BO32988.complete Sequence
3829 bp assembled on 2012-10-15
GenBank Submission: KX794229
> BO32988.complete
GAAGTTATCAGTCGACATGTCGTCACTCAAGGTCGCCGTAAGGGTTCGAC
CCTTCAACTCCCGCGAGATCGACATGGACGCGCAGCTCATCATGGAGATG
GAGAACAAGAAGACGCGTCTGCTGAAGCCACGTTTGCAGTCCATTCGCGA
TGCCGGGCGGGACAATCATCACGACTTCACCTTCGACTACTCCTATTGGT
CATTCGATGCGGAGGATCCGCACTTCGCCACCCAGGAGCAGGTTTACAGC
GATCTGGGCAATGATGTCGTGGATTGCGCCTACGAAGGATACAATGCGTG
TGTTTTTGCCTACGGACAGACTGGCTCTGGCAAGACCTTCACCATGATGG
GCACGCCAAACAATCCCGGCCTAATACCGCGCATCTGCGAGGAGCTCTTT
GCCCGCATGCGTGTGGGCCAGGAGTCGGGCACTGGCTACAGGACGCATGC
CAGCTATCTGGAGATCTACAACGAACGGGTCAAGGATCTGCTGGCGGCAC
AGAGCACTGGGCATGGGCTAAGGGTGCGGGAGCATCGCAGCCTGGGTCCC
TATGTGGAAAACCTGTCACAGCATGCTGTCTCTGATTTCGATGAGATTCA
GGAATGCATTGCAAGGGGAAATGCGCAACGCACCACGGCCAGCACCAACA
TGAACGATACGAGCAGCCGCAGTCACGCCATCTTCACGATCACATTTGTG
CAGGCTGTCTTCATGAATGACATGCCAAGCGAGACAGTCTCGAAGATCCA
TTTGGTCGATTTGGCAGGCAGTGAGCGTGCCAATGCAACGGGAGCAACGG
GTCAGCGGCTGAAGGAGGGCGCTCACATCAACAAATCGCTCGTGACTCTG
GGTAGCGTGATCTCGGCTTTGGCGGAGCAAACGGGTGGCGGTCACAACAG
CAGCAGCTCCGCACTAGCCACCACACCGAATGGGGCGAGTAAGCGGGTGC
TCTACATTCCCTATCGCGACTCCATACTCACGTGGCTGCTCAAGGACAGT
TTGGGTGGCAATAGCAAGACCATTATGATTGCCGCTCTTTCGCCGGCCGA
TTGCAACTACAGTGAAACACTCAGCACGCTGCGGTACGCGAATCGGGCGA
AGAACATCATCAACAAGCCGACGGTCAACGAGGACACCAATGTCAAGCTG
ATCCGTGAGCTCAGGGAGGAGATCAATAAGCTGAAGTCCATGCTGGCGGG
CGATATTCACTCGCTGCAGCCATCGCTCAAAGTATTGGCCGATCTGCAAA
AGAAGGAGGCCCAAGAGAAAGTACTCACCGAGGAATGGACGGAGAAATGG
AAGGTGGCCCAGTCCATTCTGCAGGAGCAAAAGAGTCTGGGTCTGCGTAA
GTCGGGTGTCGGCGTGGTATTGGACTCAGAGATGCCGCATCTGATTGGCA
TCCACAATGACGTGACCACCGGAGTGACCCTGTACAGCCTGAAGGAGGGC
GAGACGCGAATTGGCAGTGAGGATGCAGACGTAGCCCAGGACATCGAGTT
GGCCGGCGATGGCATTAGGGCGCAACACTGCAGTATTTTCCTAAAGGGTG
GTGTGGTCACCCTGCATCCCTGGCCCTTGGCCCAGTGCTGGGTGAACGCC
CATCTTATTGACGAACCCAAGCAAATTTCGCAGGGCGATATCATATTGCT
GGGCCGTACGAACATCTTCCGTTTTAACAATCCCGCCGAAGCTGCAAAAC
TGAGAAAGGATTTGAGTCGGTCGCAGTTGGACATGTCGCGGCTTTCGCTG
ATCACTTCGTCCAAGGAGAATTTGCTCACATGCAGCATATACTCGGATGA
AGATGGAGCATCGCCATACAAGCGTCCAGAGCGACAGTATTATCCCCAGC
GTCCCATGTCGCGTGACGATCCGGAATTGCAGGACGAGAATAGAAAAATC
CTTGATACCATTGAGAATGCCCTTAAGCAGCTCAATGTGGAACGCGTCCA
GATGCACGACCAATACAAGACCAAAGTGCGCAAGCTGACCGAAGAACTCA
TTCGCCTTGAACAGGAGGAGATGGACGGCTTGCAGTTGCTGAATTGCCGT
GAACAGGAGCTGATCGCGCGCAAGGACATGCTGCTGTGGGAAAAGAACAA
TGAGAAGGTTCAGATCGACATTGTGTGTAGACAAATTTCAGCGTTTCAGA
CGCAGCTCGACTCTAAGAAACGAGATTTCTCTGAGTATGTAGCAAAAGAA
TTGCAGGAACTGCAAGATTGTGGCAAACTGGATGAGATGGGAATGAAGAT
CGAAGAGGGCACTCCTCTGAATGATGAACTGCTGTTGCAGGTATCGGATT
