Clone BO33086 Report

Search the DGRC for BO33086

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:330
Well:86
Vector:pDNR-Dual
Associated Gene/TranscriptCdGAPr-RB
Protein status:BO33086.pep: Imported from assembly
Sequenced Size:5560

Clone Sequence Records

BO33086.complete Sequence

5560 bp assembled on 2012-07-27

GenBank Submission: KX794897

> BO33086.complete
GAAGTTATCAGTCGACATGTCGGACAAGGTGAGCACATCCTTGGCAGCCC
AGCTGCATTCCCATGCCCTGGCGTCGGCGGAAGCAGGTGGTATTGGTGGA
GTGAACGGTGGCCCAATTGCCTGCCATGCCAGCACGGATAAGGATGCCCA
GGCTCCACCGCTCCAGTTTGAAATGGATGCTCCGGCGGCCGCCATCAGTG
CCCAGCTAAACTTCAAAATCGTGCCCGCTGACAGTTTGCCAGGCCTGAGT
TATCAGGACATGTTCGCCTCCATGAATACATCACAAATCTCCAATGCCTC
CACGGAGTCCAGCTGCAGTCCGCCCATCCAGGGCGCTGTACCGCCTCCAA
AGCCCAGTCGTCACATGGCCGTACAGCCGCTGAATAGCAAATCGTGCCGA
TTTCCCAAGCTAGAGGAGTGCGCCCACTTCCACTACGAAAGGGTCCAGCT
GGGTCCGTTATCCGTGCAGCTGTTAGATGACAAGTCGGAGCACATGGGCA
GCAGTATTGCTTCCCAATCTCTTGGCGGTGATTTACCACACAGTTCGCTG
CGCAGCTTTTCTCCGGAGAGCTGTTGGTTTATCATCCGCGTGTGCCCACA
GCGCTGCGAACCGTTCCTGATCAAGCGGAGCTTCGAGAACATGCAACTGC
TGGACGAGATGCTCCACCGGTGCGTATACGACCGGAAAATTAGTGGACTG
CGCAACATGGAGGAACTGGCGGCCGAGCTGCCCAGCGAATCGGATGTGGA
ATATGCGGTGGCCAAGTACCTGGAGCGTTTCTCGAAGATCGCCTCCGATT
CACTGACCTGCGGCACAATTCTGACCTGGCTACAGCTGGACAATAAGGGC
AGGCGACTACCGCTGGCGGATGGTGAGACACAGAGGACTATCAACACACC
TGCGGTGGGTGCCGCCTACGGAGTGAGGCGTTATCAGGCCCAAGCTCCGG
ACGAGATCAACATTGAGGTGGGCGACATGATTTCCGTGATCGACATGCCC
AGTCCGGCGGAGTCGATTTGGTGGCGCGGCAAGAAGTCGCATCTGCAGAA
GTCCCTCTACGAAGTGGGTTTTTTCCCTCAATCCTGTGTGGCCACTATCG
GCGATAAGGTGCCCAGGAATTTTCCAATGCCAGCACCGCTAGTTGGTCAC
TTGGATGCTTCACCCACTAAGCCGGTGCTGCGTAAGCACGGCAAACTGAT
CGCCTTCTTCCGTTCCTTTATCCTGTCGCGACCATCACGTCGGCGCCTAA
AACAAAGTGGAATTTACCGCGAACGCGTCTTTAACTGTGACCTGTCCGAG
CATCTGCTGAACAGCGGTCAGGACATACCCATGGTTCTCCGATCCTGTGC
GGAGTTCATCGAAAACTATGGCGTTATAGATGGAATTTACCGTCTTTCCG
GCATCACCTCCAACATCCAGCGGCTAAGGCGCGCCTTCGATGAGGAGCGT
GTACCGGATTTGGGTAACCCTGAAATGAAGCAGGATATCCATGCAGTAAG
TTCGCTGCTCAAGATGTACTTCCGCGAGCTTCCAAATCCCCTGTGCACCT
ACCAACTGTACGACAACTTTGTAGAGGCCATCCAAGTGAAGGCCGACGAG
GCGGACGAGCGGCTGCGACTTATGAAGGAGACGGTGCTCAAGCTGCCTCC
GCCACACTATCGGACCCTAAAATATCTGGCCGAGCACTTGTACAAGGTGT
CACAACACCACGGTCGCACCGGAATGACGGACAAGAATCTGGCCATTGTT
TGGGCGCCAAATTTACTGCGCTCACCTGCCCTGGAATCGGGGGGCGTGGC
TGCTCTGCGTGGCGTTGGCGTGCAGGCGGTGGTCACCGAGTACCTGATAC
GGAATTGCCATAACATCTTCGACGCTCTGGACGATCATCCGGCGCGACAC
AGCATGGTGGCGAGTGCTACGGCTGCTGCTGCGAATGCGGCTGGTGGTGA
GCTACGCCTGGAGTCACTTACCGACTGCGAAAGTCTGCTAGTGGAGCAGC
GGGAGCAAGATCAATCTTTGGGCGTGGTGGAACGGCCAAAGAGTCTGAGC
ACCGGTGGAGCCAAACTGATAAGCCTGGAGGAGGCCCAGGAAAGGCATTC
GCGAGTGGAGGGGGCTGACCTCAAGCAGTCGCTGCCCATTAGCATGTTGA
CCAGCGCTAGTAGCAACGCTGCCTCCAACATTGGCTCCTACATCGAAGTG
GGCGGTGGTCCATCCAGCTTGCCGGATAAATACCACACGGTGCTGTCGGC
CCCGCGCAGCTGGCAGAAACGTAAGCCGGACAAGACGCCGTCTTGGAAGT
CGATTTTCTCCCGCAGTCAGCGACAGGGTAATCCCGATCCTGGCCAGAAA
ATAACCACAGATGTCAAGGATTCCGTTGCTTCCCGCGTGAGCTTTGTGCA
GGCATCACATGCTCATGCTAGCAAGGAACTGACCAAGCATGACAAGCCTA
AATCTATTGAACTCCTGGAGACAACGAGCAATGAACGTGATCCGAAACCA
ATGGACCTGTGCATACGCTCCAATTCAATTGATAGCCTGCGCACTGTTGG
TCATTCGAGGAGCGTCTCGCATGACTCGTACTTCGATTTACTGCAGTCAC
