Clone BO33068 Report

Search the DGRC for BO33068

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:330
Well:68
Vector:pDNR-Dual
Associated Gene/TranscriptCG2747-RC
Protein status:BO33068.pep: Imported from assembly
Sequenced Size:6496

Clone Sequence Records

BO33068.complete Sequence

6496 bp assembled on 2012-07-27

GenBank Submission: KX797253

> BO33068.complete
GAAGTTATCAGTCGACATGGAAAACTTAAACTTTGCACGCACGCCGCAAT
TTCTGCGCAAAGTTATCTCCGAGGCGCGCAGATCGTTTATAAACAGCGAC
CATTTTTCCGCCTCATCGACAAGGGGACGCTCGGAAACTGAGGAGGAGGC
TATATCCGAAATGGAGCTGGCCCACACTTTGATCCTTAATGAGGATGCTC
TCAAGCAGTTGCCCGAACACAAGCGGCCTGTGTTCGAGTTGGAATGGCTG
CGCTACTTGGAGAAGGCCCTGCCACTGGTGTCCAAAGCGGAGATCAAGGC
GAGCCAGAAGAAGCTGGTGCAGCAGCTCTCTGAAAGAATCCAGGGCGCAC
CAGGTCCGCCCATTCGTAAGCTCATTGCTAGCGCGTTGGCCACGCTATTC
TCCGTTGGTGACACCTTCATGCTCTTCGACACCGTCAACGCCTGCAATGA
CATCCTGAAGAACAAGGACGACTCGCCCAGCTACTTGCCCACAAAGCTTG
CCGCCATTTGTGTGCTGGGCTCTATGTATGAGAAGCTGGGCAGGATGATG
GGCCGCACCTACGAGGATACGGTGCAGATCCTTATTCGAACGCTTCGCAA
CGCTGAGTCGCAGGCGCGGATTGAGATCATGCACACGCTGGAGAAGGTGA
GCGCTGGCATGGGCACAGCCATTGCCAACGTGCACAAGGATATTTACAAG
GCGGCCAAGCATTGCCTGTTGGACCGAGTTATGGCTGTTCGAGTGGCTGC
AGCCCGCTGCATCCTTAAAATGATATACAGTGCACCATTCCTGTACCAAA
CGGAGCTGGAAAGCTTGGGAACATTGTGTTTCCGAGCCTTCGACGGCAGC
AACTATGAAGTGCGATGTGCGGTAGCTCAGCTGCTGGGAACACTTCTAGC
CTATACTCAACAACTGGCAGAAGCGGCAACAAGCAAAAAGAAACAGGGAC
AAGCGGTGGCTATTCAAGCGGGCAAGGGAGCTACCCAACGCTTGGTTTCC
CTGGATGAAGCTCTGGGCATTCTCATGTCAGGTTTCCTTCGTGGTGGCGC
ATCTTTTCTCAAGGGTACCGGAGAGATTATCAAAGGCAGCTCAGGTGTCA
ACCGTGAGGTGCGAGTGGGTGTAACGCATGCATACGTGGTTTTCGTGCAA
TTCATGGGCAGCGTTTGGTTGGAACGACAGTTAAGCACATTTCTGGCACA
CGTTTTGGATCTCGTGGCCAATCCAAAGGCAGCGTGCTCCCACGTAGATG
CAGTGTATTCACGGAAATGCATTAGCTTTATACTCCGATCAACGATTGGA
AAGATGCTAGGCGAGAAGGCGCAGAGCGCTGCCTGCAAGGAACTGGTCCA
