Clone BO33122 Report

Search the DGRC for BO33122

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:331
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptHr46-RA
Protein status:BO33122.pep: Imported from assembly
Sequenced Size:1495

Clone Sequence Records

BO33122.complete Sequence

1495 bp assembled on 2013-04-18

GenBank Submission: KX795171

> BO33122.complete
GAAGTTATCAGTCGACATGTATACGCAACGTATGTTTGACATGTGGAGCA
GCGTCACTTCGAAACTGGAAGCACACGCAAACAATCTCGGTCAAAGCAAC
GTCCAATCGCCGGCGGGACAAAACAACTCCAGCGGTTCCATTAAAGCTCA
AATTGAGATAATTCCATGCAAAGTCTGCGGCGACAAGTCATCCGGCGTGC
ATTACGGAGTGATCACCTGCGAGGGCTGCAAGGGATTCTTTCGAAGATCG
CAGAGCTCCGTGGTCAACTACCAGTGTCCGCGCAACAAGCAATGTGTGGT
GGACCGTGTTAATCGCAACCGATGTCAATATTGTAGACTGCAAAAGTGCC
TAAAACTGGGAATGAGCCGTGATGCTGTAAAGTTCGGCAGGATGTCCAAG
AAGCAGCGCGAGAAGGTCGAGGACGAGGTACGCTTCCATCGGGCCCAGAT
GCGGGCACAAAGCGACGCGGCACCGGATAGCTCCGTATACGACACACAGA
CGCCCTCGAGCAGCGACCAGCTGCATCACAACAATTACAACAGCTACAGC
GGCGGCTACTCCAACAACGAGGTGGGCTACGGCAGTCCCTACGGATACTC
GGCCTCCGTGACGCCACAGCAGACCATGCAGTACGACATCTCGGCGGACT
ACGTGGACAGCACCACCTACGAGCCGCGCAGTACAATAATCGATCCCGAA
TTTATTAGTCACGCGGATGGCGATATCAACGATGTGCTGATCAAGACGCT
GGCGGAGGCGCATGCCAACACAAATACCAAACTGGAAGCTGTGCACGACA
TGTTCCGAAAGCAGCCGGATGTGTCGCGCATTCTCTACTACAAGAATCTG
GGCCAAGAGGAACTCTGGCTGGACTGCGCCGAGAAGCTTACACAAATGAT
ACAGAACATAATCGAATTTGCTAAGCTCATACCGGGATTCATGCGCCTAA
GTCAGGACGATCAGATATTACTGCTGAAGACGGGCTCCTTTGAGCTGGCG
ATTGTTCGCATGTCCAGACTGCTTGATCTCTCACAGAACGCGGTTCTCTA
CGGCGACGTGATGCTGCCCCAGGAGGCGTTCTACACATCCGACTCGGAAG
AGATGCGTCTGGTGTCGCGCATCTTCCAAACGGCCAAGTCGATAGCCGAA
CTCAAACTGACTGAAACCGAACTGGCGCTGTATCAGAGCTTAGTGCTGCT
CTGGCCAGAACGCAATGGAGTGCGTGGTAATACGGAAATACAGAGGCTTT
TCAATCTGAGCATGAATGCGATCCGGCAGGAGCTGGAAACGAATCATGCG
CCGCTCAAGGGCGATGTCACCGTGCTGGACACACTGCTGAACAATATACC
CAATTTCCGCGATATTTCCATCTTGCACATGGAATCGCTGAGCAAGTTCA
AGCTGCAGCACCCGAATGTCGTTTTTCCGGCGCTGTACAAGGAGCTGTTC
TCGATAGATTCGCAGCAGGACCTGACAGCAAGCTTTCTAGACCAT