CGCAAAGGGGTCACATGACGACATGTCCGTCGCGGGAGCTTTCCGAGCTA
GGTCTCAATTTCGACCGCGAAGAGCCGGAAATGCGCATCTTCTCAGAGAG
CGAATCTCTGGTTAGCTCACCGCGCGTGGGCAAGGAGAATGTTCCACCTG
CCTCTGGCTCCGCCACTCGTCGCATAATGCGCGCTCGTCCTGAGGATTTC
TCCAGCCAGACAAATAGCGTTAATCCCAGTCCTAAAAAGCAGCCACGCCT
CAATCTCCTATCGCCCAGCTCGGCCAGGACGATGCCCCCACCGCCTCTTT
CAGCGCCTGGAACTGCATCTTCCTCCTGTGGACATGAATCCGGTGGAGCT
GAAAACTGCTGTAAGCGATACAAGCTGGAAGATCAGTTGTGTGACATTCA
GTTCATTGACTGTGGAACTCCCGAAAATGTGCCCACCACTCAACAGCAGT
TCGCCAGTGTTGAAGTGCACCCGCCACCAAAGCCAGCTAGGGCAAACCAA
TCTCCCATATCGTCGTCGAATGGTGCATCTGTAGGCTCCTCCTCCTCGTC
GACCCGCTACAGCTATCCGTCTGTGCAGCTGGGGGCCAAACGGAAAGAAC
AGCAGGATGCTAAGGAGCGTTTCAGCTACCAGGGAACCTTTACGCAGCCA
GGACAGAAACAGGAATCTTCAGCTCCAAGACCTGTGCATACCAACAACGG
TGCTACTCTACGAAAACCTCGAGTGGAACCCGTCGAAGATGGTCAGATCA
AGCTGCATGTGCCTACGCCTACAACACCTGCCCGCAGTCCCCGGTACTCC
TTGTTGTTGTGCGACACCGAAAGCTCCGATAACAGTTCGGCGGTAAATAC
ACCGCAATATGACATGGAGCCCCTTATGCTGACATCGGCCATGTCTGGCG
TATCCGGTGTTTCATCCAATGTACAGCAGCAGCAGCTGCTTTTAGGTGTG
GATGCGTCCAGCAGTTACCTAGGCAGCTCGCACGAGAGCTTGGGACAGAA
CATCAACAACCACCATGATGCTGAGCAGCGTGATATGAATGCCCTAAAAA
GGGAGCTATCCTTGGACCTTAACCCACTGCAGCCGCGCTTACCACAGCCC
GCAAATCGAGCTGCCACTTTACCGGTTAAAGATCAGCTGCAGGCTGCTGC
AGCGGCCATGTGCTCATCGCCCAACAATTCCAATTTTACGGACAATACTA
GTCAGTCAGTGACACCGAGCGAGTATGGTTATCAGCACTTGCAGCGACAG
CTAAGCATGCACTCTCTGCTGGCGACTGATGAGAGTTCGCCCGTGTACGA
GGACTTCGAACAGACCCCCGTCAAGATGGTGCCCAGCCCCATAAAATCCA
CCATTAGCATCACATACAAGTCGCCCGAGAAGGAAAAGAAACCTTCGGCC
ATCTTAGAGACCAACTTCGATGAAAACACTGTATATGAGCAGGTGAAGCT
GTTCCGGAACTCGGTAACCGAGGTTAATCAAATGTTACATGAGCGTTCAA
GCCTGAAACAGATTGCCGAGGAGGAGCAGCACGATGGAGGTGCTTACAAG
GCAGCAGAGATGACGCAGCAACTGCTGCAGCTTGAACAGGAGCACCACGA
CCACGAAGAGCAGCAGGAGAAAGAGCCTGAGGATGAGGAGCAATCCCAGC
TACTTTACGAAAACATTGAGCTACGCAAACCGAAAACAGTTTACGAAAAT
CTACGTGGCGAGGAGATGAAATTCATTACAGAAGAACAGAAACCCAACGT
TGATAGAATTGAGCTTGATAGTTTAGACAGCTTGCCAGACAACATGGAAC
ACGAACAGTCGTCGCCCAGCAAATCGCCCACTTTCAGTGTCAAGGAGTTG
GCCAACAAATTCGAGAGCTCGCCTGTGGAGCAGCTGCCCAACTTTGATTT
TTCGGTGCGTGGCGGCTCGATGAAGAAACCTAACGAACTGAGCGTACCCA
AGACGATGCCCGCACCCGTGCCACTCAAGAAACTGAACAGCAGTGCCCAA
AAAATAACCCGCTCGTTGGATGAGAACGCCTTCGTCAGAGAGTTTGGGGG
CAAGCAACTACAAGATCTGTCTCTCTCTAACAAACTGCCCGAAGTAATGT
CAGAGGTCAACAGCCGGCGCAAGAGCTTTGACTTCACGCGACCTAAAACC
TTGAATCCACCAAAGCGGTTGCCTGGTATGAGCATTACCGAGGAGATATG
CCAGAAGCGTGTTGGCGAAATGGAGGCAATTACCCCCACCACCGAGAACC
GCATCTCACTCATCCAGCAGAATAATATGCCCAAAGAGCAGCAATCGTCG
GCTAATCAGTTCCTGCCCCCGGCGGGTCGAAAGAACGTATTAACAGGCGT
GGTCTTGGATCGTGAGCGCATCGACAAAATCAAGGAGGAGCGGCGTCAGC
AGCTAACGCAAAAGTACTACGGCGATACTCTCAAGTCTCGGTCGCGTACG
GAACTGAACTCTGAAGACAACTTCCCGGCTGCAGAATCCCTGCGAATCAA
GTCCAAGTCACGCGGCGATATGCATGCCTTGCAAAAGGATATCGACATGA
ACCTAAAGCAACTGAGCCGCGTCACTGGCGGCGGATCGGAGTGCACCCTC
CACACGGGCTTGAGCCAGGGTAACGGACAGGAGCATCTGGGACAACAGCG
CGTGCGCCGGATTTCCGACGAAAAGAACCAAAATTGTGATACCAGTAATG
GTGGCGTAAGTGGCATAACCTCCACTTCGCTACTCAGCGTCAAGACGACG
GCCCAGAAATATGGAAGCACCAGCAAGACGCCAGCGAATAAATTTGAACG
TAGTCAGCCCATGCCACGCGATCGCTTGCAGAGGAACTCCTTGGCCGAGA
GCAATGCAGGCACCAACAACAGAGAAAAGATCTCACCACAATTCTCAATA
CGCGACGTGACAGCGATGTTCGAATCTCGTTCACAAAATCAAGCAAGCTT
TCTAGACCAT