TCTGGTAGCCAAACAGATGAACTCAATTGACTTCAATCCCGAGAACGCCA
AGGATTCTAATCAAGAAACACTGTTCAGTCAGCACCTGCTGGTGTGTGCC
CTCCAGGAATTGAGTTCTCTACTTATTGGATTAGGAACCACGGCCCAGAA
CTTGTTGGGAGATCAATCCCTGCAAGCGATCGATGCTACCTGTGCCGTAT
TGGTACATCCCTGCGCCGCTGCCCGTTTGGCTGCCGCTTGGTGCTTACGA
TGCGCTTGTGTGGCGGTTCCTGGGCAAATCACGCCACTAATTGATCGCTT
TGTGGAGGCCATCGAGCAGATGCGATCCTCGCCAGAAGCAATGGCCGGAT
ATAGCTGCGCTTTGGCGGCAATTTTGGGAAGCGTTCGGTACTCGCCATTG
GGCATACCCCACACAAAGGGAAAGGTCGTGTTCAACTGTGCGGAGGAACT
GCTGCGATCTGCTTCCCAGAATAGCCGCATGTCGCTGCACCGTACCCAGG
CCGGCTGGCTATTAATTGGAGCTATAATGACTTTGGGATCGCCGGTAGTC
AAGGGCTTGCTGCCGCGAATGCTGCTACTGTGGCGGAACTCTTTCCCGCG
GTCCAACAAAGAGCTTGAATCGGAAAAGGCGCGCGGCGATGCCTTTACCT
GGCAGGTGACCCTAGAGGGCAGAGCTGGAGCTCTTTCTGTAATGCACAGC
TTCCTGCTTAATTGCCCGGATCTCCTGAACGAAGACATAACCAGACGACT
ACTCACCCCCATCGAAAGCGCCCTGGCCATGTTGGTCAACTTGGCATCTG
TCCTAAAGAGCTATGGAACCCAGCTAAAGGCACCGGCAGCTATGGTGCGG
CTTCGTCTCTTTGAAACGCTGACGCTGCTGCCTGCTAATGCGCTAGAGGC
CTCCTATACCCATCTTCTTCGCATGCTCGTCTCGGAGTTTACTCTTTCGG
ATAACGCGGCCAACACTACAAACTCATTGTTGCGGACGCTTTGTCATGGT
GATGATTCGATCATACTGGGCACCTGGCTGCAAGAAACTAATCATCGCAC
CATTGAGGATCAGCTGCAACCCAATAGCGCCGCGGGATCTGGCGCCTTAG
AGCACGATCCATGCTGTTTGTACCGTCCCAGGTCTGCCCAAGGCAATGGA
TCCAGCTCGAATGGTTCATCAGCAACATCTACTGGTGGAAGCAACGGCGG
TGGAGGAAGCAACATTCAGCAGATCAGCAAGGCCCAACAGTGTCCAGGAC
CATTGCCACTCGGGGTAGCAGTGATCGATATGGCAGTGACTCTGTATGGA
ACCATTTTTCCCAAAGTGGCAAACAAGCATAGGCTGCAAATGCTGGAGCA
CTTTACTGAGTGCATTCGCCAGGCCAAGAGCAGTCGCCAAGAAGCCGTTC
AAATGAATATCTTTACGGCTCTGCTATGCGCTCTAAAAAATCTGACAGAT
AGCAAGACAAGCCTAGGACAGGAGGATGTTCGAAAGAGTGCCACGGCATT
GATAGTTGCTTCGCTGACGAGTGCCAACTCTACCATACGGTGTGCGGCTG
GAGAGGCCTTGGGTCGATTGGCCCAGGTCGTGGGAGATTCTCATTTTACC
GCGGAGTTGGCTCAAAATAGTTTTGATAAACTAAAGTCTGCCAGAGATGT
GGTCACGAGGACGGGACATTCACATGCCCTGGGCTGCCTGCATCGCTATG
