BO32994.complete Sequence
3709 bp assembled on 2012-07-30
GenBank Submission: KX796921
> BO32994.complete
GAAGTTATCAGTCGACATGACCGAGGCAGCTGGAGCAACCAACCCAGGAG
GAGCCGCCGGAGACGCGGAATCGTACGGCAAAGAAATGGCTCTGCAGTCC
GGTAGGCCGAAAGAGCCAACCAAGTTGGACGACCTGGTGCAATATGTGAG
CCTCCATGTTCGCATACCCACGCCGTTGACCGGTGTTGTGCTGCCCTTTG
TGCCACTTTACCTGTCGGCATTCTACCTGTGGATCAACGTTACGGGTGGA
CAGGAGAATGATACCACCAATAACGATGTGATAACTGCCGATAACCAAAC
GACCACGGATAATATAACAACTTGGAATGACGTGGGATTCATCGGCGTAC
TAGCCATTGCCTTTCTGCACATTCTGACGCTGCTCTTCTGCTACTGGAGC
GTTCACGTGCTGGCCTTCCTCACTTGCCGTCGTGTAAAGCTCCCCGGCGC
CAATGTGCTGGCCAAAGTCGTACCCACTCCCAACAATGGCAACTCGAAGA
TCGTCCCCATTCGGTCCTCCAAGCTGGAGGATGGCTCAACACAGTATTAT
TTCGTTTTCCAAAAGACCAAATACGTTTGGAATGAGGATCGGAAGACATT
CCGCGCCGTCGAATTCCCGGTAAATGGACTACTGAGCACCTATTCCTCAT
CTAGAGGTTTGGAAACTGAGGAGGACATTAAGCGGGCTACTCAAACCTAC
GGAAATAACGAAATGGAAATGGTGGTTCCTGAGTTCCACGAACTTTTCAT
AGAACGCGCCACTGCGCCGTTCTTCGTGTTCCAAGTGTTCTCCGTGGGAC
TGTGGTGCATGGACGACTACTGGTACTATTCCCTGTTCACGCTTTTCATG
CTAATTGCCTTCGAGTGCACTATTGTTAAGCAGCAGCTGCGGAACATGTC
CGAGATCCGAAAAATGGGCAACAAGCCCTACCTGATATACGCCTTTCGTC
AAAACAAGTGGCGTCACCTTGGATCCGACGAGCTGCTACCCGGGGATTTG
GTGTCGATAACGCGGTCCCAAAACGACAACATAGTGCCCTGCGATCTGGT
CATTCTTCGAGGCTCTTGCATTGTGGATGAATCAATGCTCACTGGCGAAT
CAGTGCCACTAATGAAGGAGTCATTGGAATCCTTAGACAATTTGGACGTT
GAAATGGACGCCGAAGGAGATGGAAAGCTGTTTGTGCTGTTTGGTGGCAC
CAAAGTAGTCCAGCATACTGCCCCGACGAAAGAATCGCTTCGAGCTCCTG
ACGGTGGTTGCATCGGCTATGTTATCCGTACTGGATTTAACACATCCCAG
GGCAAACTACTGCGGACAATCCTGTTCGGCGCAAATCGCGCAACGGAGAA
CAATGTGGAGACCTTTGCTTTTATCGCTTTCCTTATGGTATTTGCCGTAG
CCGCAGCATCTTATGTGTGGGTTAAGGGCAGCGAAGACCCGGAGCGCAAT
CGCTACAAACTTTTCCTGGAGTGTACGCTCATCCTCACGTCCATAATTCC
GCCGGATTTGCCCATCGAGCTGACCTTGGCGGTAAACACATCACTGATCC
AGCTAACAAAGTTGTTCGTGTTCTGTACAGAACCCTTTCGGATTCCATTC
GCGGGAAAAGTGCAGATTTGCTGCTTCGACAAGACGGGGACACTGACCAC
GGATAATCTGATGGTGGAAGGTATTGCAGGATTGGCTCCCAATGGGGCTT
GTGTCCCCATTGAGAAGGCGGAGGGAAATACGGTTCAAGTGCTCGCCTGT
TGCCATTCATTGGCTCTGCTTGATGACGGATTGGTAGGAGATCCACTTGA
GAAAGCCACTCTAGCAGCTGTAGATTGGACGCTTACCAAGATGGACAGCG
TCATCCCAAAGCGACCACAGTTTAAGCCATTGAAGATCATTCAGCGCTAT
CACTTTTCATCGGCACTTAAGAGAATGTCTGTGCTAGCTGGTCATCTAAT
TCCGTACTCCAATGAGGTTAAACACATAGGAGCCGTAAAGGGAGCTCCTG
AGGTCATTCAAAAGATGCTGCGCGAGGTGCCCGCGGACTATGAGAAGGTG
TATTTGGAATACGCTCGTCGTGGAGCACGCGTACTGGCTTTGGGAATTAA
GGATCTTGGGACCCTGGGCGCTCAAAGAGTTAGGGAAATGAAGCGTGAGG
AAGTGGAGTGTGACCTGACATTCGCCGGATTCTTGATTATTTCATGTCCC
ATGAAGCCCGATTCCAAATCTGTGATCAAGGAGCTTATTCAATCCTCACA
CAAGGTGGTCATGATTACGGGCGACAGCCCGCTCACCGCCTGTCATGTGG
