BO33169.complete Sequence
1375 bp assembled on 2012-08-22
GenBank Submission: KX794592
> BO33169.complete
GAAGTTATCAGTCGACATGTCTATGAAAGCCATCATCATCGGATGCCTGG
CCGTGCTGGTGACACTGGGTGCGGCCCTCGATGAACATCCTCATTTCTGC
ATTAAGACAGATCCCCTCCTTCTGTCGGAGATCGATCGACATGTGGTCAT
CCCCAGCGAGGAGGACCTACAGTGCCATATTAAGGCCACCACGTTGACCC
AAAACGAGAAGGCAAACCTCGTGGACACCCTGTGCGCAGATCATGGCTCC
ACCACAATCAGGCGAGATAACCATCACTTTTTTAGGCTGCGCAACGGAGA
ACTGACTGGAAGGGGAGTTCAGACGGAGGTGTGCGCCAACGGAGGTGATT
CGGTCCTGGCCTGGATTCCCTACCACACCGTGCTCAAGAACTATGCGGCC
GAGCTGAATCCCAAGGAGCGACTGACATACATTGCCAAGGCCACGAACGT
GGAGCGGGAGAAGACAGAGCTCTGTCACTTCCGACACACGGATCTTGTCA
ATGCGGTGTCCGACAATCTGTTCACCTGTGTGGTCATGATTTTTGGCGAT
AACTTTTATGGTCTTGAGGATAACATTAACGTACTGGTGGAACTGGAACC
TTTGGCATACCAGCTGAGGAACATTACTTACCTGCCGTGGCGCAATGTGA
CTAACAGCTACAAGATGCACCTGGGTGACAGTGTGCTCCGAAATCCCAGT
GGCGAACGTAAGCCCATTTACGGTAGCCTGAACTACGATTTTGTGGAGAA
GATCCTTGTGAACATGTCCAGTGTGTACCAGCATAGGAAGCTATCCAGGC
TGCCTCTGCTCTTCGAGCACCGGTCCTCTGTTCTCGAGTTGGACTTGTAT
GGTATGGGTGGCCTGGATGTTGCGGAAAAAGCCTATTTCGGACGAAGCAT
GGACCCCAGGAGCGAGGTGAAGGTGCAGGTGATTGGTCAATGGGTAGACC
AGCATCGGGAGTTCGACGCCGACATATACGAGTACTATGGCCATGGGCTG
AGACGCTATAAGGAAACTCTGACCGGGGCCCGGCTCACCTTCATCCGAAT
AGATTATACGGAGCCGGTTTTCATGGCTCCGGAGTCTAGCAACCTGGCCA
AGGCCTCGCTTTTCCGAGAGCCGAAGGTTGGCCAGATAAGGGAGGATCCA
TCGGGCAACTATACCGAGTGGGAGAACGCACAGGAAGAGGATTACGATGA
GGAAGGTCCAGGATTCTACTGCTGGTTTGTGATTACTTGTCTGCTTTTGG
CCCTCGCTATTATCCTGGGCATATACATTGTAGTAAGCGCTCACAACAGG
AGAACCAAGAAGCGCCACATGTACGAAGTGGCCAACACGAATGTGCCTCC
ACCCGCCGCAAGCTTTCTAGACCAT
BO33169.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:19:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15674-RB | 1338 | CG15674-PB | 1..1335 | 23..1357 | 6675 | 100 | Plus |
| CG15674-RA | 1338 | CG15674-PA | 1..1335 | 23..1357 | 6675 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:19:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15674-RB | 1620 | CG15674-RB | 85..1425 | 17..1357 | 6705 | 100 | Plus |
| CG15674-RA | 1809 | CG15674-RA | 274..1614 | 17..1357 | 6705 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:19:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21633367..21634167 | 557..1357 | 4005 | 100 | Plus |
| 2R | 25286936 | 2R | 21632963..21633309 | 210..556 | 1735 | 100 | Plus |
| 2R | 25286936 | 2R | 21632280..21632479 | 17..216 | 985 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:19:25 has no hits.
BO33169.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:08:07 Download gff for
BO33169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15674-RA | 1..1335 | 23..1359 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:27 Download gff for
BO33169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15674-RA | 274..1614 | 17..1359 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:01:53 Download gff for
BO33169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15674-RA | 274..1614 | 17..1359 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:01:53 Download gff for
BO33169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21633367..21634167 | 557..1359 | 99 | | Plus |
| 2R | 21632965..21633309 | 212..556 | 100 | -> | Plus |
| 2R | 21632280..21632474 | 17..211 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:27 Download gff for
BO33169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17519785..17519979 | 17..211 | 100 | -> | Plus |
| arm_2R | 17520470..17520814 | 212..556 | 100 | -> | Plus |
| arm_2R | 17520872..17521672 | 557..1359 | 99 | | Plus |
BO33169.pep Sequence
Translation from 16 to 1375
> BO33169.pep
MSMKAIIIGCLAVLVTLGAALDEHPHFCIKTDPLLLSEIDRHVVIPSEED
LQCHIKATTLTQNEKANLVDTLCADHGSTTIRRDNHHFFRLRNGELTGRG
VQTEVCANGGDSVLAWIPYHTVLKNYAAELNPKERLTYIAKATNVEREKT
ELCHFRHTDLVNAVSDNLFTCVVMIFGDNFYGLEDNINVLVELEPLAYQL
RNITYLPWRNVTNSYKMHLGDSVLRNPSGERKPIYGSLNYDFVEKILVNM
SSVYQHRKLSRLPLLFEHRSSVLELDLYGMGGLDVAEKAYFGRSMDPRSE
VKVQVIGQWVDQHREFDADIYEYYGHGLRRYKETLTGARLTFIRIDYTEP
VFMAPESSNLAKASLFREPKVGQIREDPSGNYTEWENAQEEDYDEEGPGF
YCWFVITCLLLALAIILGIYIVVSAHNRRTKKRHMYEVANTNVPPPAASF
LDH
BO33169.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:23:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15674-PB | 445 | CG15674-PB | 1..445 | 3..447 | 2359 | 100 | Plus |
| CG15674-PA | 445 | CG15674-PA | 1..445 | 3..447 | 2359 | 100 | Plus |