TGGGTGGCATGGGCTCGTCGCAGCATCTGAGCACCAGTGTATCTATCCTT
TTGGCCTTGGGTCAAGATAGTGCATCGCCAGTGGTACAGGCTTGGTCGCT
TTATGCTCTAGCGCAGATTGCCGACTCTGGAGGACCAATGTTCCGCGGCT
ACGTGGAGGCAACTTTGACGCTGTGTCTGAAACTTTTACTTACCGTACCC
CACGCTCATGTTGATGTACATCAGTGTGTGGGCCGTGTAGTCAATGCGTT
GATCACCACCGTGGGACCGGAGTTGCAAGGAGGAGGAGGCGCAGTGGCCA
CCATGAGAGGATCATTCCTCTGCTCAGCAGCTCTTCTTCAATCACATTCG
GATCCTCTTGTACAAGCTGAGGCTATTGGCTGCCTGCAGCAGCTACATCT
TTTTGCCAGTAAATCTCTGCAACTAGAGGAGTTGGTACCCACGCTGGTTG
GAATGCTAGCCTGTAACTATTTCATACTTCGCAAGGCCTCCGTTTCCTGC
CTCCGTCAGTTGGCCCATCGAGAAGCTAAGGAAGTGTGTGAATTAGCTTT
AACTATTAACGCCGAACAACTTCCGGATTTGGTAATTACGGAGTATGGAC
TTCCAGGGCTGCTTTTCTCACTGCTCGACACAGAAACGGATGCCGAGATG
CTGAGAAACATTCACGATACACTCACATCAATGCTCCAAATGCTGGCTGC
AGATAATCTCAGCTCCTGGTTGAGTCTTTGCAAGAATGTGTTAACCGTTG
CTGTGGAAGGAGGACTAAATGATGATCCCGCTGCTGGGGAACAAAGCAAG
AGCAAGGAGGCTGGTGGAGAAGATGATGAAGAGGACGAGGAGGAAGAGTA
TGCTGATGATGTAACAGAATACCGAGCAGAGGAGAACACATCCACCCATC
CAGCAGTGCAGCCAAGGTGGCCCACTCGTGTTTTCGCCGCCCAGTGCGTG
CGGCGGATCATAGCCAGCTGTGAGGCTGCCAGTTCAGTGCACTTTGATCT
CCTGCAGGCTAAGGAACAGCAACTTATTCGTTCTCGCGGAGATTACCTCA
TCCTCCATTTAGCGGAACTTATTCGAATGTCCTTTATGGCTGCCACCTCG
GACTCGGATCAATTGAGATTAGAAGGATTGCGCACCCTGCAGGAAATAAT
CGATCGATTTGCTAACGTTCCGGAACCGGAGTTCCCTGGTCACCTACTCT
TGGAGCAGTTCCAGGCTCAGGTGGGAGCTGCCTTGCGCCCTGCTTTCGCG
CCGGATACCCCCTCCCATGTGACAGCTGCTGCTTGTGAAGTTTGCTCAGC
GTGGATTGGATCTGGAGTGGCTCGCGACATAGGAGATCTAAAAAGAGTTC
ACCAGCTGTTAGTCAGTTCCCTTGATAAGCTTTCCTCAAAAACCAACAGC
ACTCAGTTATATAACGAATCCATGGCTACTTTGGAGAAGCTAAGCATTTT
AAAGGCGTGGGCAGAGGTTTATATTGTGGCCATGATAGGAAATGGAAAGG
CTCCGGCTTCCCTACTGAATCTCCAATCCCAACAATCCGGCTTTCAATCC
TTAACCAATCTGGAAACGGACTCGGATGTTCCTGACAGTAGGGGTGAAAG
TCTTTTAGGATTAGTGCAACCTGAGCTCCACAATCTTTCAACACACTGGC
TGAGTGCTATGAAGGATCACGCCTTGCTGCTTCTACCTGCGGAGTTCCAA
TCCCAACTACCGCACGACGGAGGAGCCTTTTACACCACGGACACCATTAA
