BO33159.complete Sequence
2116 bp assembled on 2012-09-18
GenBank Submission: KX795595
> BO33159.complete
GAAGTTATCAGTCGACATGGCGTACCTACTAAGCTTTGGCATCGTGGCCG
CCCTATTCCTGGCCAGCATCTCGCTGTACCGTTACGGAAACATACCACGT
CAGCACATCCTGGTCACCCTGTCCGTGCTGACCGCCTGGTGTTTCTCCTT
TCTAATTGTATTCACCATTCCGCTGGACGTGACATCGACGCTTTACCGGC
AGTGCGTGGAGGAGCACCGACCGACCCCAGCCCCAAATGTGACCAACACG
TCGAGCGCCACGGTGGGTCCGCCGCCTCAGTGCCAGGAACCGTGGGGCAT
GGTGCCCGCCTCCGTGTTCCCAAACCTCTGGCGCATTATTTACTGGAGCT
CACAGTTCCTCACCTGGTTGATTATGCCGCTGATGCAGTCGTACCTTAAG
GCGGGCGACTTCACCGTCAAGGGAAAACTTAAATCGGCACTGATAGAGAA
TGCCATCTACTACGGTTCCTACCTGTTCATCTGTGGCGTACTACTCATCT
ATATTGCCGTCAAAGGAGAGTCTCTGGATTGGCAAAAGCTCAAGGCAATT
GCCTCGTCCGCATCGAACACATGGGGATTGTTTCTGCTCATCCTGTTACT
GGGATATGCTCTGGTGGAGGTACCTCGATCGTTGTGGAACAACGCCAAGC
CGGGATTTGCACTGCAATATGCCTACTTCAAGGCAGCCAAATTGAGCACT
GAGAAGGCCGAGGCTGAGGAGCATGTGGATGATATCCTTGAGTCGCTGCA
AGGCCTTAGCCGCGTCATACCCAACAATCACGAGTTGCGCCCCTGCCTGG
AGACCATTCTGCGCAAGGTTCCCATTGAGCTGCAAGAGCGAGCGAGTCGA
AACTTTGCGCGCACTGGAGGCAGCGGCATGGGTGCCACGAGTTCCACTAT
CTTGCCTTCGGAAAAGGCGCTGGTTCGCATTCATAAGCAAGTAATCAAAT
CGCTGCAAACATTGCAGCGCACCGAAGCGCTATGGAGCGTGCAGGTGCAG
ACAGTGCTGCATCTGGAGGATGTGGCCAAGAATATACACTCTTCGGACCG
GCGCTTCAAATCTGAGTTTCCGCGCCAGCGCACGCAGCTGGAGAGGATCT
GCTACAGCGCCTCGCTGCAGTGGTACTGGGAGTGCCTGCTAAAGGCTCCG
TTCCTCAAGACCATGTGCGTTCTGACCGCCACCATGTCGGCCATGGTGGT
GTGGAGCGAGCTTACCTTCTTCAGTCGCCACCCTGTGCTTTCCATATTCG
CCAACGTTATCTACGTGGCCAAGGAGAGCTACGACTTCTTTACTATTGAA
GTCTTCTCTATGGTTGTTCTATGCTACTTCTTCTACTGCACTTACTCCAC
GATCTTGAGGATACGCTTCCTTAATCTCTACTACCTGGCACCGCATCACC
AGACCAACGAGCACAGTCTGATCTTCAGCGGCATGCTGCTGTGCCGTCTG
ACACCACCCATGTGCCTCAACTTCCTGGGTCTCATCCATATGGACACACA
CATTATTCCCAACCGCATTATGGAGACGGTGTACACGCAGATCATGGGCC
ACATGGATGTTATTGGCATCATCTCGAACGGCTTCAATATCTACTTCCCA
ATGTGTATGCTGGCCTTCTGTCTGGCCACTTGGTTTAGCCTCGGCAGTCG
GGCACTGAATGCTCTCGGCTTCCAGCAGTTCCTGCAAAACGAAACTATTG
CTACCGAACTGGTGCAGGAGGGAAAGGATCTTATAGCGCGGGAAAAGCGC
CGCCGCCAGCGTGCCGAGGAGGCGATGGCCAGACGCCGTGACTTCAACCG
AACCGATCAGGTTCTGGGCAGCGATTACTTGAGCAAATACCGGAGTGGTG
GACCCGGTGGACTAACCAGTAGTCGCACGCCCGCCGACGGGCTGCTGCGC
GATGGCGACGGCAGCTTTGACTATGCGGCAGTGGCTTCTTCCTCTGCACT
GGGCGTACCGCGATCCCTGTCGGAGGAGATCAACGACCGTTTCGGTGTGA
GCACTCAGGTGCAGGTGGGATTCCGAGACCCCGACTACGAGGCGGAGACA
GATGGTCGAATTGTCGGCCCACCACCCCGAGGACTCTTCGACGATGTCGC
AAGCTTTCTAGACCAT
BO33159.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:14:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8135-RA | 2085 | CG8135-PA | 1..2082 | 17..2098 | 10410 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:14:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42511-RA | 2767 | CG42511-RA | 535..2616 | 17..2098 | 10410 | 100 | Plus |