CCCGCGAACTGCGCTTCACCCGTAAAAAGCTGATCATTCTCACCCCGCCC
GAGGAGGATCGTAAGAACAACTGGAGCTGGGTATCTATTGACGGGGATCA
AAGCTACGAACTGGACACTAAGCCTGGTAGCAAAAAGCTTTCCCATTTGC
TAGCCACACATGATCTCTGCATTACCGGAGAGGGATTGCAGTATCTGCAA
CAGAATCAGCCGCAATATATGCGCCAACTACTGCCACAGATTACGGTCTG
TGCGAGGTTCGCACCCAAGCAAAAGGAGCTCGTAATCACACAGTTAAAGC
AGCTGGGTTACTGCACGTTGATGTGCGGCGACGGCACCAACGATGTGGGT
GCCCTTAAGCACGCCAACGTGGGCGTCTCCCTGCTGACCAGCGCTCCAGT
GAAGCGCAAACGCACCGAGGAGGAACAGCAGCAGGCGGCGGCCAATGCAG
CTGCAATAGCAGCTCAGGCACAAGCCAATGCCAATCAACAGTTGACGACC
AGGGAGCGGGCATTGCGTCGGCGCCAGGAGCATCTCAATCAGACACAGGC
TCGCCTCCAAAACGCACTCCGCGACATGGAAGAGCAAACTATGGTCAAGT
TGGGTGATGCCTCTATAGCGGCGCCATTCACCAGCAAGTCTTCGTCAATT
ATGTGCGTTAACCACATCATTAAGCAGGGTCGTTGCACGCTGGTCACCAC
ACTCCAAATGTTCAAGATCCTTGCTCTGAACGCCCTCATTCAAGCCTACT
GTCAGTCCGTGCTCTATATTGATGGAATAAAATTCAGCGATACCCAAGCC
ACCATGCAGGGTATTTTCATTGCCGCCTGCTTCCTCTTTATCACACGAGC
TAAGCCGCTGAAAACTCTATCCAAGGTAGCTCCACTGCCAAATATCTTCA
ACTTCTACACGATATCGACCATTCTCAGTCAGTTTGCTGTGCATTTCGGA
ACGCTCTACTACCTGACCAGCCAAGCCAACATTTTGGCACCGCCTAGAGA
GGGCAAAGTGAAGTTGTACATTGATATGGATGCCGAGGAGAAGACCAAAT
ACGATCCAAATATTGTTAGCAGCACGGTGTACATAATTTGCCTATCATTA
CAAGTCGCTACCATTGCGGTGAATTACAAGGGCTATCCGTTCATGGAGAG
CTTGCGCTCCAATCGCATGCTGATGTATGCCATCGGAGCCTCCGCTGCAC
TGGTCATTCTTCTGTCCACGGGACTGGCGCCCGAACTGACGGAATTCTTT
GAGATAATTGACTTCCCAACGGATTTCCGTAAAACTTTGCTCGGCGTCCT
GGTCCTAGATATTGTAGGGGCTTTTCTTTTGGACCGTATTTGCTCATTCC
TGTTCGGGGAAACGCGTCGCAAATCTAAAGTGCTGAACTGTGCAAGCTTT
CTAGACCAT
BO32994.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:01:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6230-RA | 3678 | CG6230-PA | 1..3675 | 17..3691 | 18375 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:01:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6230-RA | 4327 | CG6230-RA | 149..3823 | 17..3691 | 18375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:01:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11118139..11120171 | 2049..17 | 10165 | 100 | Minus |
| 2L | 23513712 | 2L | 11117166..11118078 | 2957..2045 | 4565 | 100 | Minus |
| 2L | 23513712 | 2L | 11116910..11117107 | 3154..2957 | 990 | 100 | Minus |
| 2L | 23513712 | 2L | 11116311..11116456 | 3574..3429 | 730 | 100 | Minus |
| 2L | 23513712 | 2L | 11116702..11116846 | 3297..3153 | 725 | 100 | Minus |
| 2L | 23513712 | 2L | 11116508..11116643 | 3431..3296 | 680 | 100 | Minus |
| 2L | 23513712 | 2L | 11116139..11116255 | 3691..3575 | 585 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:01:11 has no hits.
