Clone BO33177 Report

Search the DGRC for BO33177

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:331
Well:77
Vector:pDNR-Dual
Associated Gene/TranscriptFim-RD
Protein status:BO33177.pep: Imported from assembly
Sequenced Size:1957

Clone Sequence Records

BO33177.complete Sequence

1957 bp assembled on 2012-09-18

GenBank Submission: KX797456

> BO33177.complete
GAAGTTATCAGTCGACATGGCCGATATTCTCAACGTGGAGCAGCACCAAA
CGGTTCAGGAGTTCAAGCAGAATCTCGAGGAGCTCATTCCCAACTTGGAT
GCCAACAAAGATGGCTTCATCGATCTGCACGAGCTAAAGGATGCCCTCAA
CCAGGTGGGCTTCAAGCTGGCCGGCTACCAGGTGCGCGAAATGATTGACG
AGTACAAGGGCAAACAGCTGACTGCCTTCCAGGGCAAATTGAATCTGGAG
GAGTTCGAGGCACTGTGCCTGGACCTGAAGAGCAAGGATGTGGCCAGCAC
ATTCAAGACGGTCGTCTCCAAGAAGGAGAACTTGGAGACCCTGGGCGGCA
TGTCGAGCATTTCGTCGGAGGGCACCACCCATTCGGTGCGCCTCGAGGAG
CAGCTGGCCTTCTCCGACTGGATTAACTCGAATCTGGGCCACGACAAGGA
TCTGCAACATCTGCTGCCCATCGATAGCGAGGGCAAGCGCTTGTATCTGA
GCATCAAGGATGGTATTCTGCTGTGCAAAATTATCAACCACTCCTGCCCG
GACACAATCGATGAGCGTGCGATCAACAAGAAGAACCTCACCGTCTACCG
GGAGTTTGAGAACTTGACCCTGGCCTTGGTTTCCTCCCAGGCGATTGGAT
GCAACATCGTAAACATCGATGCCCACGATCTGGCCAAGGGCAAGCCACAT
CTGGTGCTGGGTCTTCTCTGGCAGATCATCCGCATCGGTCTGTTTAGCCA
CATCACCCTGGACAGCTGTCCGGGATTGGCTGGCCTACTCTTCGACAACG
AACGTCTCGAGGATCTGATGAAGATGTCGCCGGAGGCCATCCTTTTGCGT
TGGGTCAACCATCATTTGGAGCGAGCCGGCATCTCGAGGCGGTGCACCAA
CTTCCAGTCGGACATCGTCGATTCTGAGATCTATTCGCATTTGCTGAAGC
AAATTGCCGGCAATGATGCTGATGTCAATCTGGATGCCCTGCGGGAATCC
GATCTGCAGTCGCGCGCGGAGATCATGTTGCAGCAGGCCGCCAAGCTCAA
CTGCCGCAGCTTCCTCACGCCACAGGATGTCGTCAACGGAGTCTACAAAC
TCAATCTAGCCTTCGTGGCTAATCTGTTCAACAACCATCCAGGATTGGAC
AAGCCCGAGCAGATCGAGGGACTCGAGTCCATTGAGGAGACGCGCGAAGA
GAAGACCTACCGCAACTGGATGAACTCAATGGGCGTGGCACCGCACGTGA
ACTGGCTTTACTCCGATTTGGCCGACGGTCTGGTCATTTTCCAGCTGTTC
GACGTCATCAAGCCCGGTATTGTCAACTGGAGCCGTGTGCACAAGCGTTT
CAGCCCGCTGCGCAAGTTCATGGAAAAGCTGGAGAACTGCAACTATGCGG
TGGATCTGGGCAAGCAGCTCAAATTCTCGCTGGTCGGAATCGCAGGCCAG
GATCTAAACGATGGCAATGCCACGCTGACGTTGGCTCTCATCTGGCAGCT
TATGCGTGCCTACACCCTGTCCATTCTGTCCCGCTTGGCCAACACCGGCA
ACCCCATTATCGAGAAGGAGATCGTCCAGTGGGTGAATAACCGACTGTCG
GAGGCAGGCAAACAGTCGCAGCTGCGTAACTTCAACGATCCGGCCATCGC
CGATGGCAAGATCGTGATCGATCTGATCGATGCCATCAAGGAGGGCAGCA
TTAACTACGAGTTGGTGCGCACTAGCGGAACACAGGAGGATAACCTGGCC
AATGCCAAGTATGCCATCTCCATGGCCCGCAAGATCGGCGCCCGTGTCTA
CGCCCTGCCCGAGGACATCACCGAGGTGAAGCCGAAAATGGTGATGACCG
TTTTCGCCTGCATGATGGCCCTCGACTACGTGCCCAACATGGACAGTGTG
GACCAGAACAACCACAACAGCTCCGCCAACAACAGCAATGCAAGCTTTCT
AGACCAT