TTCGTCAAAACCACATTACATGACCAGTTGGCCCCCAATCCTCTATGCCT
CCGCACTATGGTTAAGGGATGAAGGGTTCGCCCGTCATCTAGACACAAGT
GAAGCCGCAGCTGAGTCCAACAATAATCAGATCACTCATGGATCTTTGTC
AGCGGATCGCTTCCATATGATCTTCGGCATCTGCATGGAGGCGCTCTGCA
GCATGAGAAGCTCTGAAAGGCCGAGAAACATTGTGAGCTGCCTTCGCTCA
CTGCACAGCATCTTTGATTCTGATTGGGCTAGGAGGCAGTTGGTCAAGGA
TCGGGCTTTAACCATTGAACTCTGTCATGTTCTACATCGTCAGATACTGA
CGAGAGATGAATTACTCGTACAACTTCTGTGCGTAGAAATTTTAAAGCAA
ACAATCCGCGCTGCTAGGGAAGACTTAGAAAGAAAACGGGACGATAATGC
CAATTCTGAGGACGGAAAGGGTGGAGAGCGACATGGAGAAGATGATTCTA
TGCAGCCAGGAAGCTCGCATGTCTACGCCGTTCTGGAGGTTTGTCTTTGC
CTATTTGTTCGCCAAATACCTACGATGAATCCCACGAGGCAGGGAGCTGG
TGGCTCCGGCTTACAGCTGGACTTTGCCTATGCCAAAATGGCCACTGGCT
CGTCATTCTTCTCGGTGCTCGGCGATGAAAACGGCCTGCTAGTATCCAGC
GGACTGCAGTGCGTCGAACAGTTGATGGATTTGTGTACTCCCAAAGGTGC
CCTTGCAATCCTGCCCACCGTCCTGTATATGACAACCAGTATCGTTAAAG
AAATCGCCAACAAGTCGGCCATAGATAGTACTATCTTGGCAAATACGTGT
GCTGTGAAGTCTGCCCTGCAGTGCTTGCGATCCGTTTGTGTCCACAAGTG
GGCTAAAGTAGAGGAGACAACCGAGGAATGGCAACAGTTACTGCAAAGTG
CACTGGCCACCATTGTGGATCTCACCAAAACGGCTGGCGATAACGAGGAA
AGGAAAGTCGACGAGGTCACTATGCTGCTGGCCATCACTGTTTTTATTCT
ACATACTCCCGCCTCCGTTGTGGCTACACCTTCATTGCAATATCCATGCA
TTAATCACTTCCGGCAGTGCCTGCAGTCGGAGAACCTCTCGGTGAAGCTG
CGCTGCATCGAGACCACGCGATCGATCTTCGCTCGGGCCGAATTGAAGAC
GGCAACACCCTACATCCACGCACTTGCGCCTAGGATAATCGAATCGTTGT
ATGCGGAGTCCAGCAAGGTGCCCACAAGCGAACTGGAGCTACAGGTCACC
CTGGAGAGCATCGTTACCGTGGAGCAGCTTATAGACTTGTCGGAGCCGCA
GAACCATATTCAGATGCTGACTCTGTTGGTCCCTGTGCTCATTGGCTTCC
TAGCGGAACCCAGTCGACTCCGGACGCTGCCAAAGTATCAACGGCAGCTG
CACGACCAGGCGCTGCAGTGGCTACTGAAGATCGGTCCGAAATATCCGCA
GGAGTTTAAGGCCCTGATGGGTCAAACACCGGAACTGCGACAAAAACTAG
AAGCGGCCATTCGCAGCCAACAGCAGTCGATTAACATTGCCCAAAAAGCA
AGCGAGGCGCAGAGGAACCTGCTGGCCAAGCCGCAGAAGCCTACGATCAA
GCTGAAGACGGATTTCAGTAACTTCCAAGCAAGCTTTCTAGACCAT

