BO33125.complete Sequence
1189 bp assembled on 2012-08-22
GenBank Submission: KX797422
> BO33125.complete
GAAGTTATCAGTCGACATGTGGAAAATTCTGTGCGGGATCGTCGTTCTCG
TGACGATTGTGGTGAATCAGCTGTCTGAAGCAAGGGAAGTCCGCCGGCGA
AGAGGCCTTATGCTCCAATTGGACAACTACCTTAGCTACGATGGAATAAT
GCAGTATCTGGATGAGCTGGCTCTGTCCCACAGTAACCGGGTGACCCTAA
AGGATGTGGCTCGGACCTACGAGAACAGAGCCCTGAAAATGGCGATAATA
ACCAACGGAGATGGACGTCCCGGAAAGAGAGTGATATTCTTGGATGCTGC
CCTCCATTCGCGTGAGTGGATGACTCCCGCCGCCGCCCTGCTCACCATCC
ATAAACTGGTGGTGGAGTTTGCGGAGAATTCCGACCTTTTGACTGATTAC
GATTGGCACATTATGCCACTGGCAAATCCAGATGGCTACGAGTATTCACG
GAACACAGAGCGATACTGGAGAAACACGAGGACACCGAATGGCGGCAACT
GTTTTGGCACCAATCTCAACAGGAATTTTGCCGTTGACTGGAATGTGGGT
TTTCCAGAACTAAAGGATCCCTGCGATGAGAACTACGCTGGTAGTTCACC
ATTCTCAGAGGTGGAGGCACGTACAGTGCGCGACATAATGCACGGCCTAG
TGGAAAGCAAACGGGCTGTAATGTATCTCTCACTGCACACGGCAAACCGA
TCGGTCTTCTATCCTTGGGTCTACGATACAGATCCAGTGTCAAACCAAAA
GGAGCATGACGAAATCGGAAGATTTGTTGCTGATAGAATTTTGCAAAGCA
CGGGCACCTTTATAAAGACGTGGCAATATGCTAAATATGCCGGAACATTT
GGTGGCACCAGCATGGACTACGCACTGCTTGCAGGATTTCCACTATCCTT
TGTGTTCGAGATGTCTGGAACGGGAAGGGATCATGTGGAGTACAAGTTCT
TTCCTCCGGCCAGAGATATACGGCATTTGGCTGAAGAGTCCTGGACGGGA
ATTAAAGCGTTTGCCGAGAAGACCATTGAGAAATATCCTCCATCCAGGGT
GATTTCTTATAACCCAATGGTTAAACTTGCTGAAAACGCTGCAACACGAA
ATTTGGGCTTTAATTCAATGGTTGCAACAGTTTGCCTCTTCTTTACATAT
TTGACCAACTGCAATTTTTTTGCAAGCTTTCTAGACCAT
BO33125.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:15:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8539-RB | 1158 | CG8539-PB | 1..1155 | 17..1171 | 5775 | 100 | Plus |
| CG8539-RA | 1158 | CG8539-PA | 1..1155 | 17..1171 | 5775 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:15:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8539-RB | 1538 | CG8539-RB | 197..1353 | 15..1171 | 5785 | 100 | Plus |
| CG8539-RA | 1319 | CG8539-RA | 37..1193 | 15..1171 | 5785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:15:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7497921..7498635 | 729..15 | 3575 | 100 | Minus |
| 3L | 28110227 | 3L | 7497396..7497837 | 1171..730 | 2210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:15:10 has no hits.
BO33125.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:07:55 Download gff for
BO33125.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8539-RA | 39..1193 | 17..1173 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:42 Download gff for
BO33125.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8539-RA | 39..1193 | 17..1173 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:00:32 Download gff for
BO33125.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8539-RA | 39..1193 | 17..1173 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:00:32 Download gff for
BO33125.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7497394..7497837 | 730..1173 | 99 | <- | Minus |
| 3L | 7497921..7498633 | 17..729 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:42 Download gff for
BO33125.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7490494..7490937 | 730..1173 | 99 | <- | Minus |
| arm_3L | 7491021..7491733 | 17..729 | 100 | | Minus |
BO33125.pep Sequence
Translation from 16 to 1189
> BO33125.pep
MWKILCGIVVLVTIVVNQLSEAREVRRRRGLMLQLDNYLSYDGIMQYLDE
LALSHSNRVTLKDVARTYENRALKMAIITNGDGRPGKRVIFLDAALHSRE
WMTPAAALLTIHKLVVEFAENSDLLTDYDWHIMPLANPDGYEYSRNTERY
WRNTRTPNGGNCFGTNLNRNFAVDWNVGFPELKDPCDENYAGSSPFSEVE
ARTVRDIMHGLVESKRAVMYLSLHTANRSVFYPWVYDTDPVSNQKEHDEI
GRFVADRILQSTGTFIKTWQYAKYAGTFGGTSMDYALLAGFPLSFVFEMS
GTGRDHVEYKFFPPARDIRHLAEESWTGIKAFAEKTIEKYPPSRVISYNP
MVKLAENAATRNLGFNSMVATVCLFFTYLTNCNFFASFLDH
BO33125.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:23:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8539-PB | 385 | CG8539-PB | 1..385 | 1..385 | 2049 | 100 | Plus |
| CG8539-PA | 385 | CG8539-PA | 1..385 | 1..385 | 2049 | 100 | Plus |
| CG18417-PA | 427 | CG18417-PA | 122..425 | 33..341 | 641 | 43.7 | Plus |
| CG8562-PA | 424 | CG8562-PA | 119..424 | 33..340 | 610 | 41.5 | Plus |
| CG8560-PB | 418 | CG8560-PB | 129..418 | 44..340 | 596 | 42.2 | Plus |
