYGQMLVSGTDPSNVRSVLFSMQNVNERSRL
YQRALFKEQLLASFQRALLNLLLSGEGSLHFDMIAQALYAMGQVDRRQLL
ESFVHASLPVAQTSLEEICQTNDIPTFTQKLTQLMQDAHCVHLNETAASF
LDH
BO32985.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:17:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ebo-PA | 1047 | CG3923-PA | 1..1047 | 1..1047 | 5329 | 100 | Plus |
| ebo-PB | 1053 | CG3923-PB | 1..1053 | 1..1047 | 5312 | 99.4 | Plus |
| ebo-PC | 1054 | CG3923-PC | 1..1054 | 1..1047 | 5311 | 99.3 | Plus |
