Clone BO33160 Report

Search the DGRC for BO33160

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:331
Well:60
Vector:pDNR-Dual
Associated Gene/TranscriptGycalpha99B-RA
Protein status:BO33160.pep: Imported from assembly
Sequenced Size:2062

Clone Sequence Records

BO33160.complete Sequence

2062 bp assembled on 2012-09-18

GenBank Submission: KX796459

> BO33160.complete
GAAGTTATCAGTCGACATGGCGTGTCCTTTCTTCAGGCGTGCGGACTCGC
TGACACGCCAGCCCTCGGTCATCGCCGAGCCTGGTGGCCACTGGGCGCTC
GAGGACGAGGAGCTCTCGGACGACGCCCTGACCCTCACCCACCTCCAGAT
GGCCATCCAGCTGCTGACGGCGCCGTCGAACGAGGATCTCAACACGGCTG
TAACGTCTTTGGTGGCCAAGTACCGCCAGAACTGGCCCAATATCCACAAG
CTCAAACTGGATCCGCAAACCTTCAAGAGCTGTGCCAACTATGACTACTT
GGCGGACATCCAGGAGCTGCTGCTGAAGATGGACGAGGCCAGCGCCAGCG
AGATTCTGGTGCTGCTCGGCGAGGAGCTGATCACCTGCTGCTGCACAGGT
ATCATTGAAAGAGCCTTCCGCTGCCTGGGCACCGATCTGCAGGAATTCCT
GGGCTCCCTCGATGGCGTTTACGATGTGCTGAAGCTGCAGGAGGAGGACG
TCACCGATACCGGATTCGTGTGTGCCGGCGAGGGCGAGCTGATCTTCACC
TCGGAGCGCCCGGTCATTGCCTGGTTGCTCCTGGGCTCCCTGAAGGCGCT
CACCCGCATGCTCTACAAGGTGGACGTGAACATCAAGATCGAGCCCGTGG
AGGGCGATGCCCGGCGGTATCGCTACCTCTTCTCGCTGGTCAAGGACAAC
TCCCAGACCATGCTGATGGGTCGTCCCACTTCCGTGAGCAAAACCATCCC
GGAAACGGTGCAGCGGAGCAACTCGAGCAACGCCTCCGACCTGCAAATGA
ACTCGTCCAGCTTCTGCAAGATGTTTCCCTGGCACTTCATCATGAACGAG
CAGCTGGAACTGGTGCAGTTGGGCAGGGGATTCAGCAAATTGTACAAGCC
CTACATGGCGGACTTTGGTTGCCAGGCGACCACCTACTTTGATTTCAAAC
GACCCAAGGGATTGACCATGAAATTCCGGGACATCGTGAGGCGCACCTAC
ACGCCTTTCCTGATCGGTTTGAATAATCCGCCGGGCGCTGTGGATTTCCC
GGCCATTGGACTGGAGATCAAGGGACAGATGGTGCACTGTCCCGAGTCCA
ATTCGTTGCTCTTCATTGGATCCCCCTTCCTGGACGGCCTGGATGGGTTG
ACCTGCAACGGACTCTTCATCTCGGACATACCGCTGCACGACGCCACCAG
GGAGGTGATCCTGGTGGGCGAACAGGCTCGGGCCCAGGATGGACTGCGCC
GGCGCATGGACAAGATCAAGAACAGCATTGAGGAGGCCAACTCGGCGGTG
ACCAAGGAGCGGAAGAAGAACGTCAGTCTGCTGCACCTCATCTTTCCCGC
GGAGATCGCCGAGAAGCTTTGGCTGGGCTCCTCCATTGACGCCAAGACGT
ATCCCGATGTTACGATCCTGTTCAGCGACATCGTTGGCTTCACTAGCATC
TGCTCGCGGGCCACTCCCTTCATGGTGATCAGCATGCTGGAGGGGCTGTA
CAAGGACTTCGACGAGTTCTGCGACTTCTTCGACGTGTACAAGGTGGAGA
CCATCGGGGATGCCTACTGCGTGGCCAGTGGACTCCACCGAGCCTCCATC
TACGACGCCCACAAGGTTGCCTGGATGGCCCTGAAGATGATCGACGCCTG
CTCGAAGCACATTACCCACGACGGCGAGCAAATTAAAATGAGGATCGGCC
TGCACACGGGCACTGTCTTGGCGGGAGTGGTGGGCAGGAAGATGCCCAGG
TATTGCCTCTTCGGGCACAGCGTCACCATCGCCAACAAGTTCGAGTCGGG
CAGCGAGGCGCTGAAGATTAATGTTAGCCCAACCACCAAGGATTGGCTGA
CCAAGCACGAGGGCTTTGAGTTTGAGCTGCAGCCGCGGGATCCATCGTTC
CTGCCCAAGGAATTCCCCAATCCCGGCGGCACCGAGACCTGCTACTTCCT
GGAGAGCTTCCGCAACCCGGCTTTGGACAGCGAGCTGCCGCTGGTGGAGC
ACATCAATGTGTCCATGAAGACCATATCCGAGGGCGGCGATGCCGCAAGC
TTTCTAGACCAT

