BO33185.complete Sequence
3679 bp assembled on 2012-09-19
GenBank Submission: KX798440
> BO33185.complete
GAAGTTATCAGTCGACATGTTTAAAAAACTTAAGCCAGGTGAAAGTGAGG
AGGATGTCCTGCGAATGGCAGCAGAGTTCAATGCAGAGAGAGCGAAGGAT
CCCAATTTCCAGCCTGCAGCGGCTTTTGTGCGTATGGATAAAGCTCCTAA
AAAGTCCATGTTTGCGCAAAGACGGGAGCAGGCAAAATTGGGGCGTGTTA
CTTCTACTACGGAAAAAAACGAGGAGCAAATTCAACCAGTGCCCAAAGAA
ATCATCCCTCAGATTCCAACAAGTGTCCCAAAAGAACGTGGGTCGCATGT
CAGCCAAGTTTTGCTTGATGAAATCCAGGAAAACATCCTGGGCGATGTGA
AGGGCAGCAAGATGGATCCAAGTTCCCTAGGCAATGTGCTGGGCGAATTG
GTAGAAAGAACTGAAGGAACCAGGAGATCTGCATTTCCAGAAACTAAAAA
TGTTGACTCCAGTAAGCCGCTTAGCATTTTCGCCAAACAACTTTTAGGTG
CAAAGTCTTCAACTAAGGAAAAATCAAACAAAGTGTCGGATTTTCCAAGA
AATGATACAAGTTCCATAATAAAAGATGCTAAACTGGGAAAAGAACTGCA
TCAGGAAAACCTAAATGTACTCAAGCAAATGAATGAACAAGATATTTTGA
CAGAGAAAGAAAGATTGCTGGCTTCTTTGGATCCCTCGTTGATAGCTTTG
TTGTCCAAGAAACGTCAAACGACACCAAATTCCAAACCGCCCAATCCAAA
TTCACCTAAAGTAATAGAAGCACCACCCATGCCCGCACAGTCTACAAGAG
CCCAAGATCCACAAATTTCTTCTTTAACCGATGGAAATCCAGCAATTGAG
CTATTGCAAGAGAGCGATAAAGGAAATTGGCTTAATTTCAATCTAGTCGA
GGAGCATAAATTGGCGTGGATGCGGGACATTCCCGCCAAGATAAGTGAAT
TGAAGCCTGGAGAGCAGTTCAATGCTCGCTTTGATTGGAAAGGTGTGCTA
CTGCCACACACGCTCAAGGATCAGGATGCATCGAAACAAATCGATGAGCG
TGAACTTTATTTACATGGCGAGGAGGCAGATCGTCCCGGCTACGCACTAC
AAGAGCTATTTCGATTAGCCAGATCCACCGTCTTACAGCAAAGATTATCT
GCCTTTGGAGCCATAGCTGGGATCTTTAGCATCTATAACCAGGGATTCTA
TGATCAAGTCTTGTCTCTACCTATATCAAAAATATTCTTTTTGCTGCGCT
TTGGGCTCGATGACAATGCACCTGCACAACTTGAGGTTGTGAGCCGAGCA
TTATCAAACCTGTTCTATAACGAAACCGACGAAGTGCTTCTCGATCACGT
TCATGACAATGCCTACTGTCATTGGCAACCAACACTAGAGGTTTTGGGGA
ACGGCAGTGATGGCAATGGGGAAGATACAGATACCAACTCCATAGCATTC
CTGCAGCGTTACATGAAGCTACTGACCACCAGTAAATCTGTGCGTGCAGA
AGTGGATGAAGATGAATCGGAAAGTCGCACGTCAATGGATGACTTTCAAC
TGGCTGAAACAGATCTCATGGACTGCCTGCTAAGAACAAATATATTGCAA
AGGATTCGATTCATCTTGGTCTCTGTGAAACCAGATAATAGCACAGTGGA
GTCCTGTCTGAAATTACTTATAAGGATAGCTCGTACAAGTACCAAAGTGG
CTCGTCAGTTGGCCAATGAGAGCCATCTTATAGATACACTCTTTAAACAT
TTTCTACCCTCTTCGAGTGGAAGCAATCAGTTCTATGGCCAGCCGCAAGT
TCTATTTCTAAAACTAATCCGAGTGTTGATTTGCCACCACCTTGATATAG
CTAAGGGTATTTCCAAAGGAGTCCTCATTACGCGACTTCAACAATACCTG
TTCCTTCAAGACAATAAGGTCCAGATGGTGCGCATTCAGATCGAGGCACT
GCGCATCCTGCGCTGTTTGCTGCTCTTGGGAATCGTGGATCGGGATATAT
TTAGGCAGTTCCTGCCCGCGCTGCGACAGCTACTGGACTGGCATGGCAAT
CACTGCGCTTTCGATGGAGTGGGAGGATCCGGGCTGGTGCGGCAACACGC
AGCCGCCCTGCTGGTCGCACTGGTGGCCAGTGGCGAGAGCGGAGCATGCG
ATGTCGAGGGACAGAAGCTGCTCGTGGAGCCGCTTAACAACTGCTGCTGC
GGCTGGATGCATGCTGCTTCCCGCGTCGCGAAGATCAAAGATTTTAGCCA
GATGACGCTTCTGAGCGCAGCTCTATACGCCGTAGGCTGGTTTTCTCGGA
ACAGCTTGTTGGGAACGACCAGTTTCCTGCCCTTTCTGCGCAGCATCCTT
CCGAAATTTGTGCAGTCCAGCGGATTTATAGCTTGCGTACATGACCTAGT
CAAGGGCTCCATAATGCTGAGACGCCCCATTGATCGGCGACACGTGCATG
CGCCGTTGCCTAACGTGGGCGCAGTGCTGATGCACGACTACGGGCCGCAG
CTGGTTGTCAGTGAGACGTATCCGGTGCACCTGTTGAGTAACCTGTGGGC
CCTGCTCGCCATTTCGCTGGACAGCGGTGAGAAGCCATTATTCGAGGCGC
TTATACAACCAGCAGTGCTCGAACCTCTGGCCGAATATTTACGCCAGCTG
AGCACACAGCTGAATCGCGTCCTGGCCACCAACTTCTTTGCCCGCAGCGA
GCTGAGGTTCATCCATCAGCTGCTTACAACAGATGGAATCGAGATCTATC
