Clone BO33108 Report

Search the DGRC for BO33108

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:331
Well:8
Vector:pDNR-Dual
Associated Gene/TranscriptCG3502-RB
Protein status:BO33108.pep: Imported from assembly
Sequenced Size:2770

Clone Sequence Records

BO33108.complete Sequence

2770 bp assembled on 2013-04-18

GenBank Submission: KX798923

> BO33108.complete
GAAGTTATCAGTCGACATGTGGCGGGCTCAGCCAAGTCTCTGGATCTGGT
GGATCTTCTTAATCCTTGTTCCTTCCATCAGAGCTGTCTACGAGGATTAT
CGTTTGCCCAGATCTGTGGAGCCTTTGCACTACAACCTGCGAATTCTCAC
ACACCTAAATAGCACCGATCAAAGATTCGAGGGATCTGTGACAATAGATC
TTCTGGCACGGGAGACCACCAAGAACATCACCTTGCATGCGGCGTACTTA
AAGATAGATGAGAACCGAACATCAGTTGTTTCTGGCCAGGAAAAGTTTGG
AGTTAATCGAATCGAAGTGAATGAGGTGCACAACTTCTACATCCTGCACT
TGGGTCGGGAATTGGTAAAGGATCAGATCTACAAGTTGGAAATGCACTTC
AAAGCCGGGCTAAATGATTCCCAAAGTGGGTACTATAAAAGTAACTACAC
GGATATAGTTACCAAGGAAGTTCATCACCTGGCGGTCACTCAGTTCTCAC
CCACATTTGCCAGGCAGGCATTTCCCTGCTTCGATGAACCATCCTGGAAG
GCGACCTTTAACATAACCCTTGGCTATCATAAAAAATACATGGGATTGAG
TGGCATGCCTGTTCTCAGGTGTCAGGATCATGATAGTCTTACAAATTATG
TATGGTGCGATCACGACACTCTTCTAAGGACCTCAACCTATTTGGTGGCC
TTTGCTGTCCATGATCTGGAAAATGCCGCCACCGAGGAGAGTAAGACCAG
CAATAGAGTTATCTTTCGCAACTGGATGCAGCCGAAGTTGTTGGGTCAGG
AAATGATATCCATGGAAATTGCACCAAAGCTGCTCTCCTTCTATGAGAAT
TTATTCCAAATTAACTTTCCGCTGGCGAAAGTGGACCAACTGACGGTGCC
CACTCACAGATTTACGGCCATGGAGAACTGGGGTCTGGTCACCTACAACG
AGGAAAGATTGCCTCAAAATCAAGGCGATTATCCGCAGAAACAGAAGGAT
AGTACTGCCTTCACGGTGGCTCACGAATATGCCCATCAGTGGTTCGGAAA
TTTGGTCACCATGAATTGGTGGAATGATCTCTGGTTGAAGGAAGGTCCAT
CTACCTACTTCGGCTACCTGGCCCTCGATTCTTTGCAGCCCGAATGGAGA
AGAGGAGAGCGCTTTATATCAAGGGATTTGGCGAACTTCTTTAGCAAAGA
