BO33142.complete Sequence
1529 bp assembled on 2012-09-18
> BO33142.complete
GAAGTTATCAGTCGACATGTCTAGTGCCAGGCTACTCGAGTCGCAGACAT
CCGACGAGGATAACGAGGACATCGAGCGGCGGCCTCACCAGAGCCATTCA
CGCAGCTGCAGCAACAACACCACCCCCACCCATCCACCACATCCCATGGT
CAGGAAGGGGGGTGTGGCCAGGAGGATCTGCCTGATAGGTGGGGCACTGT
TCCTGCTCCTCGTCGCCCTCTGCTACCTCACCCTCAGCGGGGACACTCGC
CTCGGTGGCTCCGAGGATTCGGAGGAGGGATCTCACCATGGATTAGGTAA
GCAGCGGATCTCAGTAATGGAATCCCGCCCGGCTGACTGGCTGTTGAGAT
ATACTCGACCTGACAAGCACGAGGGGGATGACCGGAATCCAGGTGAAGAG
GAGTTCCCAGGGAATCTTAGTCATAGAGCGCAAGAAATCTACGAATATGA
ATGGAATTTCAAGATAGAAGAGCAAACGACCAAGCAAATGCAAATCCGAA
ATAGGCATCGTTTCGATCCCAGAATCCATAGTATGAATTTCCGGCCATTG
AACGAAACCGTTCACATATGCAGCGAGAGTTACGAGGATCGACGGCAGTT
CATGCAGGATAAGCCCCAATCTGATTACGTCCAGTTGCCCGTGATATACT
TTGTTACTCCAACGTATCCGCGGCGCGAGCAAATCCCAGAACTAACCCGT
CTGGCGCACACGCTGCTCCATATTCCACGATTGCACTGGCTGGTGGCCGA
TGATCAAGAGAAATGCAATGACTATATGGACACGCTGCTCTATCGATTTG
GTATGCCCTTTACCCACATGGTCAGCCCGATGCCCAGCAAATTCCGGAAT
GAAAAGCCAGCGCCGCGAGGTGTGGCAAATCGGAGGGCAGCCTTGCAGTG
GATACGGCAGCATAATCTCACCAACGGAATACTTTACTTCGGAGACGACG
ACAACACCTATGATCTGCGTTTGTTCTCTGAAATCCGGAAAACGCAACGG
GTTTCCATGTTTCCTGTAGGTCTTATTGCTGATTATGGGGTCAGCGGGCC
AGTTGTGCGCAAAGGCAAGGTTGTAGCATTCCTGGACTCCTGGGTTGCCG
GTCGACGCTGGCCCGTTGACATGGCCGGTTTTGCAGTGAATTTGGAGTAC
ATGGCGCAGTATCCCTATGTGAATATGCCGTACAAGCCCGGCTACGAAGA
AGATCTCTTTCTGCGCAGCATTGGCCTTCAAATGAATCTGATTGAGCCGC
GCGGCAATAACTGCACCGAAATTCTGGTTTGGCACACGCAGACAAAGTCA
AAGAAGCTCGGAATGGTTCGATTAGAAAGCAAATACTTGGACGATCGTTC
TAACTTGGGCGCTCTGCTTCATAATCTTAAACTAATGGGCGTGACCAGTA
CAACGGAAAGTGAAGGACGCAATGCACTGATCAGCAAAAATGGAAGGGAA
AATCCACACTCCAAAATTCTTAGCGCTAAGCTTTCTAAGACCTATTCGAT
GGGGCGGCGGCAGGGGGGGCGGAGGGGTT
BO33142.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:14:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GlcAT-S-RC | 1461 | CG3881-PC | 1..1458 | 17..1474 | 7290 | 100 | Plus |
| GlcAT-S-RB | 1230 | CG3881-PB | 281..1227 | 528..1474 | 4735 | 100 | Plus |
| GlcAT-S-RA | 984 | CG3881-PA | 35..981 | 528..1474 | 4735 | 100 | Plus |
| GlcAT-S-RB | 1230 | CG3881-PB | 1..280 | 17..296 | 1400 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:14:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GlcAT-S-RC | 2116 | CG3881-RC | 495..1952 | 17..1474 | 7290 | 100 | Plus |
| GlcAT-S-RB | 2406 | CG3881-RB | 775..1721 | 528..1474 | 4735 | 100 | Plus |
| GlcAT-S-RA | 1677 | CG3881-RA | 46..992 | 528..1474 | 4735 | 100 | Plus |
| GlcAT-S-RB | 2406 | CG3881-RB | 495..774 | 17..296 | 1400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:14:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9617330..9617840 | 17..527 | 2555 | 100 | Plus |
| 2L | 23513712 | 2L | 9621957..9622309 | 1064..1416 | 1765 | 100 | Plus |
| 2L | 23513712 | 2L | 9621145..9621420 | 528..803 | 1380 | 100 | Plus |
| 2L | 23513712 | 2L | 9621478..9621742 | 800..1064 | 1325 | 100 | Plus |
| 2L | 23513712 | 2L | 9622363..9622424 | 1413..1474 | 310 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:14:41 has no hits.