| CG8135-RA | 2767 | CG8135-RA | 535..2616 | 17..2098 | 10410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:14:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9405735..9407061 | 187..1513 | 6635 | 100 | Plus |
| 3R | 32079331 | 3R | 9407112..9407706 | 1504..2098 | 2930 | 99.5 | Plus |
| 3R | 32079331 | 3R | 9404919..9405089 | 17..187 | 855 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:14:49 has no hits.
BO33159.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-18 16:29:57 Download gff for
BO33159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42511-RA | 545..2626 | 17..2100 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:43 Download gff for
BO33159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8135-RA | 535..2616 | 17..2100 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:24:16 Download gff for
BO33159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8135-RA | 535..2616 | 17..2100 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:24:16 Download gff for
BO33159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9404919..9405089 | 17..187 | 100 | -> | Plus |
| 3R | 9405736..9407061 | 188..1513 | 100 | -> | Plus |
| 3R | 9407122..9407706 | 1514..2100 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:43 Download gff for
BO33159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5230641..5230811 | 17..187 | 100 | -> | Plus |
| arm_3R | 5231458..5232783 | 188..1513 | 100 | -> | Plus |
| arm_3R | 5232844..5233428 | 1514..2100 | 99 | | Plus |
BO33159.pep Sequence
Translation from 16 to 2116
> BO33159.pep
MAYLLSFGIVAALFLASISLYRYGNIPRQHILVTLSVLTAWCFSFLIVFT
IPLDVTSTLYRQCVEEHRPTPAPNVTNTSSATVGPPPQCQEPWGMVPASV
FPNLWRIIYWSSQFLTWLIMPLMQSYLKAGDFTVKGKLKSALIENAIYYG
SYLFICGVLLIYIAVKGESLDWQKLKAIASSASNTWGLFLLILLLGYALV
EVPRSLWNNAKPGFALQYAYFKAAKLSTEKAEAEEHVDDILESLQGLSRV
IPNNHELRPCLETILRKVPIELQERASRNFARTGGSGMGATSSTILPSEK
ALVRIHKQVIKSLQTLQRTEALWSVQVQTVLHLEDVAKNIHSSDRRFKSE
FPRQRTQLERICYSASLQWYWECLLKAPFLKTMCVLTATMSAMVVWSELT
FFSRHPVLSIFANVIYVAKESYDFFTIEVFSMVVLCYFFYCTYSTILRIR
FLNLYYLAPHHQTNEHSLIFSGMLLCRLTPPMCLNFLGLIHMDTHIIPNR
IMETVYTQIMGHMDVIGIISNGFNIYFPMCMLAFCLATWFSLGSRALNAL
GFQQFLQNETIATELVQEGKDLIAREKRRRQRAEEAMARRRDFNRTDQVL
GSDYLSKYRSGGPGGLTSSRTPADGLLRDGDGSFDYAAVASSSALGVPRS
LSEEINDRFGVSTQVQVGFRDPDYEAETDGRIVGPPPRGLFDDVASFLDH
BO33159.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:37:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8135-PA | 694 | CG8135-PA | 1..694 | 1..694 | 3612 | 100 | Plus |
