BO33128.complete Sequence
2041 bp assembled on 2012-09-18
GenBank Submission: KX799181
> BO33128.complete
GAAGTTATCAGTCGACATGGTCAACGCTTTGTGGGCCACGTTAATATCGC
TCACTTTAATCGGCCGTGTTTTAGCCAACGATCTATTTTCCCTGCCACCC
GCCACGAATCACAGAGAGGAAATGCTCGAGGATTATGGACGTTTCCTGCT
GTCCACCATGAACAGGACCATCGATCCGTGCGAGAACTTTTACGAATTCA
GTTGTGGCGGTTGGAAGAAGGCGGATTTGGTACCGGAACAGGCCAGGAAT
ACCAGTTTTCTAAACGCAATCCAGCACAAAATCGACGAGCAGATTCAGGG
ATTCCTGCAGAATGCCACCAAAAGAGAGTTGGAGGATCTGGGAGTTAATG
GCACCACGTCGGCGGAGATTAAAGCCAAGCAATTCTATGCCAGCTGTGTG
GAAATGAAGGCCAACTTGTCGTTGGGTTATCAATATTTTATGGAACACGA
TGGGGATCGCTTAAAGGAGCGCAATGCGACCTACGATTGGATGTACATCA
ACTTTATGTCCAAATACGACATATATCCTTTGCTAGCGCTCAAAGTTCAC
TATAGTACTTCTTCGAGGAAGTTCGATATACTTTTAACGCTTCCCAGTAA
AGTTTTAGCTGGTTTCAGTGAGGAGCAGTTGAAAAATATGACCAGAGAGT
TTGGCTTGGATTCAAGTGCAGAGAAAGTCAAGCAATTTGTGGAGAACTTT
AACAATCTAACGCAATTTGAAAGAAATTTAGTTTCCTTAGCCAAAAGTCG
CAATGAAACAGAGCAGTTGAATTTCAAGGAATTTCTGGTGAAGCATAAAC
ACGATCGTTTGAATTGGACACGATTTTTTGAACTGGCCTTCAATGGCAGT
CAGGAGTCCCACTGGCCAGTGCTCAATCAATTGGATAATATCAACGATTT
GGTTTTCTTTCTGGAACAAACCAATCTGGAAACGTTAAAAGGTTATATAA
AAATGCGAGAGCTGGTCAAGTTTTATGGCTTGTGGAAAACTCAAACTAAA
ACAGGGGGAGTTCAAAGTGAATGTCGCTCTTTGTCGGAGACGTATTTTAA
TTACGCTTTGTTGCCCTGGTTTATTGGAAAGGTGTTCGATAAGGAGAGGC
GCGCAGATATCCTGAGTGTTGCCAAGGACATTAAGGACACGTTCTATGAT
CTCCTGGACCATCACACGTGGTTGGATGAAGATACTCGTTCGCAGGCTAA
GACCAAACTGGCATCCATGGATATTTTAGTGGGCTATACGGATGATCTGC
AGCATCGCGAAGTGATCGATGGTGTTTACAGCGATATCAATATGACCGGC
AATTGGTTCGAGAACCTGTGCATCCTGGAGGGCAGTAGAGCCAGGATACG
TCTGCGATCGGTGGACAAGGCACTGATTCCCCTTCTCATGCCCACGAGAA
CAGTGAATGCGTACTATGCTGATTTTCTTAACTTGGCCTTTATTACCATT
GGGATGGCCCAGTGGCCCTTCTATCATATAGACTTTCCCGATGTCCTCAA
ATACGCTGGAGTGGGCAATATTATAGGCCATGAAATGGCCCATGGATTCG
ATAGCTATTGTTATCAGTACAATTATGATGGCAAGAAGACGAACTGGTGG
TCCTCAGCTTCACTGAGAAACTTTAAAGAACGATATCGCTGCCTCGAATC
GCAGTATAACAAATTTATTTTGATGGGCGTCCAGACAAATGGAAGTCTCA
CCTCTGGCGATAATATCGCCGATAATGTTGGCACTCGAATGGCATATTAC
GCATTCAAGAGGAAAACTGGCGACAAGGCTTGGTTGGAAAAACCACTGAG
GGGTGTTAATTTCAACAACAAACAGCTGTTCTTCGTTAAGTTTGCGCAAA
CCTGGTGCAACGGCAAGGATAATGGCGATAAGCTCCGGAGACTGAAGACT
GATGTCCACGCCTATGATGAGTTCCGGGTTCAGGGCACCCTGAGCAATAT
GCCCGAGTTCAGCGAGGCTTTTAATTGTAAACTGGGCACCGAGATGAATC
CGCTCAAGAAGTGCGTGGTTTGGGCAAGCTTTCTAGACCAT
BO33128.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:14:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15485-RB | 2010 | CG15485-PB | 1..2007 | 17..2023 | 10035 | 100 | Plus |