BO33068.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:47:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG2747-RC 6465 CG2747-PC 1..6462 17..6478 32310 100 Plus
CG2747-RE 6486 CG2747-PE 1..6483 17..6478 32065 99.7 Plus
CG2747-RD 6321 CG2747-PD 1..6318 161..6478 31590 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:47:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG2747-RC 7026 CG2747-RC 334..6795 17..6478 32310 100 Plus
CG2747-RE 7289 CG2747-RE 334..6816 17..6478 32065 99.7 Plus
CG2747-RD 7016 CG2747-RD 146..6543 81..6478 31990 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:47:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8018208..8021951 6155..2412 18720 100 Minus
3R 32079331 3R 8022953..8024593 2139..499 8205 100 Minus
3R 32079331 3R 8024653..8025073 498..78 2105 100 Minus
3R 32079331 3R 8016683..8017005 6478..6156 1615 100 Minus
3R 32079331 3R 8022618..8022891 2413..2140 1370 100 Minus
3R 32079331 3R 8026777..8026841 81..17 325 100 Minus
Blast to na_te.dros performed on 2014-11-28 11:47:50 has no hits.

BO33068.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-27 14:03:04 Download gff for BO33068.complete
Subject Subject Range Query Range Percent Splice Strand
CG2747-RC 315..6776 17..6480 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:35 Download gff for BO33068.complete
Subject Subject Range Query Range Percent Splice Strand
CG2747-RC 334..6795 17..6480 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:51:26 Download gff for BO33068.complete
Subject Subject Range Query Range Percent Splice Strand
CG2747-RC 334..6795 17..6480 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:51:26 Download gff for BO33068.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8016680..8017005 6156..6480 99 <- Minus
3R 8018208..8021949 2414..6155 100 <- Minus
3R 8022618..8022891 2140..2413 100 <- Minus
3R 8022953..8024593 499..2139 100 <- Minus
3R 8024653..8025069 82..498 100 <- Minus
3R 8026777..8026841 17..81 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:35 Download gff for BO33068.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3842402..3842727 6156..6480 99 <- Minus
arm_3R 3843930..3847671 2414..6155 100 <- Minus
arm_3R 3848340..3848613 2140..2413 100 <- Minus
arm_3R 3848675..3850315 499..2139 100 <- Minus
arm_3R 3850375..3850791 82..498 100 <- Minus
arm_3R 3852499..3852563 17..81 100   Minus