BO32994.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-30 10:23:32 Download gff for
BO32994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6230-RA | 144..3818 | 17..3693 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:18 Download gff for
BO32994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6230-RA | 149..3823 | 17..3693 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:55:34 Download gff for
BO32994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6230-RA | 149..3823 | 17..3693 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:55:34 Download gff for
BO32994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11116137..11116255 | 3575..3693 | 98 | <- | Minus |
| 2L | 11116311..11116454 | 3431..3574 | 100 | <- | Minus |
| 2L | 11116509..11116641 | 3298..3430 | 100 | <- | Minus |
| 2L | 11116702..11116844 | 3155..3297 | 100 | <- | Minus |
| 2L | 11116910..11117106 | 2958..3154 | 100 | <- | Minus |
| 2L | 11117166..11118075 | 2048..2957 | 100 | <- | Minus |
| 2L | 11118141..11120171 | 17..2047 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:18 Download gff for
BO32994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11116311..11116454 | 3431..3574 | 100 | <- | Minus |
| arm_2L | 11116509..11116641 | 3298..3430 | 100 | <- | Minus |
| arm_2L | 11116702..11116844 | 3155..3297 | 100 | <- | Minus |
| arm_2L | 11116910..11117106 | 2958..3154 | 100 | <- | Minus |
| arm_2L | 11116137..11116255 | 3575..3693 | 98 | <- | Minus |
| arm_2L | 11117166..11118075 | 2048..2957 | 100 | <- | Minus |
| arm_2L | 11118141..11120171 | 17..2047 | 100 | | Minus |
BO32994.pep Sequence
Translation from 16 to 3709
> BO32994.pep
MTEAAGATNPGGAAGDAESYGKEMALQSGRPKEPTKLDDLVQYVSLHVRI
PTPLTGVVLPFVPLYLSAFYLWINVTGGQENDTTNNDVITADNQTTTDNI
TTWNDVGFIGVLAIAFLHILTLLFCYWSVHVLAFLTCRRVKLPGANVLAK
VVPTPNNGNSKIVPIRSSKLEDGSTQYYFVFQKTKYVWNEDRKTFRAVEF
PVNGLLSTYSSSRGLETEEDIKRATQTYGNNEMEMVVPEFHELFIERATA
PFFVFQVFSVGLWCMDDYWYYSLFTLFMLIAFECTIVKQQLRNMSEIRKM
GNKPYLIYAFRQNKWRHLGSDELLPGDLVSITRSQNDNIVPCDLVILRGS
CIVDESMLTGESVPLMKESLESLDNLDVEMDAEGDGKLFVLFGGTKVVQH
TAPTKESLRAPDGGCIGYVIRTGFNTSQGKLLRTILFGANRATENNVETF
AFIAFLMVFAVAAASYVWVKGSEDPERNRYKLFLECTLILTSIIPPDLPI
ELTLAVNTSLIQLTKLFVFCTEPFRIPFAGKVQICCFDKTGTLTTDNLMV
EGIAGLAPNGACVPIEKAEGNTVQVLACCHSLALLDDGLVGDPLEKATLA
AVDWTLTKMDSVIPKRPQFKPLKIIQRYHFSSALKRMSVLAGHLIPYSNE
VKHIGAVKGAPEVIQKMLREVPADYEKVYLEYARRGARVLALGIKDLGTL
GAQRVREMKREEVECDLTFAGFLIISCPMKPDSKSVIKELIQSSHKVVMI
TGDSPLTACHVARELRFTRKKLIILTPPEEDRKNNWSWVSIDGDQSYELD
TKPGSKKLSHLLATHDLCITGEGLQYLQQNQPQYMRQLLPQITVCARFAP
KQKELVITQLKQLGYCTLMCGDGTNDVGALKHANVGVSLLTSAPVKRKRT
EEEQQQAAANAAAIAAQAQANANQQLTTRERALRRRQEHLNQTQARLQNA
LRDMEEQTMVKLGDASIAAPFTSKSSSIMCVNHIIKQGRCTLVTTLQMFK
ILALNALIQAYCQSVLYIDGIKFSDTQATMQGIFIAACFLFITRAKPLKT
LSKVAPLPNIFNFYTISTILSQFAVHFGTLYYLTSQANILAPPREGKVKL
YIDMDAEEKTKYDPNIVSSTVYIICLSLQVATIAVNYKGYPFMESLRSNR
MLMYAIGASAALVILLSTGLAPELTEFFEIIDFPTDFRKTLLGVLVLDIV
GAFLLDRICSFLFGETRRKSKVLNCASFLDH
BO32994.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:20:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6230-PA | 1225 | CG6230-PA | 1..1225 | 1..1225 | 6309 | 100 | Plus |
| CG32000-PI | 1290 | CG32000-PI | 109..763 | 163..776 | 640 | 28.7 | Plus |
| CG32000-PB | 1314 | CG32000-PB | 133..787 | 163..776 | 640 | 28.7 | Plus |
| CG32000-PA | 1314 | CG32000-PA | 133..787 | 163..776 | 640 | 28.7 | Plus |
| CG32000-PG | 1388 | CG32000-PG | 207..861 | 163..776 | 640 | 28.7 | Plus |