BO33122.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:17:07
Subject Length Description Subject Range Query Range Score Percent Strand
Hr46-RF 1464 CG33183-PF 1..1461 17..1477 7305 100 Plus
Hr46-RH 1590 CG33183-PH 1..1461 17..1477 7305 100 Plus
Hr46-RA 1464 CG33183-PA 1..1461 17..1477 7305 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:17:08
Subject Length Description Subject Range Query Range Score Percent Strand
Hr46-RF 7524 CG33183-RF 2048..3508 17..1477 7305 100 Plus
Hr46-RH 6071 CG33183-RH 2054..3514 17..1477 7305 100 Plus
Hr46-RA 6071 CG33183-RA 2054..3514 17..1477 7305 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:17:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10208401..10208646 1208..963 1230 100 Minus
2R 25286936 2R 10209880..10210113 374..141 1155 99.6 Minus
2R 25286936 2R 10209101..10209273 713..541 865 100 Minus
2R 25286936 2R 10209440..10209609 543..374 850 100 Minus
2R 25286936 2R 10208191..10208343 1359..1207 765 100 Minus
2R 25286936 2R 10208706..10208853 964..817 740 100 Minus
2R 25286936 2R 10222477..10222606 146..17 650 100 Minus
2R 25286936 2R 10208011..10208129 1477..1359 595 100 Minus
2R 25286936 2R 10208920..10209025 818..713 530 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:17:06 has no hits.

BO33122.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 15:01:19 Download gff for BO33122.complete
Subject Subject Range Query Range Percent Splice Strand
Hr46-RA 227..1687 17..1479 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:02:25 Download gff for BO33122.complete
Subject Subject Range Query Range Percent Splice Strand
Hr46-RA 2054..3514 17..1479 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:25:15 Download gff for BO33122.complete
Subject Subject Range Query Range Percent Splice Strand
Hr46-RA 2054..3514 17..1479 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:25:15 Download gff for BO33122.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10208191..10208341 1209..1359 100 <- Minus
2R 10208009..10208128 1360..1479 98 <- Minus
2R 10208401..10208644 965..1208 100 <- Minus
2R 10208706..10208852 818..964 100 <- Minus
2R 10208921..10209024 714..817 100 <- Minus
2R 10209101..10209270 544..713 100 <- Minus
2R 10209440..10209608 375..543 100 <- Minus
2R 10209880..10210107 147..374 100 <- Minus
2R 10222477..10222606 17..146 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:02:25 Download gff for BO33122.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6095514..6095633 1360..1479 98 <- Minus
arm_2R 6095696..6095846 1209..1359 100 <- Minus
arm_2R 6095906..6096149 965..1208 100 <- Minus
arm_2R 6096211..6096357 818..964 100 <- Minus
arm_2R 6096426..6096529 714..817 100 <- Minus
arm_2R 6096606..6096775 544..713 100 <- Minus
arm_2R 6096945..6097113 375..543 100 <- Minus
arm_2R 6097385..6097612 147..374 100 <- Minus
arm_2R 6109982..6110111 17..146 100   Minus

BO33122.pep Sequence

Translation from 16 to 1495

> BO33122.pep
MYTQRMFDMWSSVTSKLEAHANNLGQSNVQSPAGQNNSSGSIKAQIEIIP
CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKQCVVDRVNR
NRCQYCRLQKCLKLGMSRDAVKFGRMSKKQREKVEDEVRFHRAQMRAQSD
AAPDSSVYDTQTPSSSDQLHHNNYNSYSGGYSNNEVGYGSPYGYSASVTP
QQTMQYDISADYVDSTTYEPRSTIIDPEFISHADGDINDVLIKTLAEAHA
NTNTKLEAVHDMFRKQPDVSRILYYKNLGQEELWLDCAEKLTQMIQNIIE
FAKLIPGFMRLSQDDQILLLKTGSFELAIVRMSRLLDLSQNAVLYGDVML
PQEAFYTSDSEEMRLVSRIFQTAKSIAELKLTETELALYQSLVLLWPERN
GVRGNTEIQRLFNLSMNAIRQELETNHAPLKGDVTVLDTLLNNIPNFRDI
SILHMESLSKFKLQHPNVVFPALYKELFSIDSQQDLTASFLDH

BO33122.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:08:09
Subject Length Description Subject Range Query Range Score Percent Strand
Hr46-PF 487 CG33183-PF 1..487 1..487 2522 100 Plus
Hr46-PH 529 CG33183-PH 1..487 1..487 2522 100 Plus
Hr46-PA 487 CG33183-PA 1..487 1..487 2522 100 Plus
Hr46-PE 874 CG33183-PE 408..874 19..487 2295 95.1 Plus
Hr46-PC 694 CG33183-PC 228..694 19..487 2295 95.1 Plus