BO33183.complete Sequence
1867 bp assembled on 2012-09-19
GenBank Submission: KX795113
> BO33183.complete
GAAGTTATCAGTCGACATGGGACACCTGACGCGACGCAGCAGCCTAATGG
CCATAGTCCTGTGCCTGGTACTCAACACACAGCACCTGTCGGTGCATGGC
GATGCCTCGCACATTGAGTCCGCCGCCCTGCCACTCGAACACAGGGCCGG
CTACGGTCCACCGGCGCCCATTTACGGTGCGCCCCAGGGACCACTGAGCA
CCGGAGCCACCAACGATGTGTCCGAGGAGGCATGGCCCCTCGCCAGCACC
AACGACAGTCCGCAGATCAAGCACCTGCAGGTGCAGTGCGAGAAGACCCA
CATGCGGGTGAACATCGAGTTCGACCGACCTTTCTACGGCATGATCTTCT
CCAAGGGATTCTACAGTGATCCACACTGCGTGCACCTGAAGCCCGGCACC
GGCCACCTGAGCGCCACCTTTGAGATCTTCCTGAATAGCTGCGGCATGAC
CAGCTCGGCCAACCACAATGCCGCCGGCTATGGAGCGCCCACGCCATCGG
GCAGCTATGTGGAGAACACGATCATCATCCAGTACGATCCCTATGTGCAG
GAGGTGTGGGATCAGGCCAGGAAGCTGCGCTGCACCTGGTACGATTTCTA
CGAGAAGGCCGTCACCTTCAGGCCCTTCCAGGTGGACATGCTGCATGCGG
TGACCGCTAACTTCCTGGGCGACAACCTGCAGTGCTGGATGCAAATCCAG
GTGGGCAAGGGACCCTGGGCCTCCGAGGTTTCGGGCATTGTCAAGATCGG
ACAGACGATGACCATGGTGCTGGCCATCAAGGATGATGAAAACAAATTCG
ATATGCTAGTGCGCAACTGTGTGGCCCACGACGGCAAGCGGGCTCCCATC
CAGCTGGTGGATCAGAATGGCTGCGTTGTCAGGCCCAAGATCATGAGCAA
GTTCCAGAAGATCAAGAACTTCGGACCCTCCGCATCGGTGGTTAGCTTCG
CCTACTTCCAGGCCTTCAAGTTCCCCGACTCGATGAATGTGCACTTCCAG
TGCGTCATCCAGGTGTGCCGCTACAACTGTCCCGAGCCCAAGTGCGGTCC
CGGTTTGCCGGGTGGCGAGTACGGTCTGCCCCAGATTGGAGCCAACGGTC
TGTCCGAGGAGTATGGTCCCCCAGAGGCATATGAGCGCAACGATTTCGCC
CTGGGCGGGCCCGGAGTTCTGCCACCAGCAGCCTATCCTGATCCACGTCA
CCCTGCCTCCGATGCCACTGGAGCGTACTCTGAGAACCAACCGGATGTGG
TGCCCTCGCCCCAGGCTCAGACATCGGCGGCAGTGCCCACTGCTGACTCG
GGAACCGTTTCCGGACCTGCCAGCTCCCAGTCGCCACAGCCTCAGCCCAC
TGGCAGCAACGAACTGGGTCTGCCGCCACCACCACTGCCAGGACAGAGCG
GTCAGTACAGCACGGTGAAGCGCAAGGATGACCTGAGTGCCGGTGGCAAC
CTGGTTTCCTTGGGCGGACGCCCACGCTCCGTGGAGGGACTGGACGATCT
GCGCGGCGTGCGAAGGCGCAGAGACACCATGGACATTGTGGTGAAGCCAC
AGAGGATCTACAAGAGGAACGCGCAGGAGATGACCGATGTGAACACCAGC
CGAATTATCCAGGTGGTGGCGCCCGGAGACGTTAACTTTGCGCTGAACAG
CAATGCCAGCAACGAGACGGTGGTCATCCAGTCGGCCAGGTCCGCGGATG
CGGAGACCATCTGCATGTCGGTGCCCAGCTTTGTGGGCGGATTGGTGATG
CTGCTGCTCGTCCTGGCCGTCGCCTCTCTAGTCGCCGCCTTCCTCTTCGT
CCGCGTGCGTCACTTCGATCGCAAGGGAGCGGGCATGGCCTATGTGAACG
CAAGCTTTCTAGACCAT
BO33183.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:03:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dyl-RC | 1836 | CG15013-PC | 1..1833 | 17..1849 | 9165 | 100 | Plus |
| dyl-RA | 1836 | CG15013-PA | 1..1833 | 17..1849 | 9165 | 100 | Plus |
| dyl-RB | 1836 | CG15013-PB | 1..1833 | 17..1849 | 9165 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:03:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dyl-RC | 2778 | CG15013-RC | 425..2257 | 17..1849 | 9165 | 100 | Plus |
| dyl-RA | 2690 | CG15013-RA | 337..2169 | 17..1849 | 9165 | 100 | Plus |
