BO33177.complete Sequence
1957 bp assembled on 2012-09-18
GenBank Submission: KX797456
> BO33177.complete
GAAGTTATCAGTCGACATGGCCGATATTCTCAACGTGGAGCAGCACCAAA
CGGTTCAGGAGTTCAAGCAGAATCTCGAGGAGCTCATTCCCAACTTGGAT
GCCAACAAAGATGGCTTCATCGATCTGCACGAGCTAAAGGATGCCCTCAA
CCAGGTGGGCTTCAAGCTGGCCGGCTACCAGGTGCGCGAAATGATTGACG
AGTACAAGGGCAAACAGCTGACTGCCTTCCAGGGCAAATTGAATCTGGAG
GAGTTCGAGGCACTGTGCCTGGACCTGAAGAGCAAGGATGTGGCCAGCAC
ATTCAAGACGGTCGTCTCCAAGAAGGAGAACTTGGAGACCCTGGGCGGCA
TGTCGAGCATTTCGTCGGAGGGCACCACCCATTCGGTGCGCCTCGAGGAG
CAGCTGGCCTTCTCCGACTGGATTAACTCGAATCTGGGCCACGACAAGGA
TCTGCAACATCTGCTGCCCATCGATAGCGAGGGCAAGCGCTTGTATCTGA
GCATCAAGGATGGTATTCTGCTGTGCAAAATTATCAACCACTCCTGCCCG
GACACAATCGATGAGCGTGCGATCAACAAGAAGAACCTCACCGTCTACCG
GGAGTTTGAGAACTTGACCCTGGCCTTGGTTTCCTCCCAGGCGATTGGAT
GCAACATCGTAAACATCGATGCCCACGATCTGGCCAAGGGCAAGCCACAT
CTGGTGCTGGGTCTTCTCTGGCAGATCATCCGCATCGGTCTGTTTAGCCA
CATCACCCTGGACAGCTGTCCGGGATTGGCTGGCCTACTCTTCGACAACG
AACGTCTCGAGGATCTGATGAAGATGTCGCCGGAGGCCATCCTTTTGCGT
TGGGTCAACCATCATTTGGAGCGAGCCGGCATCTCGAGGCGGTGCACCAA
CTTCCAGTCGGACATCGTCGATTCTGAGATCTATTCGCATTTGCTGAAGC
AAATTGCCGGCAATGATGCTGATGTCAATCTGGATGCCCTGCGGGAATCC
GATCTGCAGTCGCGCGCGGAGATCATGTTGCAGCAGGCCGCCAAGCTCAA
CTGCCGCAGCTTCCTCACGCCACAGGATGTCGTCAACGGAGTCTACAAAC
TCAATCTAGCCTTCGTGGCTAATCTGTTCAACAACCATCCAGGATTGGAC
AAGCCCGAGCAGATCGAGGGACTCGAGTCCATTGAGGAGACGCGCGAAGA
GAAGACCTACCGCAACTGGATGAACTCAATGGGCGTGGCACCGCACGTGA
ACTGGCTTTACTCCGATTTGGCCGACGGTCTGGTCATTTTCCAGCTGTTC
GACGTCATCAAGCCCGGTATTGTCAACTGGAGCCGTGTGCACAAGCGTTT
CAGCCCGCTGCGCAAGTTCATGGAAAAGCTGGAGAACTGCAACTATGCGG
TGGATCTGGGCAAGCAGCTCAAATTCTCGCTGGTCGGAATCGCAGGCCAG
GATCTAAACGATGGCAATGCCACGCTGACGTTGGCTCTCATCTGGCAGCT
TATGCGTGCCTACACCCTGTCCATTCTGTCCCGCTTGGCCAACACCGGCA
ACCCCATTATCGAGAAGGAGATCGTCCAGTGGGTGAATAACCGACTGTCG
GAGGCAGGCAAACAGTCGCAGCTGCGTAACTTCAACGATCCGGCCATCGC
CGATGGCAAGATCGTGATCGATCTGATCGATGCCATCAAGGAGGGCAGCA
TTAACTACGAGTTGGTGCGCACTAGCGGAACACAGGAGGATAACCTGGCC
AATGCCAAGTATGCCATCTCCATGGCCCGCAAGATCGGCGCCCGTGTCTA
CGCCCTGCCCGAGGACATCACCGAGGTGAAGCCGAAAATGGTGATGACCG
TTTTCGCCTGCATGATGGCCCTCGACTACGTGCCCAACATGGACAGTGTG
GACCAGAACAACCACAACAGCTCCGCCAACAACAGCAATGCAAGCTTTCT
AGACCAT
BO33177.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:15:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fim-RD | 1926 | CG8649-PD | 1..1923 | 17..1939 | 9555 | 99.8 | Plus |
Fim-RC | 1851 | CG8649-PC | 4..1848 | 95..1939 | 9165 | 99.8 | Plus |
Fim-RA | 1923 | CG8649-PA | 76..1920 | 95..1939 | 9165 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:16:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fim-RD | 3236 | CG8649-RD | 342..2264 | 17..1939 | 9555 | 99.8 | Plus |
Fim-RC | 3269 | CG8649-RC | 453..2297 | 95..1939 | 9165 | 99.8 | Plus |
Fim-RA | 3387 | CG8649-RA | 571..2415 | 95..1939 | 9165 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:15:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17287927..17289037 | 1205..95 | 5555 | 100 | Minus |