CTCGAACGCAACTGTGCCGGCCATCTCCAAGGATGTTAAGAATCCCGCCG
AGGTGCTCGGACAGTTCACGGAGTATGTGTACGAGAAGGGATCGCTGACC
ATCCGCATGCTGCACAAACTTGTCGGAGAGGAAGCCTTCTTCCACGGAAT
TCGATCTTTTTTGGAACGCTTTTCTTTTGGTAATGTGGCCCAAGCTGATC
TTTGGAATTCCCTGCAAATGGCTGCTTTGAAAAACCAGGTTATTTCGTCC
GACTTTAACCTAAGTAGGGCCATGGATTCTTGGACCCTACAGGGTGGTTA
TCCCTTGGTAACCCTTATACGGAACTACAAAACTGGCGAGGTAACACTCA
ATCAGAGCAGATTCTTCCAGGAGCATGGAATTGAAAAGGCTTCATCCTGC
TGGTGGGTTCCTTTAAGGTTCGTTAGGCAAAATCTACCGGACTTTAATCA
AACTACCCCACAGTTTTGGTTGGAATGTCCCTTGAACACTAAAGTACTGA
AGTTGCCCGATCATCTATCCACTGACGAGTGGGTCATACTGAATCCCCAA
GTAGCAACCATCTTCAGAGTTAACTATGATGAGCACAACTGGCGCTTGAT
AATCGAGAGTCTGAGGAATGATCCCAATTCTGGTGGCATCCACAAACTAA
ATAAAGCTCAGTTGCTGGATGATCTCATGGCTTTGGCTGCAGTCCGGCTA
CACAAATATGACAAAGCATTCGATTTGCTGGAATATCTGAAGAAAGAGCA
GGACTTTTTGCCTTGGCAGAGGGCCATTGGTATCCTCAATCGACTGGGAG
CCCTACTGAATGTCGCGGAGGCAAACAAATTTAAGAACTACATGCAGAAG
CTACTTTTGCCATTGTATAACCGCTTTCCAAAGCTATCAGGAATAAGGGA
AGCTAAGCCCGCCATCAAGGACATTCCATTTGCACACTTTGCATATTCAC
AGGCCTGTCGTTACCATGTGGCTGATTGCACGGATCAGGCCAAGATTCTC
GCTATAACCCATAGAACTGAAGGTCAGCTGGAGCTGCCCTCCGATTTCCA
GAAGGTTGCTTACTGCTCGCTACTGGATGAAGGTGGCGATGCAGAGTTCC
TGGAAGTATTCGGACTGTTCCAGAACTCCACCAATGGATCGCAGAGAAGG
ATATTGGCATCTGCGCTCGGTTGTGTTCGTAACTTTGGGAACTTCGAACA
GTTTCTGAACTACACACTTGAATCCGACGAGAAACTGCTCGGTGATTGCT
ATATGTTAGCAGTGAAATCCGCACTAAATAGGGAACCTTTGGTTTCTCCC
ACAGCAAACTATATTATAAGCCATGCCAAGAAACTCGGTGAAAAATTCAA
GAAGAAAGAGCTCACGGGACTTTTGCTTAGTTTGGCTCAAAATCTTCGAA
GTACGGAGGAAATTGATCGACTTAAAGCGCAGTTAGAAGACCTCAAGGAG
TTTGAAGAACCTCTGAAGAAAGCCCTCTATCAGGGCAAAATGAACCAGAA
ATGGCAGAAAGATTGCTCCAGCGATTTTATCGAGGCTATAGAGAAACACT
TAGCAAGCTTTCTAGACCAT