BO33086.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:52:44
Subject Length Description Subject Range Query Range Score Percent Strand
CdGAPr-RB 5529 CG10538-PB 1..5526 17..5542 27630 100 Plus
CdGAPr-RD 5532 CG10538-PD 1..5529 17..5542 27565 99.9 Plus
CdGAPr-RA 5532 CG10538-PA 1..5529 17..5542 27565 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:52:46
Subject Length Description Subject Range Query Range Score Percent Strand
CdGAPr-RB 6366 CG10538-RB 152..5678 16..5542 27635 100 Plus
CdGAPr-RD 7824 CG10538-RD 224..5753 16..5542 27570 99.9 Plus
CdGAPr-RA 7522 CG10538-RA 152..5681 16..5542 27570 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:52:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19777082..19778946 5466..3602 9325 100 Minus
2L 23513712 2L 19779400..19781026 3288..1662 8135 100 Minus
2L 23513712 2L 19781091..19782365 1663..389 6375 100 Minus
2L 23513712 2L 19782421..19782793 388..16 1865 100 Minus
2L 23513712 2L 19779018..19779330 3601..3289 1565 100 Minus
2L 23513712 2L 19776945..19777020 5542..5467 380 100 Minus
Blast to na_te.dros performed 2014-11-28 11:52:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6788..6872 4166..4250 164 65.9 Plus