| dyl-RB | 2890 | CG15013-RB | 537..2369 | 17..1849 | 9165 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:03:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4294525..4296296 | 1849..78 | 8860 | 100 | Minus |
| X | 23542271 | X | 11771523..11772048 | 1037..512 | 920 | 78.3 | Minus |
| 3L | 28110227 | 3L | 4298530..4298595 | 82..17 | 330 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:03:12 has no hits.
BO33183.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-19 11:11:49 Download gff for
BO33183.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dyl-RC | 424..2256 | 17..1851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:17 Download gff for
BO33183.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dyl-RB | 537..2369 | 17..1851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:56:09 Download gff for
BO33183.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dyl-RB | 537..2369 | 17..1851 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:56:09 Download gff for
BO33183.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4294523..4296291 | 83..1851 | 99 | <- | Minus |
| 3L | 4298530..4298595 | 17..82 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:17 Download gff for
BO33183.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4294523..4296291 | 83..1851 | 99 | <- | Minus |
| arm_3L | 4298530..4298595 | 17..82 | 100 | | Minus |
BO33183.pep Sequence
Translation from 16 to 1867
> BO33183.pep
MGHLTRRSSLMAIVLCLVLNTQHLSVHGDASHIESAALPLEHRAGYGPPA
PIYGAPQGPLSTGATNDVSEEAWPLASTNDSPQIKHLQVQCEKTHMRVNI
EFDRPFYGMIFSKGFYSDPHCVHLKPGTGHLSATFEIFLNSCGMTSSANH
NAAGYGAPTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVT
FRPFQVDMLHAVTANFLGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTM
VLAIKDDENKFDMLVRNCVAHDGKRAPIQLVDQNGCVVRPKIMSKFQKIK
NFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRYNCPEPKCGPGLPGG
EYGLPQIGANGLSEEYGPPEAYERNDFALGGPGVLPPAAYPDPRHPASDA
TGAYSENQPDVVPSPQAQTSAAVPTADSGTVSGPASSQSPQPQPTGSNEL
GLPPPPLPGQSGQYSTVKRKDDLSAGGNLVSLGGRPRSVEGLDDLRGVRR
RRDTMDIVVKPQRIYKRNAQEMTDVNTSRIIQVVAPGDVNFALNSNASNE
TVVIQSARSADAETICMSVPSFVGGLVMLLLVLAVASLVAAFLFVRVRHF
DRKGAGMAYVNASFLDH
BO33183.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:38:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dyl-PC | 611 | CG15013-PC | 1..611 | 1..611 | 3239 | 100 | Plus |
| dyl-PA | 611 | CG15013-PA | 1..611 | 1..611 | 3239 | 100 | Plus |
| dyl-PB | 611 | CG15013-PB | 1..611 | 1..611 | 3239 | 100 | Plus |
| dy-PA | 699 | CG9355-PA | 227..532 | 60..369 | 1031 | 63.3 | Plus |
| m-PA | 682 | CG9369-PA | 35..326 | 71..376 | 672 | 41.8 | Plus |