CCCTGGATTTGTTTGCAGCGCAGTTTATAAAGGACACTGTGCGTAGAAAT
AATGAGGAAATACGGAAACTGGACGAGCAAATAGCCGAAAAGGAAAGAAT
ACTCAATGCCAGCACTACAAAAATAGCTAAGGTCGATGAGACCATGCTGG
AGATCCAGGCCCAGCTGGAGCGCCTGCGTCTGGAACGCGCCGAAAGCGAG
GCTGAGTCTCAGGCGATGCGCGCTAAGAAGCAGAACATGAAACTGCAGTT
GGGCAACAAGTCGATGTCCACCTCGACCAGCACTAACGAGGCTGACGATG
TGTCCAAGTCGGATACGTATGAAACCTGTGATACCTTCCATACCGCTCAG
TCCAACTTATCGCTGGTTTCATCGCCCACTATTACGGAAGGCCAGCAGTC
GCCGCTAAGCAATTGTTCCTGCGATGCGGAGGATGAGGCCGAGGACACGC
GAAAAGATGACCTTTCCGGCAGCAGCGAGGAGACTTCACGAACCTGTACC
GCTGGTCCCAGCAGTGGCAGTGGTAGTGGGAGTGTAGGCATTGGTGGTTC
GGGATCCGCGCCCAGCTGCACACCCAGTTCGCAGGCTATCATGAGTGACA
GCGGTGTTTGCCTGGACAGTCGTAATCAGGCCATTCTCCAGAATGGCCAC
CTAAACAATTACAAGCAGGCAGTGCGCACCAGCGACGAAGACACCGGTTC
ATGCTCGTCCTGCGAGCTGGGACGGCACTCAGATGTTGCTCGTCCGTATT
GTCCACTGCACTCGCTGCGACGCAAGATTGCTGCCCAGAAGGCACTGATC
ATGAAGAACCTAGAAACGGACTTGAACAAGGCACAGTTGGATGAGCATAT
TGCCGATCTGCAGGATCTGCAGCGACGGTATATACAAATGGAGCAGGAGA
TGCTGCAATCGGTGCAGGATCTGGAGGCGCACGCCCAGTGTTGTGCTGAC
GAGCGTTCCGGCATGGAACGGCAATATGAACTGGCCAGCTCTATTATGCG
TTCGAGTGTCATGAGTCCCACCAGCATGGAGGAGTCCACTTCGCAGATAT
ATTCACCCAGCATGACAAGATCCTGCCCATCTATGCGCGAATTTCCTGAA
GGCGAACACTTTATTACCATACCGAGTTTTGTGATGCGGGGCGCCGGCAA
GCAAACGCACTACGAATACGAGGTTCGCATCGCTCTACCCGATGGCAAGT
TAAACATTCTGCGTCGATACAGTCGCTTCAGGGAACTGCACCTGTGCATG
AAACACTGCTACGGGGCCAAGATATCTGCACTACCCTTTCCGCGGAGAGA
GCTCTTCGCCTCGAACAGCGAGCCGGTGGCGAAGCATCGTCGTCGCCTTC
TAGAGCTCTATTTACGACGCCTATTCGTCGTGTGCTCGAAGATTCCGCAG
TGCCCAATCTACGAGGGACCCGGCGGAACGGGCCTCACACGCGCCTCCCT
CGTCCAGCTGTCGTCTTTTTTCAAGAAGGGCCTGTTCGAGAACGGCAAAC
ACGGGACGGGAGCAAGCTTTCTAGACCAT
BO32988.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:36:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Klp98A-RA | 3798 | CG5658-PA | 1..3795 | 17..3811 | 18975 | 100 | Plus |
Klp98A-RB | 3675 | CG5658-PB | 1..2099 | 17..2115 | 10495 | 100 | Plus |
Klp98A-RB | 3675 | CG5658-PB | 2096..3672 | 2235..3811 | 7885 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:36:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Klp98A-RA | 5530 | CG5658-RA | 769..4568 | 12..3811 | 18985 | 100 | Plus |
Klp98A-RB | 5407 | CG5658-RB | 769..2872 | 12..2115 | 10505 | 100 | Plus |
Klp98A-RB | 5407 | CG5658-RB | 2869..4445 | 2235..3811 | 7885 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:36:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27549269..27550313 | 3395..2351 | 5225 | 100 | Minus |