BO33177.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:15:59
Subject Length Description Subject Range Query Range Score Percent Strand
Fim-RD 1926 CG8649-PD 1..1923 17..1939 9555 99.8 Plus
Fim-RC 1851 CG8649-PC 4..1848 95..1939 9165 99.8 Plus
Fim-RA 1923 CG8649-PA 76..1920 95..1939 9165 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:16:00
Subject Length Description Subject Range Query Range Score Percent Strand
Fim-RD 3236 CG8649-RD 342..2264 17..1939 9555 99.8 Plus
Fim-RC 3269 CG8649-RC 453..2297 95..1939 9165 99.8 Plus
Fim-RA 3387 CG8649-RA 571..2415 95..1939 9165 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:15:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17287927..17289037 1205..95 5555 100 Minus
X 23542271 X 17287256..17287534 1484..1206 1350 98.9 Minus
X 23542271 X 17286936..17287191 1739..1484 1265 99.6 Minus
X 23542271 X 17286676..17286878 1939..1737 1015 100 Minus
X 23542271 X 17291251..17291328 94..17 390 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:15:59 has no hits.

BO33177.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-18 16:30:05 Download gff for BO33177.complete
Subject Subject Range Query Range Percent Splice Strand
Fim-RD 341..2263 17..1941 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:04 Download gff for BO33177.complete
Subject Subject Range Query Range Percent Splice Strand
Fim-RD 342..2264 17..1941 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:24:47 Download gff for BO33177.complete
Subject Subject Range Query Range Percent Splice Strand
Fim-RD 342..2264 17..1941 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:24:47 Download gff for BO33177.complete
Subject Subject Range Query Range Percent Splice Strand
X 17286674..17286876 1739..1941 99 <- Minus
X 17286937..17287190 1485..1738 99 <- Minus
X 17287256..17287534 1206..1484 98 <- Minus
X 17287927..17289037 95..1205 100 <- Minus
X 17291251..17291328 17..94 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:04 Download gff for BO33177.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17180970..17181223 1485..1738 99 <- Minus
arm_X 17180707..17180909 1739..1941 99 <- Minus
arm_X 17181289..17181567 1206..1484 98 <- Minus
arm_X 17181960..17183070 95..1205 100 <- Minus
arm_X 17185284..17185361 17..94 100   Minus

BO33177.pep Sequence

Translation from 16 to 1957

> BO33177.pep
MADILNVEQHQTVQEFKQNLEELIPNLDANKDGFIDLHELKDALNQVGFK
LAGYQVREMIDEYKGKQLTAFQGKLNLEEFEALCLDLKSKDVASTFKTVV
SKKENLETLGGMSSISSEGTTHSVRLEEQLAFSDWINSNLGHDKDLQHLL
PIDSEGKRLYLSIKDGILLCKIINHSCPDTIDERAINKKNLTVYREFENL
TLALVSSQAIGCNIVNIDAHDLAKGKPHLVLGLLWQIIRIGLFSHITLDS
CPGLAGLLFDNERLEDLMKMSPEAILLRWVNHHLERAGISRRCTNFQSDI
VDSEIYSHLLKQIAGNDADVNLDALRESDLQSRAEIMLQQAAKLNCRSFL
TPQDVVNGVYKLNLAFVANLFNNHPGLDKPEQIEGLESIEETREEKTYRN
WMNSMGVAPHVNWLYSDLADGLVIFQLFDVIKPGIVNWSRVHKRFSPLRK
FMEKLENCNYAVDLGKQLKFSLVGIAGQDLNDGNATLTLALIWQLMRAYT
LSILSRLANTGNPIIEKEIVQWVNNRLSEAGKQSQLRNFNDPAIADGKIV
IDLIDAIKEGSINYELVRTSGTQEDNLANAKYAISMARKIGARVYALPED
ITEVKPKMVMTVFACMMALDYVPNMDSVDQNNHNSSANNSNASFLDH

BO33177.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:37:59
Subject Length Description Subject Range Query Range Score Percent Strand
Fim-PD 641 CG8649-PD 1..641 1..641 3296 100 Plus
Fim-PA 640 CG8649-PA 16..640 17..641 3171 98.7 Plus
Fim-PC 616 CG8649-PC 2..616 27..641 3164 100 Plus