BO33160.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:14:54
Subject Length Description Subject Range Query Range Score Percent Strand
Gycalpha99B-RA 2031 CG1912-PA 1..2028 17..2044 10140 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:14:54
Subject Length Description Subject Range Query Range Score Percent Strand
Gycalpha99B-RA 2354 CG1912-RA 176..2207 13..2044 10160 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:14:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29683997..29685347 492..1842 6755 100 Plus
3R 32079331 3R 29683698..29683939 253..494 1210 100 Plus
3R 32079331 3R 29683398..29683637 13..252 1200 100 Plus
3R 32079331 3R 29685410..29685611 1843..2044 1010 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:14:53 has no hits.

BO33160.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-18 16:29:57 Download gff for BO33160.complete
Subject Subject Range Query Range Percent Splice Strand
Gycalpha99B-RA 181..2208 17..2046 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:46 Download gff for BO33160.complete
Subject Subject Range Query Range Percent Splice Strand
Gycalpha99B-RA 180..2207 17..2046 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:24:17 Download gff for BO33160.complete
Subject Subject Range Query Range Percent Splice Strand
Gycalpha99B-RA 180..2207 17..2046 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:24:17 Download gff for BO33160.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29683402..29683637 17..252 100 -> Plus
3R 29683698..29683938 253..493 100 -> Plus
3R 29683999..29685347 494..1842 100 -> Plus
3R 29685410..29685611 1843..2046 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:46 Download gff for BO33160.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25509124..25509359 17..252 100 -> Plus
arm_3R 25509420..25509660 253..493 100 -> Plus
arm_3R 25509721..25511069 494..1842 100 -> Plus
arm_3R 25511132..25511333 1843..2046 99   Plus

BO33160.pep Sequence

Translation from 16 to 2062

> BO33160.pep
MACPFFRRADSLTRQPSVIAEPGGHWALEDEELSDDALTLTHLQMAIQLL
TAPSNEDLNTAVTSLVAKYRQNWPNIHKLKLDPQTFKSCANYDYLADIQE
LLLKMDEASASEILVLLGEELITCCCTGIIERAFRCLGTDLQEFLGSLDG
VYDVLKLQEEDVTDTGFVCAGEGELIFTSERPVIAWLLLGSLKALTRMLY
KVDVNIKIEPVEGDARRYRYLFSLVKDNSQTMLMGRPTSVSKTIPETVQR
SNSSNASDLQMNSSSFCKMFPWHFIMNEQLELVQLGRGFSKLYKPYMADF
GCQATTYFDFKRPKGLTMKFRDIVRRTYTPFLIGLNNPPGAVDFPAIGLE
IKGQMVHCPESNSLLFIGSPFLDGLDGLTCNGLFISDIPLHDATREVILV
GEQARAQDGLRRRMDKIKNSIEEANSAVTKERKKNVSLLHLIFPAEIAEK
LWLGSSIDAKTYPDVTILFSDIVGFTSICSRATPFMVISMLEGLYKDFDE
FCDFFDVYKVETIGDAYCVASGLHRASIYDAHKVAWMALKMIDACSKHIT
HDGEQIKMRIGLHTGTVLAGVVGRKMPRYCLFGHSVTIANKFESGSEALK
INVSPTTKDWLTKHEGFEFELQPRDPSFLPKEFPNPGGTETCYFLESFRN
PALDSELPLVEHINVSMKTISEGGDAASFLDH

BO33160.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:37:30
Subject Length Description Subject Range Query Range Score Percent Strand
Gycalpha99B-PA 676 CG1912-PA 1..676 1..676 3537 100 Plus
Gyc88E-PF 1090 CG4154-PF 83..564 131..608 586 30.8 Plus
Gyc88E-PE 1097 CG4154-PE 83..564 131..608 586 30.8 Plus
Gyc88E-PD 1097 CG4154-PD 83..564 131..608 586 30.8 Plus
Gycbeta100B-PA 787 CG1470-PA 328..714 261..645 526 32.2 Plus