| CG15485-RA | 2010 | CG15485-PA | 1..2007 | 17..2023 | 10035 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:14:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15485-RB | 2107 | CG15485-RB | 80..2087 | 16..2023 | 10040 | 100 | Plus |
| CG15485-RA | 2467 | CG15485-RA | 440..2447 | 16..2023 | 10040 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:14:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12667268..12669275 | 2023..16 | 10040 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:14:07 has no hits.
BO33128.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-18 16:29:52 Download gff for
BO33128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15485-RA | 441..2447 | 17..2025 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:30 Download gff for
BO33128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15485-RA | 441..2447 | 17..2025 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:23:59 Download gff for
BO33128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15485-RA | 441..2447 | 17..2025 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:23:59 Download gff for
BO33128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12667265..12669274 | 17..2025 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:30 Download gff for
BO33128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12667265..12669274 | 17..2025 | 99 | | Minus |
BO33128.pep Sequence
Translation from 16 to 2041
> BO33128.pep
MVNALWATLISLTLIGRVLANDLFSLPPATNHREEMLEDYGRFLLSTMNR
TIDPCENFYEFSCGGWKKADLVPEQARNTSFLNAIQHKIDEQIQGFLQNA
TKRELEDLGVNGTTSAEIKAKQFYASCVEMKANLSLGYQYFMEHDGDRLK
ERNATYDWMYINFMSKYDIYPLLALKVHYSTSSRKFDILLTLPSKVLAGF
SEEQLKNMTREFGLDSSAEKVKQFVENFNNLTQFERNLVSLAKSRNETEQ
LNFKEFLVKHKHDRLNWTRFFELAFNGSQESHWPVLNQLDNINDLVFFLE
QTNLETLKGYIKMRELVKFYGLWKTQTKTGGVQSECRSLSETYFNYALLP
WFIGKVFDKERRADILSVAKDIKDTFYDLLDHHTWLDEDTRSQAKTKLAS
MDILVGYTDDLQHREVIDGVYSDINMTGNWFENLCILEGSRARIRLRSVD
KALIPLLMPTRTVNAYYADFLNLAFITIGMAQWPFYHIDFPDVLKYAGVG
NIIGHEMAHGFDSYCYQYNYDGKKTNWWSSASLRNFKERYRCLESQYNKF
ILMGVQTNGSLTSGDNIADNVGTRMAYYAFKRKTGDKAWLEKPLRGVNFN
NKQLFFVKFAQTWCNGKDNGDKLRRLKTDVHAYDEFRVQGTLSNMPEFSE
AFNCKLGTEMNPLKKCVVWASFLDH
BO33128.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:37:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15485-PB | 669 | CG15485-PB | 1..669 | 1..669 | 3565 | 100 | Plus |
| CG15485-PA | 669 | CG15485-PA | 1..669 | 1..669 | 3565 | 100 | Plus |
| Nep3-PC | 786 | CG9565-PC | 115..786 | 44..669 | 616 | 27.7 | Plus |
| Nep3-PB | 786 | CG9565-PB | 115..786 | 44..669 | 616 | 27.7 | Plus |
| Nep3-PA | 786 | CG9565-PA | 115..786 | 44..669 | 616 | 27.7 | Plus |
