BO33123.complete Sequence
577 bp assembled on 2012-08-22
GenBank Submission: KX796344
> BO33123.complete
GAAGTTATCAGTCGACATGAAAAGGTTATATTTCATATGTGGACTATACT
TCCTTATGGACTTGGCTAAATGTGAAAATCGCAGGTTACGGATTTTCTTT
GATGAGTTTGCGATCAAGTATAAGGTGCCAGACATTTTCGAAAAAATGGA
TTGTAATTTGTATCAAGCGAATAATCGAAGCTACGTCAACGTCGAGATGA
AACTGAAAAAGGAAGTTTCAGATTTGAATGTTCGCGCTATAATGGAGTTT
TGGAAGCCAAATGCCCAAAATAAAATGAAGTTGTACGACGTTCGAGTGGA
TGGATGTCTTATACTCCGAACTATTCACAAAAATAAACTATTCTACTTCT
ATGTGAAGAGCTTTAAGAAACATTCCAATGTTGTTTTGTCGTGTCCCTTT
AAAGCGAACTTTACCTACAAAATGGATGATTGGTTTTTGGACGAAGAAGA
GCTACCACCTTTTGCTCCTGTTGGCCAATTCCGCACGGTCACCGAATATT
TTACCCAACAACGATTGATAATACGTGTTGTAGCACATGGGGCAGTTTTG
CCAAGATCAGCAAGCTTTCTAGACCAT
BO33123.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:14:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33641-RA | 546 | CG33641-PA | 1..543 | 17..559 | 2700 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:14:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33641-RA | 721 | CG33641-RA | 1..543 | 17..559 | 2700 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:14:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13529041..13529431 | 16..406 | 1940 | 99.7 | Plus |
| 2L | 23513712 | 2L | 13529490..13529643 | 406..559 | 770 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:14:31 has no hits.
BO33123.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:07:51 Download gff for
BO33123.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33641-RA | 1..543 | 17..561 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:27 Download gff for
BO33123.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33641-RA | 1..543 | 17..561 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:00:16 Download gff for
BO33123.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33641-RA | 1..543 | 17..561 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:00:16 Download gff for
BO33123.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13529042..13529431 | 17..406 | 99 | -> | Plus |
| 2L | 13529491..13529643 | 407..561 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:27 Download gff for
BO33123.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13529491..13529643 | 407..561 | 98 | | Plus |
| arm_2L | 13529042..13529431 | 17..406 | 99 | -> | Plus |
BO33123.pep Sequence
Translation from 16 to 577
> BO33123.pep
MKRLYFICGLYFLMDLAKCENRRLRIFFDEFAIKYKVPDIFEKMDCNLYQ
ANNRSYVNVEMKLKKEVSDLNVRAIMEFWKPNAQNKMKLYDVRVDGCLIL
RTIHKNKLFYFYVKSFKKHSNVVLSCPFKANFTYKMDDWFLDEEELPPFA
PVGQFRTVTEYFTQQRLIIRVVAHGAVLPRSASFLDH
BO33123.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:22:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33641-PA | 181 | CG33641-PA | 1..181 | 1..181 | 965 | 100 | Plus |
| CG33642-PA | 187 | CG33642-PA | 22..182 | 18..178 | 478 | 53.4 | Plus |
| CG33645-PB | 173 | CG33645-PB | 2..165 | 18..181 | 418 | 43.9 | Plus |
| CG33643-PA | 178 | CG33643-PA | 21..177 | 22..180 | 335 | 42.5 | Plus |
| CG33640-PB | 178 | CG33640-PB | 24..177 | 26..180 | 186 | 25.8 | Plus |
