BO33170.complete Sequence
679 bp assembled on 2012-08-22
GenBank Submission: KX794109
> BO33170.complete
GAAGTTATCAGTCGACATGGATATTGCCTTGCGTGGCACAAACAGAGCAT
CGTCAACATCAACGACTGGAACTGGTCTGCATCATGCTGTGTCATTGGGC
AACATTGAGGTCTCCACCAAGACCACCTACTCCAGCCACATGGATCGCAG
CTACGACTCCGAGGATGAACACACTGGTCGCCGAAGACTTCGCCATACGC
TGTCCACCGAGTTGCATCCTCACACTTCTGTTTACTCACGCGGAGATATT
CGGGAACAGTACTGCCTCACAGATCGCCAGTTGCACAGCATAGAGCAGCG
TCCTAGGCGAGAACGATTTTTTGGCTGCCTTTCGCGACGCGGTCAAACGC
AATCGGGCAGTTTTTTGGGCGGCTGTGTGGGTCGGCGGGTGCCCTCCGAT
GAGAATTTGGCCGCCTATGCTCCATTTGAAAAATATCCACGCTACCAGAA
CAGCTATACGGACACACACGAATTGGAAAGTTCCTATTTTCGCCGTCAAC
CGGCCTCGATTCTGAGTACTGGTAAATCGGGTGAAGCGGATCTGGGTGGA
CGCTACACCTGGATTGGCCAACAGCAGGTGACCAACAACAATCCCGACTA
CCAATCGGACCACAGGTATGGACCGCCTGGCAAGGCGATCGAAAGTCGAT
ACAAAAACAGAGCAAGCTTTCTAGACCAT
BO33170.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:17:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43707-RG | 5931 | CG43707-PG | 1..599 | 17..615 | 2995 | 100 | Plus |
CG43707-RF | 5946 | CG43707-PF | 1..599 | 17..615 | 2995 | 100 | Plus |
CG43707-RE | 6066 | CG43707-PE | 1..599 | 17..615 | 2995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:17:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43707-RD | 8194 | CG43707-RD | 643..1287 | 17..661 | 3225 | 100 | Plus |
CG43707-RG | 7617 | CG43707-RG | 643..1241 | 17..615 | 2995 | 100 | Plus |
CG43707-RF | 7922 | CG43707-RF | 643..1241 | 17..615 | 2995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:17:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3758980..3759200 | 441..661 | 1105 | 100 | Plus |
2L | 23513712 | 2L | 3758735..3758919 | 257..441 | 925 | 100 | Plus |
2L | 23513712 | 2L | 3758537..3758676 | 120..259 | 700 | 100 | Plus |
2L | 23513712 | 2L | 3757898..3757957 | 17..76 | 300 | 100 | Plus |
2L | 23513712 | 2L | 3758042..3758089 | 74..121 | 240 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:17:23 has no hits.
BO33170.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:08:02 Download gff for
BO33170.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31959-RB | 268..912 | 17..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:05 Download gff for
BO33170.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43707-RD | 643..1287 | 17..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:01:11 Download gff for
BO33170.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43707-RD | 643..1287 | 17..663 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:01:11 Download gff for
BO33170.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3757898..3757955 | 17..74 | 100 | -> | Plus |
2L | 3758043..3758089 | 75..121 | 100 | -> | Plus |
2L | 3758539..3758676 | 122..259 | 100 | -> | Plus |
2L | 3758738..3758919 | 260..441 | 100 | -> | Plus |
2L | 3758981..3759200 | 442..663 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:05 Download gff for
BO33170.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3757898..3757955 | 17..74 | 100 | -> | Plus |
arm_2L | 3758043..3758089 | 75..121 | 100 | -> | Plus |
arm_2L | 3758539..3758676 | 122..259 | 100 | -> | Plus |
arm_2L | 3758738..3758919 | 260..441 | 100 | -> | Plus |
arm_2L | 3758981..3759200 | 442..663 | 99 | | Plus |
BO33170.pep Sequence
Translation from 16 to 679
> BO33170.pep
MDIALRGTNRASSTSTTGTGLHHAVSLGNIEVSTKTTYSSHMDRSYDSED
EHTGRRRLRHTLSTELHPHTSVYSRGDIREQYCLTDRQLHSIEQRPRRER
FFGCLSRRGQTQSGSFLGGCVGRRVPSDENLAAYAPFEKYPRYQNSYTDT
HELESSYFRRQPASILSTGKSGEADLGGRYTWIGQQQVTNNNPDYQSDHR
YGPPGKAIESRYKNRASFLDH
BO33170.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:23:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43707-PG | 1976 | CG43707-PG | 1..199 | 1..199 | 1061 | 100 | Plus |
CG43707-PF | 1981 | CG43707-PF | 1..199 | 1..199 | 1061 | 100 | Plus |
CG43707-PI | 2007 | CG43707-PI | 1..199 | 1..199 | 1061 | 100 | Plus |
CG43707-PE | 2021 | CG43707-PE | 1..199 | 1..199 | 1061 | 100 | Plus |