X | 23542271 | X | 17287256..17287534 | 1484..1206 | 1350 | 98.9 | Minus |
X | 23542271 | X | 17286936..17287191 | 1739..1484 | 1265 | 99.6 | Minus |
X | 23542271 | X | 17286676..17286878 | 1939..1737 | 1015 | 100 | Minus |
X | 23542271 | X | 17291251..17291328 | 94..17 | 390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:15:59 has no hits.
BO33177.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-18 16:30:05 Download gff for
BO33177.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fim-RD | 341..2263 | 17..1941 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:04 Download gff for
BO33177.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fim-RD | 342..2264 | 17..1941 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:24:47 Download gff for
BO33177.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fim-RD | 342..2264 | 17..1941 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:24:47 Download gff for
BO33177.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17286674..17286876 | 1739..1941 | 99 | <- | Minus |
X | 17286937..17287190 | 1485..1738 | 99 | <- | Minus |
X | 17287256..17287534 | 1206..1484 | 98 | <- | Minus |
X | 17287927..17289037 | 95..1205 | 100 | <- | Minus |
X | 17291251..17291328 | 17..94 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:04 Download gff for
BO33177.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17180970..17181223 | 1485..1738 | 99 | <- | Minus |
arm_X | 17180707..17180909 | 1739..1941 | 99 | <- | Minus |
arm_X | 17181289..17181567 | 1206..1484 | 98 | <- | Minus |
arm_X | 17181960..17183070 | 95..1205 | 100 | <- | Minus |
arm_X | 17185284..17185361 | 17..94 | 100 | | Minus |
BO33177.pep Sequence
Translation from 16 to 1957
> BO33177.pep
MADILNVEQHQTVQEFKQNLEELIPNLDANKDGFIDLHELKDALNQVGFK
LAGYQVREMIDEYKGKQLTAFQGKLNLEEFEALCLDLKSKDVASTFKTVV
SKKENLETLGGMSSISSEGTTHSVRLEEQLAFSDWINSNLGHDKDLQHLL
PIDSEGKRLYLSIKDGILLCKIINHSCPDTIDERAINKKNLTVYREFENL
TLALVSSQAIGCNIVNIDAHDLAKGKPHLVLGLLWQIIRIGLFSHITLDS
CPGLAGLLFDNERLEDLMKMSPEAILLRWVNHHLERAGISRRCTNFQSDI
VDSEIYSHLLKQIAGNDADVNLDALRESDLQSRAEIMLQQAAKLNCRSFL
TPQDVVNGVYKLNLAFVANLFNNHPGLDKPEQIEGLESIEETREEKTYRN
WMNSMGVAPHVNWLYSDLADGLVIFQLFDVIKPGIVNWSRVHKRFSPLRK
FMEKLENCNYAVDLGKQLKFSLVGIAGQDLNDGNATLTLALIWQLMRAYT
LSILSRLANTGNPIIEKEIVQWVNNRLSEAGKQSQLRNFNDPAIADGKIV
IDLIDAIKEGSINYELVRTSGTQEDNLANAKYAISMARKIGARVYALPED
ITEVKPKMVMTVFACMMALDYVPNMDSVDQNNHNSSANNSNASFLDH
BO33177.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:37:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fim-PD | 641 | CG8649-PD | 1..641 | 1..641 | 3296 | 100 | Plus |
Fim-PA | 640 | CG8649-PA | 16..640 | 17..641 | 3171 | 98.7 | Plus |
Fim-PC | 616 | CG8649-PC | 2..616 | 27..641 | 3164 | 100 | Plus |