BO33164.complete Sequence
856 bp assembled on 2012-08-22
GenBank Submission: KX797551
> BO33164.complete
GAAGTTATCAGTCGACATGATATGCCGCCTGTGCCTGGACGATGCTGAGC
ACAGTGTGCCAATCTTTGACCAGGATGACTCCGGCGATCAGCCAGTGCCC
TCCAATCTAGCGGAGCTAATTGAGAAACACCTGCAGTTGGTGCTCCTGCC
CAACGATGGGGTGTCCAAGAGCCTCTGCACCCAGTGCTGGCAGCAGTTGG
CCGACTTCGAGCAGTTCTGCGCCATGGTGATGAAGAAACAATTGGGCCTG
CAGCAACTGAAGATGGAGCCGTTCTCCGAGGACGAGGATGCGGACACTAA
GGCGCAGATCCTGTGCGAACCGGAGATCGATGTGAGTCCCGCGGCCGCCG
ACAACGAAGAGTGCAACGAGATCGACGGCGATGCCAGCAGCAACAGCAGA
AGCAGTAGCATTCGCACCACATCGCTACGAGAAATGCGCCTGCCGTCGCC
CATTAGACGCCGTATGCGTCTACCCCGGGCAGTCACAGCACCCAAAACTC
AGGCTGTCAAGGCCAAGGCCAGGACGAAGACCCACAAGGCCGAGGCGGAC
GAGGATGAGGATGCCGAAGGCGAGGGCGATCCAGAGAGCCGCAGCAGCAA
TAGCCGCGAAATGGACAGCTATATCGCTCTGCACGGTCGTTTGGAGTGCT
GCATTTGCGGCGGCGACGAACAGTTTCCCAATTTCGCCGAGATGAAGCGG
CACTTCCGGAATCATCACCAGTCCCTCGGTTATGTGGTCTGCTGCCAGCG
GCGCTACAAGAAGCGTGCCCTCTACGTGGACCACCTGCACATGCACAACG
ATCCGAATTACTTTAGGTACTTGACCAGCCCAGGCAATGCAAGCTTTCTA
GACCAT
BO33164.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:18:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11695-RB | 825 | CG11695-PB | 1..822 | 17..838 | 4110 | 100 | Plus |
| CG11695-RA | 1635 | CG11695-PA | 1..802 | 17..818 | 4010 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:18:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11695-RB | 1800 | CG11695-RB | 71..892 | 17..838 | 4110 | 100 | Plus |
| CG11695-RA | 1742 | CG11695-RA | 71..872 | 17..818 | 4010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:18:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11577144..11577840 | 142..838 | 3485 | 100 | Plus |
| X | 23542271 | X | 11576953..11577078 | 17..142 | 630 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 12:18:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1512..1564 | 358..410 | 112 | 67.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2273..2383 | 300..410 | 112 | 61.4 | Plus |
BO33164.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:08:04 Download gff for
BO33164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11695-RB | 71..892 | 17..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:16 Download gff for
BO33164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11695-RB | 71..892 | 17..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:01:32 Download gff for
BO33164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11695-RB | 71..892 | 17..840 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:01:32 Download gff for
BO33164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11576953..11577078 | 17..142 | 100 | -> | Plus |
| X | 11577145..11577840 | 143..840 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:16 Download gff for
BO33164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11470986..11471111 | 17..142 | 100 | -> | Plus |
| arm_X | 11471178..11471873 | 143..840 | 99 | | Plus |
BO33164.pep Sequence
Translation from 16 to 856
> BO33164.pep
MICRLCLDDAEHSVPIFDQDDSGDQPVPSNLAELIEKHLQLVLLPNDGVS
KSLCTQCWQQLADFEQFCAMVMKKQLGLQQLKMEPFSEDEDADTKAQILC
EPEIDVSPAAADNEECNEIDGDASSNSRSSSIRTTSLREMRLPSPIRRRM
RLPRAVTAPKTQAVKAKARTKTHKAEADEDEDAEGEGDPESRSSNSREMD
SYIALHGRLECCICGGDEQFPNFAEMKRHFRNHHQSLGYVVCCQRRYKKR
ALYVDHLHMHNDPNYFRYLTSPGNASFLDH
BO33164.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:23:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11695-PB | 274 | CG11695-PB | 1..274 | 1..274 | 1462 | 100 | Plus |
| CG11695-PA | 544 | CG11695-PA | 1..267 | 1..267 | 1423 | 100 | Plus |
| CG11696-PA | 664 | CG11696-PA | 1..355 | 1..266 | 454 | 35.3 | Plus |
| CG15073-PA | 580 | CG15073-PA | 1..293 | 1..267 | 225 | 23 | Plus |
| CG2889-PB | 581 | CG2889-PB | 1..329 | 1..266 | 220 | 26.3 | Plus |