BO33108.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:17:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG3502-RB 2739 CG3502-PB 1..2736 17..2752 13680 100 Plus
sda-RD 3585 CG5518-PD 1834..1898 1031..1095 190 86.2 Plus
sda-RC 3252 CG5518-PC 1501..1565 1031..1095 190 86.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:17:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG3502-RB 3171 CG3502-RB 353..3090 15..2752 13690 100 Plus
sda-RD 5182 CG5518-RD 2645..2709 1031..1095 190 86.2 Plus
sda-RC 4849 CG5518-RC 2312..2376 1031..1095 190 86.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:17:01
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23344317..23345721 2035..631 7025 100 Minus
2R 25286936 2R 23343759..23344263 2538..2034 2525 100 Minus
2R 25286936 2R 23346004..23346463 474..15 2300 100 Minus
2R 25286936 2R 23343486..23343700 2752..2538 1075 100 Minus
2R 25286936 2R 23345791..23345946 630..475 780 100 Minus
3R 32079331 3R 26942455..26942519 1031..1095 190 86.2 Plus
Blast to na_te.dros performed 2014-11-28 13:17:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dbif\P-element_M 2935 Dbif\P-element_M P_M 2935bp Derived from X60990. 1682..1733 1410..1359 116 69.2 Minus

BO33108.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 15:01:13 Download gff for BO33108.complete
Subject Subject Range Query Range Percent Splice Strand
CG3502-RB 351..3086 17..2754 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:02:23 Download gff for BO33108.complete
Subject Subject Range Query Range Percent Splice Strand
CG3502-RB 355..3090 17..2754 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:25:14 Download gff for BO33108.complete
Subject Subject Range Query Range Percent Splice Strand
CG3502-RB 355..3090 17..2754 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:25:14 Download gff for BO33108.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23343482..23343699 2539..2754 99 <- Minus
2R 23343759..23344261 2036..2538 100 <- Minus
2R 23344317..23345721 631..2035 100 <- Minus
2R 23345791..23345946 475..630 100 <- Minus
2R 23346004..23346461 17..474 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:02:23 Download gff for BO33108.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19231005..19231222 2539..2754 99 <- Minus
arm_2R 19231282..19231784 2036..2538 100 <- Minus
arm_2R 19231840..19233244 631..2035 100 <- Minus
arm_2R 19233314..19233469 475..630 100 <- Minus
arm_2R 19233527..19233984 17..474 100   Minus

BO33108.pep Sequence

Translation from 16 to 2770

> BO33108.pep
MWRAQPSLWIWWIFLILVPSIRAVYEDYRLPRSVEPLHYNLRILTHLNST
DQRFEGSVTIDLLARETTKNITLHAAYLKIDENRTSVVSGQEKFGVNRIE
VNEVHNFYILHLGRELVKDQIYKLEMHFKAGLNDSQSGYYKSNYTDIVTK
EVHHLAVTQFSPTFARQAFPCFDEPSWKATFNITLGYHKKYMGLSGMPVL
RCQDHDSLTNYVWCDHDTLLRTSTYLVAFAVHDLENAATEESKTSNRVIF
RNWMQPKLLGQEMISMEIAPKLLSFYENLFQINFPLAKVDQLTVPTHRFT
AMENWGLVTYNEERLPQNQGDYPQKQKDSTAFTVAHEYAHQWFGNLVTMN
WWNDLWLKEGPSTYFGYLALDSLQPEWRRGERFISRDLANFFSKDSNATV
PAISKDVKNPAEVLGQFTEYVYEKGSLTIRMLHKLVGEEAFFHGIRSFLE
RFSFGNVAQADLWNSLQMAALKNQVISSDFNLSRAMDSWTLQGGYPLVTL
IRNYKTGEVTLNQSRFFQEHGIEKASSCWWVPLRFVRQNLPDFNQTTPQF
WLECPLNTKVLKLPDHLSTDEWVILNPQVATIFRVNYDEHNWRLIIESLR
NDPNSGGIHKLNKAQLLDDLMALAAVRLHKYDKAFDLLEYLKKEQDFLPW
QRAIGILNRLGALLNVAEANKFKNYMQKLLLPLYNRFPKLSGIREAKPAI
KDIPFAHFAYSQACRYHVADCTDQAKILAITHRTEGQLELPSDFQKVAYC
SLLDEGGDAEFLEVFGLFQNSTNGSQRRILASALGCVRNFGNFEQFLNYT
LESDEKLLGDCYMLAVKSALNREPLVSPTANYIISHAKKLGEKFKKKELT
GLLLSLAQNLRSTEEIDRLKAQLEDLKEFEEPLKKALYQGKMNQKWQKDC
SSDFIEAIEKHLASFLDH

BO33108.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:08:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG3502-PB 912 CG3502-PB 1..912 1..912 4831 100 Plus
SP1029-PE 932 CG11956-PE 24..918 20..898 1563 36.6 Plus
SP1029-PD 932 CG11956-PD 24..918 20..898 1563 36.6 Plus
SP1029-PA 932 CG11956-PA 24..918 20..898 1563 36.6 Plus
SP1029-PB 932 CG11956-PB 24..918 20..898 1563 36.6 Plus