BO33142.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-18 16:29:55 Download gff for
BO33142.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-S-RC | 493..1954 | 17..1480 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:40 Download gff for
BO33142.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-S-RC | 495..1956 | 17..1480 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:24:12 Download gff for
BO33142.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-S-RC | 495..1956 | 17..1480 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:24:12 Download gff for
BO33142.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9617330..9617840 | 17..527 | 100 | -> | Plus |
| 2L | 9621145..9621417 | 528..800 | 100 | -> | Plus |
| 2L | 9621479..9621741 | 801..1063 | 100 | -> | Plus |
| 2L | 9621957..9622308 | 1064..1415 | 100 | -> | Plus |
| 2L | 9622366..9622428 | 1416..1480 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:40 Download gff for
BO33142.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9617330..9617840 | 17..527 | 100 | -> | Plus |
| arm_2L | 9621145..9621417 | 528..800 | 100 | -> | Plus |
| arm_2L | 9621479..9621741 | 801..1063 | 100 | -> | Plus |
| arm_2L | 9621957..9622308 | 1064..1415 | 100 | -> | Plus |
| arm_2L | 9622366..9622428 | 1416..1480 | 95 | | Plus |
BO33142.pep Sequence
Translation from 16 to 1528
> BO33142.pep
MSSARLLESQTSDEDNEDIERRPHQSHSRSCSNNTTPTHPPHPMVRKGGV
ARRICLIGGALFLLLVALCYLTLSGDTRLGGSEDSEEGSHHGLGKQRISV
MESRPADWLLRYTRPDKHEGDDRNPGEEEFPGNLSHRAQEIYEYEWNFKI
EEQTTKQMQIRNRHRFDPRIHSMNFRPLNETVHICSESYEDRRQFMQDKP
QSDYVQLPVIYFVTPTYPRREQIPELTRLAHTLLHIPRLHWLVADDQEKC
NDYMDTLLYRFGMPFTHMVSPMPSKFRNEKPAPRGVANRRAALQWIRQHN
LTNGILYFGDDDNTYDLRLFSEIRKTQRVSMFPVGLIADYGVSGPVVRKG
KVVAFLDSWVAGRRWPVDMAGFAVNLEYMAQYPYVNMPYKPGYEEDLFLR
SIGLQMNLIEPRGNNCTEILVWHTQTKSKKLGMVRLESKYLDDRSNLGAL
LHNLKLMGVTSTTESEGRNALISKNGRENPHSKILSAKLSKTYSMGRRQG
GRRG
BO33142.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:37:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GlcAT-S-PC | 486 | CG3881-PC | 1..486 | 1..486 | 2602 | 100 | Plus |
| GlcAT-S-PB | 409 | CG3881-PB | 93..409 | 170..486 | 1680 | 99.4 | Plus |
| GlcAT-S-PA | 327 | CG3881-PA | 13..327 | 172..486 | 1679 | 100 | Plus |
| GlcAT-P-PE | 316 | CG6207-PE | 68..301 | 208..440 | 607 | 47.7 | Plus |
| GlcAT-P-PB | 316 | CG6207-PB | 68..301 | 208..440 | 607 | 47.7 | Plus |
| GlcAT-S-PB | 409 | CG3881-PB | 1..93 | 1..93 | 491 | 100 | Plus |