3R | 32079331 | 3R | 27551113..27551845 | 1940..1208 | 3665 | 100 | Minus |
3R | 32079331 | 3R | 27551909..27552347 | 1207..769 | 2195 | 100 | Minus |
3R | 32079331 | 3R | 27552780..27553096 | 602..286 | 1585 | 100 | Minus |
3R | 32079331 | 3R | 27548737..27548978 | 3811..3570 | 1210 | 100 | Minus |
3R | 32079331 | 3R | 27555367..27555592 | 288..63 | 1130 | 100 | Minus |
3R | 32079331 | 3R | 27549037..27549212 | 3571..3396 | 880 | 100 | Minus |
3R | 32079331 | 3R | 27550873..27551047 | 2113..1939 | 875 | 100 | Minus |
3R | 32079331 | 3R | 27552547..27552719 | 771..599 | 865 | 100 | Minus |
3R | 32079331 | 3R | 27550585..27550709 | 2236..2112 | 625 | 100 | Minus |
3R | 32079331 | 3R | 27550368..27550483 | 2350..2235 | 580 | 100 | Minus |
3R | 32079331 | 3R | 27558326..27558377 | 63..12 | 245 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:36:53 has no hits.
BO32988.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-15 10:05:06 Download gff for
BO32988.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Klp98A-RA | 769..4563 | 17..3813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:55:45 Download gff for
BO32988.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Klp98A-RA | 774..4568 | 17..3813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:07:55 Download gff for
BO32988.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Klp98A-RA | 774..4568 | 17..3813 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:07:55 Download gff for
BO32988.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27548735..27548976 | 3572..3813 | 99 | <- | Minus |
3R | 27549037..27549212 | 3396..3571 | 100 | <- | Minus |
3R | 27549269..27550313 | 2351..3395 | 100 | <- | Minus |
3R | 27550368..27550481 | 2237..2350 | 100 | <- | Minus |
3R | 27550585..27550707 | 2114..2236 | 100 | <- | Minus |
3R | 27550873..27551046 | 1940..2113 | 100 | <- | Minus |
3R | 27551114..27551845 | 1208..1939 | 100 | <- | Minus |
3R | 27551909..27552344 | 772..1207 | 100 | <- | Minus |
3R | 27552547..27552716 | 602..771 | 100 | <- | Minus |
3R | 27552781..27553094 | 288..601 | 100 | <- | Minus |
3R | 27555368..27555591 | 64..287 | 100 | <- | Minus |
3R | 27558326..27558372 | 17..63 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:55:45 Download gff for
BO32988.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 23374457..23374698 | 3572..3813 | 99 | <- | Minus |
arm_3R | 23374759..23374934 | 3396..3571 | 100 | <- | Minus |