BO33086.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-27 18:25:48 Download gff for BO33086.complete
Subject Subject Range Query Range Percent Splice Strand
CdGAPr-RB 171..5696 17..5544 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:09 Download gff for BO33086.complete
Subject Subject Range Query Range Percent Splice Strand
CdGAPr-RB 153..5678 17..5544 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:52:43 Download gff for BO33086.complete
Subject Subject Range Query Range Percent Splice Strand
CdGAPr-RB 153..5678 17..5544 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:52:43 Download gff for BO33086.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19776943..19777020 5467..5544 97 <- Minus
2L 19777082..19778946 3602..5466 100 <- Minus
2L 19779018..19779330 3289..3601 100 <- Minus
2L 19779400..19781025 1663..3288 100 <- Minus
2L 19781092..19782365 389..1662 100 <- Minus
2L 19782421..19782792 17..388 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:09 Download gff for BO33086.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19776943..19777020 5467..5544 97 <- Minus
arm_2L 19777082..19778946 3602..5466 100 <- Minus
arm_2L 19779018..19779330 3289..3601 100 <- Minus
arm_2L 19779400..19781025 1663..3288 100 <- Minus
arm_2L 19781092..19782365 389..1662 100 <- Minus
arm_2L 19782421..19782792 17..388 100   Minus

