Clone BO33179 Report

Search the DGRC for BO33179

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:331
Well:79
Vector:pDNR-Dual
Associated Gene/TranscriptCG14696-RA
Protein status:BO33179.pep: Imported from assembly
Sequenced Size:1405

Clone Sequence Records

BO33179.complete Sequence

1405 bp assembled on 2012-08-22

GenBank Submission: KX799043

> BO33179.complete
GAAGTTATCAGTCGACATGAGCAGCAAGGTGAACTTCGTCTTCGACAGCA
ATCCTTTGGGGCTCTATCAAGCCGGTCAGCTTATCTCCGGCACGGCGGAA
CTGATTACGGAGCGCCCCAAGACGATTCGATCGATCTTTATAACCATAAA
TGGATACGGCGAGACGCGTTGGCAGGAAAGCGAGGAGCGAGTGGGAGAGG
ATGGGAAGACGACCAAGTCCCTGGTGACCCACACCACCACCGAGGTCTAC
TACAGCACTGACCAGCCGGTTTACGGCCAGGCCGGTGGCTCGCAGCTGGA
GTTGCCCACCGGCAAGTACGTCTTTCCCTTCCGGGCTACCATTCCGCCCA
ATGCACCCACCTCATTCAATGGTGCTCATGGTCAGATTAAGCACGAGGTT
ACCCTAACCATCGATCGCGCGGTTCGCTACAACAACACATTTAAGCAGTG
CTTCACGGTGATCCTGCCACATGATCTTAATAGGCGGCTCGAGTATAAGG
AACCCCTCCAACGCTTGGAGTCGAAGAGCTTCTGGTGGGGCTCCATTTTC
GGTGCCCACAAGCCGATGATCATGGACGTGAGCACCTCTTATTCTGCCTA
CGTCCCCGGCCAGAAGATTCATTTCCATCTGGTGTTGGACAACCAGTCGG
ATGTCCAATGTATGGACGTGAAGGTGCGTCTGATCAAGAACGTCTCATAT
AGAGCCAACTCATCGGGCGCAAAGGAGCAGTTGAAGGTAACCGAATCTCG
GGTGGCGGACAAGCACTGCGGTGAGGTGCTGAAGCACAACAAGGCCAAGT
TCGATGAGTTCCTCACGGTGCCGCCAACTACTCCATCCACGCAAAGCGAA
AAGGATCCCATTCGAGTTAGCTACACATTGCGATTCATCGCCAAGACCTT
CAAGCTGCACGGTGGTGGCGACTTGGTCATGGACTTTCCAATAACCATTG
GCACAGTGCCGCTGCTGGGAAGTGCTGATGACAAGGGGCCCGGGGCGGAG
AAGTCCCAGCCCAGTGGTGCCTCTCATCCAGGCTCACCCAACTTTCAGGA
GGACGTCAGCGATGAGCAATTCGAGTCCAACACCTTTAAGCCAAGATATC
CCGTCTATCCATTTGATGGGAAGCCTGGAACCAATGGCTCAAACGGGGCA
GCTAATTTTCCCAGTCTTTATCCCAAGGCAGAGGAGGCGCATCCTGCTAC
GCCTGTGAAATTCACACCAAATCCTGTGTCGCCAGCCGCACAAAAATCGC
CACCATATACGACCAACACACCTGTTGCTTCTCCGCCAGGCGGTAATTTT
GAGGTGCTTGGATTCAGTATACCACCAGACTATAAACCCACGCCTAGTGC
TCCAGCCGCCTCTTCCACTGGCGGCATTGGGTGGAAAGCAAGCTTTCTAG
ACCAT

BO33179.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:20:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG14696-RA 1374 CG14696-PA 1..1371 17..1387 6855 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:20:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG14696-RA 1642 CG14696-RA 168..1538 17..1387 6855 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:20:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10882955..10883489 1032..498 2675 100 Minus
3R 32079331 3R 10883546..10883914 500..132 1845 100 Minus
3R 32079331 3R 10882537..10882894 1387..1030 1790 100 Minus
3R 32079331 3R 10884720..10884834 131..17 575 100 Minus
Blast to na_te.dros performed on 2014-11-28 12:20:14 has no hits.

BO33179.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:08:10 Download gff for BO33179.complete
Subject Subject Range Query Range Percent Splice Strand
CG14696-RA 168..1538 17..1389 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:39 Download gff for BO33179.complete
Subject Subject Range Query Range Percent Splice Strand
CG14696-RA 168..1538 17..1389 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:02:09 Download gff for BO33179.complete
Subject Subject Range Query Range Percent Splice Strand
CG14696-RA 168..1538 17..1389 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:02:09 Download gff for BO33179.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10882535..10882892 1032..1389 99 <- Minus
3R 10882956..10883487 500..1031 100 <- Minus
3R 10883547..10883914 132..499 100 <- Minus
3R 10884720..10884834 17..131 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:39 Download gff for BO33179.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6708257..6708614 1032..1389 99 <- Minus
arm_3R 6708678..6709209 500..1031 100 <- Minus
arm_3R 6709269..6709636 132..499 100 <- Minus
arm_3R 6710442..6710556 17..131 100   Minus

BO33179.pep Sequence

Translation from 16 to 1405

> BO33179.pep
MSSKVNFVFDSNPLGLYQAGQLISGTAELITERPKTIRSIFITINGYGET
RWQESEERVGEDGKTTKSLVTHTTTEVYYSTDQPVYGQAGGSQLELPTGK
YVFPFRATIPPNAPTSFNGAHGQIKHEVTLTIDRAVRYNNTFKQCFTVIL
PHDLNRRLEYKEPLQRLESKSFWWGSIFGAHKPMIMDVSTSYSAYVPGQK
IHFHLVLDNQSDVQCMDVKVRLIKNVSYRANSSGAKEQLKVTESRVADKH
CGEVLKHNKAKFDEFLTVPPTTPSTQSEKDPIRVSYTLRFIAKTFKLHGG
GDLVMDFPITIGTVPLLGSADDKGPGAEKSQPSGASHPGSPNFQEDVSDE
QFESNTFKPRYPVYPFDGKPGTNGSNGAANFPSLYPKAEEAHPATPVKFT
PNPVSPAAQKSPPYTTNTPVASPPGGNFEVLGFSIPPDYKPTPSAPAASS
TGGIGWKASFLDH

BO33179.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:23:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14696-PA 457 CG14696-PA 1..457 1..457 2434 100 Plus
CG2993-PA 511 CG2993-PA 9..306 9..317 475 33.5 Plus
CG2993-PB 524 CG2993-PB 9..306 9..317 475 33.5 Plus
CG2993-PC 545 CG2993-PC 9..306 9..317 475 33.5 Plus
CG18748-PC 409 CG18748-PC 8..388 8..364 371 28.2 Plus