BO33068.pep Sequence

Translation from 16 to 6496

> BO33068.pep
MENLNFARTPQFLRKVISEARRSFINSDHFSASSTRGRSETEEEAISEME
LAHTLILNEDALKQLPEHKRPVFELEWLRYLEKALPLVSKAEIKASQKKL
VQQLSERIQGAPGPPIRKLIASALATLFSVGDTFMLFDTVNACNDILKNK
DDSPSYLPTKLAAICVLGSMYEKLGRMMGRTYEDTVQILIRTLRNAESQA
RIEIMHTLEKVSAGMGTAIANVHKDIYKAAKHCLLDRVMAVRVAAARCIL
KMIYSAPFLYQTELESLGTLCFRAFDGSNYEVRCAVAQLLGTLLAYTQQL
AEAATSKKKQGQAVAIQAGKGATQRLVSLDEALGILMSGFLRGGASFLKG
TGEIIKGSSGVNREVRVGVTHAYVVFVQFMGSVWLERQLSTFLAHVLDLV
ANPKAACSHVDAVYSRKCISFILRSTIGKMLGEKAQSAACKELVHLVAKQ
MNSIDFNPENAKDSNQETLFSQHLLVCALQELSSLLIGLGTTAQNLLGDQ
SLQAIDATCAVLVHPCAAARLAAAWCLRCACVAVPGQITPLIDRFVEAIE
QMRSSPEAMAGYSCALAAILGSVRYSPLGIPHTKGKVVFNCAEELLRSAS
QNSRMSLHRTQAGWLLIGAIMTLGSPVVKGLLPRMLLLWRNSFPRSNKEL
ESEKARGDAFTWQVTLEGRAGALSVMHSFLLNCPDLLNEDITRRLLTPIE
SALAMLVNLASVLKSYGTQLKAPAAMVRLRLFETLTLLPANALEASYTHL
LRMLVSEFTLSDNAANTTNSLLRTLCHGDDSIILGTWLQETNHRTIEDQL
QPNSAAGSGALEHDPCCLYRPRSAQGNGSSSNGSSATSTGGSNGGGGSNI
QQISKAQQCPGPLPLGVAVIDMAVTLYGTIFPKVANKHRLQMLEHFTECI
RQAKSSRQEAVQMNIFTALLCALKNLTDSKTSLGQEDVRKSATALIVASL
TSANSTIRCAAGEALGRLAQVVGDSHFTAELAQNSFDKLKSARDVVTRTG
HSHALGCLHRYVGGMGSSQHLSTSVSILLALGQDSASPVVQAWSLYALAQ
IADSGGPMFRGYVEATLTLCLKLLLTVPHAHVDVHQCVGRVVNALITTVG
PELQGGGGAVATMRGSFLCSAALLQSHSDPLVQAEAIGCLQQLHLFASKS
LQLEELVPTLVGMLACNYFILRKASVSCLRQLAHREAKEVCELALTINAE
QLPDLVITEYGLPGLLFSLLDTETDAEMLRNIHDTLTSMLQMLAADNLSS
WLSLCKNVLTVAVEGGLNDDPAAGEQSKSKEAGGEDDEEDEEEEYADDVT
EYRAEENTSTHPAVQPRWPTRVFAAQCVRRIIASCEAASSVHFDLLQAKE
QQLIRSRGDYLILHLAELIRMSFMAATSDSDQLRLEGLRTLQEIIDRFAN
VPEPEFPGHLLLEQFQAQVGAALRPAFAPDTPSHVTAAACEVCSAWIGSG
VARDIGDLKRVHQLLVSSLDKLSSKTNSTQLYNESMATLEKLSILKAWAE
VYIVAMIGNGKAPASLLNLQSQQSGFQSLTNLETDSDVPDSRGESLLGLV
QPELHNLSTHWLSAMKDHALLLLPAEFQSQLPHDGGAFYTTDTINSSKPH
YMTSWPPILYASALWLRDEGFARHLDTSEAAAESNNNQITHGSLSADRFH
MIFGICMEALCSMRSSERPRNIVSCLRSLHSIFDSDWARRQLVKDRALTI
ELCHVLHRQILTRDELLVQLLCVEILKQTIRAAREDLERKRDDNANSEDG
KGGERHGEDDSMQPGSSHVYAVLEVCLCLFVRQIPTMNPTRQGAGGSGLQ
LDFAYAKMATGSSFFSVLGDENGLLVSSGLQCVEQLMDLCTPKGALAILP
TVLYMTTSIVKEIANKSAIDSTILANTCAVKSALQCLRSVCVHKWAKVEE
TTEEWQQLLQSALATIVDLTKTAGDNEERKVDEVTMLLAITVFILHTPAS
VVATPSLQYPCINHFRQCLQSENLSVKLRCIETTRSIFARAELKTATPYI
HALAPRIIESLYAESSKVPTSELELQVTLESIVTVEQLIDLSEPQNHIQM
LTLLVPVLIGFLAEPSRLRTLPKYQRQLHDQALQWLLKIGPKYPQEFKAL
MGQTPELRQKLEAAIRSQQQSINIAQKASEAQRNLLAKPQKPTIKLKTDF
SNFQASFLDH

BO33068.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG2747-PC 2154 CG2747-PC 1..2154 1..2154 10915 100 Plus
CG2747-PA 2165 CG2747-PA 1..2165 1..2154 10893 99.5 Plus
CG2747-PE 2161 CG2747-PE 1..2161 1..2154 10889 99.6 Plus
CG2747-PF 2172 CG2747-PF 1..2172 1..2154 10867 99.1 Plus
CG2747-PD 2106 CG2747-PD 1..2106 49..2154 10679 100 Plus