BO33086.pep Sequence

Translation from 16 to 5560

> BO33086.pep
MSDKVSTSLAAQLHSHALASAEAGGIGGVNGGPIACHASTDKDAQAPPLQ
FEMDAPAAAISAQLNFKIVPADSLPGLSYQDMFASMNTSQISNASTESSC
SPPIQGAVPPPKPSRHMAVQPLNSKSCRFPKLEECAHFHYERVQLGPLSV
QLLDDKSEHMGSSIASQSLGGDLPHSSLRSFSPESCWFIIRVCPQRCEPF
LIKRSFENMQLLDEMLHRCVYDRKISGLRNMEELAAELPSESDVEYAVAK
YLERFSKIASDSLTCGTILTWLQLDNKGRRLPLADGETQRTINTPAVGAA
YGVRRYQAQAPDEINIEVGDMISVIDMPSPAESIWWRGKKSHLQKSLYEV
GFFPQSCVATIGDKVPRNFPMPAPLVGHLDASPTKPVLRKHGKLIAFFRS
FILSRPSRRRLKQSGIYRERVFNCDLSEHLLNSGQDIPMVLRSCAEFIEN
YGVIDGIYRLSGITSNIQRLRRAFDEERVPDLGNPEMKQDIHAVSSLLKM
YFRELPNPLCTYQLYDNFVEAIQVKADEADERLRLMKETVLKLPPPHYRT
LKYLAEHLYKVSQHHGRTGMTDKNLAIVWAPNLLRSPALESGGVAALRGV
GVQAVVTEYLIRNCHNIFDALDDHPARHSMVASATAAAANAAGGELRLES
LTDCESLLVEQREQDQSLGVVERPKSLSTGGAKLISLEEAQERHSRVEGA
DLKQSLPISMLTSASSNAASNIGSYIEVGGGPSSLPDKYHTVLSAPRSWQ
KRKPDKTPSWKSIFSRSQRQGNPDPGQKITTDVKDSVASRVSFVQASHAH
ASKELTKHDKPKSIELLETTSNERDPKPMDLCIRSNSIDSLRTVGHSRSV
SHDSYFDLLQSPQRGHMTTCPSRELSELGLNFDREEPEMRIFSESESLVS
SPRVGKENVPPASGSATRRIMRARPEDFSSQTNSVNPSPKKQPRLNLLSP
SSARTMPPPPLSAPGTASSSCGHESGGAENCCKRYKLEDQLCDIQFIDCG
TPENVPTTQQQFASVEVHPPPKPARANQSPISSSNGASVGSSSSSTRYSY
PSVQLGAKRKEQQDAKERFSYQGTFTQPGQKQESSAPRPVHTNNGATLRK
PRVEPVEDGQIKLHVPTPTTPARSPRYSLLLCDTESSDNSSAVNTPQYDM
EPLMLTSAMSGVSGVSSNVQQQQLLLGVDASSSYLGSSHESLGQNINNHH
DAEQRDMNALKRELSLDLNPLQPRLPQPANRAATLPVKDQLQAAAAAMCS
SPNNSNFTDNTSQSVTPSEYGYQHLQRQLSMHSLLATDESSPVYEDFEQT
PVKMVPSPIKSTISITYKSPEKEKKPSAILETNFDENTVYEQVKLFRNSV
TEVNQMLHERSSLKQIAEEEQHDGGAYKAAEMTQQLLQLEQEHHDHEEQQ
EKEPEDEEQSQLLYENIELRKPKTVYENLRGEEMKFITEEQKPNVDRIEL
DSLDSLPDNMEHEQSSPSKSPTFSVKELANKFESSPVEQLPNFDFSVRGG
SMKKPNELSVPKTMPAPVPLKKLNSSAQKITRSLDENAFVREFGGKQLQD
LSLSNKLPEVMSEVNSRRKSFDFTRPKTLNPPKRLPGMSITEEICQKRVG
EMEAITPTTENRISLIQQNNMPKEQQSSANQFLPPAGRKNVLTGVVLDRE
RIDKIKEERRQQLTQKYYGDTLKSRSRTELNSEDNFPAAESLRIKSKSRG
DMHALQKDIDMNLKQLSRVTGGGSECTLHTGLSQGNGQEHLGQQRVRRIS
DEKNQNCDTSNGGVSGITSTSLLSVKTTAQKYGSTSKTPANKFERSQPMP
RDRLQRNSLAESNAGTNNREKISPQFSIRDVTAMFESRSQNQASFLDH

BO33086.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:15:39
Subject Length Description Subject Range Query Range Score Percent Strand
CdGAPr-PB 1842 CG10538-PB 1..1842 1..1842 9490 100 Plus
CdGAPr-PD 1843 CG10538-PD 1..1843 1..1842 9478 99.9 Plus
CdGAPr-PA 1843 CG10538-PA 1..1843 1..1842 9478 99.9 Plus
CdGAPr-PC 1840 CG10538-PC 1..1840 1..1842 9462 99.8 Plus
RhoGAP5A-PA 494 CG3208-PA 301..491 421..618 273 34 Plus