arm_3R | 23374991..23376035 | 2351..3395 | 100 | <- | Minus |
arm_3R | 23376090..23376203 | 2237..2350 | 100 | <- | Minus |
arm_3R | 23376307..23376429 | 2114..2236 | 100 | <- | Minus |
arm_3R | 23376595..23376768 | 1940..2113 | 100 | <- | Minus |
arm_3R | 23376836..23377567 | 1208..1939 | 100 | <- | Minus |
arm_3R | 23377631..23378066 | 772..1207 | 100 | <- | Minus |
arm_3R | 23378269..23378438 | 602..771 | 100 | <- | Minus |
arm_3R | 23378503..23378816 | 288..601 | 100 | <- | Minus |
arm_3R | 23381090..23381313 | 64..287 | 100 | <- | Minus |
arm_3R | 23384048..23384094 | 17..63 | 100 | | Minus |
BO32988.pep Sequence
Translation from 16 to 3829
> BO32988.pep
MSSLKVAVRVRPFNSREIDMDAQLIMEMENKKTRLLKPRLQSIRDAGRDN
HHDFTFDYSYWSFDAEDPHFATQEQVYSDLGNDVVDCAYEGYNACVFAYG
QTGSGKTFTMMGTPNNPGLIPRICEELFARMRVGQESGTGYRTHASYLEI
YNERVKDLLAAQSTGHGLRVREHRSLGPYVENLSQHAVSDFDEIQECIAR
GNAQRTTASTNMNDTSSRSHAIFTITFVQAVFMNDMPSETVSKIHLVDLA
GSERANATGATGQRLKEGAHINKSLVTLGSVISALAEQTGGGHNSSSSAL
ATTPNGASKRVLYIPYRDSILTWLLKDSLGGNSKTIMIAALSPADCNYSE
TLSTLRYANRAKNIINKPTVNEDTNVKLIRELREEINKLKSMLAGDIHSL
QPSLKVLADLQKKEAQEKVLTEEWTEKWKVAQSILQEQKSLGLRKSGVGV
VLDSEMPHLIGIHNDVTTGVTLYSLKEGETRIGSEDADVAQDIELAGDGI
RAQHCSIFLKGGVVTLHPWPLAQCWVNAHLIDEPKQISQGDIILLGRTNI
FRFNNPAEAAKLRKDLSRSQLDMSRLSLITSSKENLLTCSIYSDEDGASP
YKRPERQYYPQRPMSRDDPELQDENRKILDTIENALKQLNVERVQMHDQY
KTKVRKLTEELIRLEQEEMDGLQLLNCREQELIARKDMLLWEKNNEKVQI
DIVCRQISAFQTQLDSKKRDFSEYVAKELQELQDCGKLDEMGMKIEEGTP
LNDELLLQVSDSLDLFAAQFIKDTVRRNNEEIRKLDEQIAEKERILNAST
TKIAKVDETMLEIQAQLERLRLERAESEAESQAMRAKKQNMKLQLGNKSM
STSTSTNEADDVSKSDTYETCDTFHTAQSNLSLVSSPTITEGQQSPLSNC
SCDAEDEAEDTRKDDLSGSSEETSRTCTAGPSSGSGSGSVGIGGSGSAPS
CTPSSQAIMSDSGVCLDSRNQAILQNGHLNNYKQAVRTSDEDTGSCSSCE
LGRHSDVARPYCPLHSLRRKIAAQKALIMKNLETDLNKAQLDEHIADLQD
LQRRYIQMEQEMLQSVQDLEAHAQCCADERSGMERQYELASSIMRSSVMS
PTSMEESTSQIYSPSMTRSCPSMREFPEGEHFITIPSFVMRGAGKQTHYE
YEVRIALPDGKLNILRRYSRFRELHLCMKHCYGAKISALPFPRRELFASN
SEPVAKHRRRLLELYLRRLFVVCSKIPQCPIYEGPGGTGLTRASLVQLSS
FFKKGLFENGKHGTGASFLDH
BO32988.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:56:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Klp98A-PA | 1265 | CG5658-PA | 1..1265 | 1..1265 | 6492 | 100 | Plus |
Klp98A-PB | 1224 | CG5658-PB | 1..1224 | 1..1265 | 6231 | 96.8 | Plus |
unc-104-PI | 1661 | CG8566-PI | 1..665 | 1..670 | 1261 | 41.7 | Plus |
unc-104-PC | 1670 | CG8566-PC | 1..665 | 1..670 | 1261 | 41.7 | Plus |
unc-104-PB | 1670 | CG8566-PB | 1..665 | 1..670 | 1261 | 41.7 | Plus |