TGAAGCGACAGCAGATGCTGCAGTTGGTATACAATTACCTATGCTGCCTG
TCCACTGCCCATGCCACACAGATCAAGAGCATCTTTGAGCGCTTCATTTT
CAATGGCGACTTTGTTAAATTAGACGAATCTAGTCTGAAACTGCTGCAGC
AATCGTGTCTGGAGATGGTGTATCCTCACATTATAGCTGACAACTCAGAG
CCGTCGCTGTCCTTGAGCTACACACAAGCGCCCATCTTGCCCACGGACTG
GCCCTTCTTTCAGCTCCGGGTTATCCTCAGCAATTACTTGCAAAATGTGC
AGCAGCGTCCAGCGGCTATACACTCAGAAAACCAGGTGGTGCTCATGACG
TTGACTTTCGTTCGGCAGTTGGAACGAGAGGGACTGCAGATTGTTAGCCC
GCTGGAAAAGCTTATGTATCTGATGATTGCCTTCATGGGCCCGGACTCAC
AGTTCCTGGCTCCGGATTTGCATGAGCTGCTTCGTGATTGCCTGATGGAT
TTCTACAGGGAGAATGCAGCCCATGAATTTGACTTTGATGCAGAACTTGT
GGATAAGGCGAGATTTGAACCGCTTTACTACCTGTTTGTCGAACACTTTG
AGGCGGCCAGCTATGGTGATGAACTGTTTAGTTCTCTGGTGCTGGTGCCT
CTGGCACAGAAATATGATAATAAGTGGCGAAGGCGTCTTTGGTCGGAGCA
TGTTCAGGCTGTGCGTTTCATAAACTGTGATGAATCTATGCTAATGGGAG
GGCTCTTTGCGTATTTGGAGCCCGTGGAGGAGGAGCCTTCGTTGGTGAAG
CTGTACGGTGATGCATTGGCACAAAAGATGGTTCGTCCTGGAAGCATTGC
CTATCGGATAGCCCAGCACCACTTTAACCACTCGAAGTCGGTGCACAAAG
CCACATTGTTTGCAAGCTTTCTAGACCAT
BO33185.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:03:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32104-RB | 3648 | CG32104-PB | 1..3645 | 17..3661 | 18225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:03:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32104-RB | 3768 | CG32104-RB | 56..3700 | 17..3661 | 18225 | 100 | Plus |
Obp69a-RA | 546 | CG10436-RA | 493..546 | 2005..1952 | 270 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:03:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12395041..12395579 | 2939..2401 | 2695 | 100 | Minus |
3L | 28110227 | 3L | 12397420..12397907 | 1608..1121 | 2440 | 100 | Minus |
3L | 28110227 | 3L | 12397972..12398414 | 1122..680 | 2215 | 100 | Minus |
3L | 28110227 | 3L | 12394105..12394524 | 3494..3075 | 2085 | 99.8 | Minus |
3L | 28110227 | 3L | 12397054..12397366 | 1920..1608 | 1565 | 100 | Minus |
3L | 28110227 | 3L | 12398758..12399069 | 453..142 | 1560 | 100 | Minus |
3L | 28110227 | 3L | 12395855..12396095 | 2242..2002 | 1205 | 100 | Minus |
3L | 28110227 | 3L | 12398474..12398702 | 680..452 | 1145 | 100 | Minus |
3L | 28110227 | 3L | 12393872..12394043 | 3661..3490 | 860 | 100 | Minus |
3L | 28110227 | 3L | 12395635..12395792 | 2400..2243 | 790 | 100 | Minus |
3L | 28110227 | 3L | 12394602..12394740 | 3077..2939 | 695 | 100 | Minus |
3L | 28110227 | 3L | 12399141..12399267 | 143..17 | 635 | 100 | Minus |
3L | 28110227 | 3L | 12396904..12396992 | 2005..1917 | 445 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:03:24 has no hits.
BO33185.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-19 11:11:51 Download gff for
BO33185.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32104-RB | 31..3669 | 23..3663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:22 Download gff for
BO33185.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32104-RB | 62..3700 | 23..3663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:56:14 Download gff for
BO33185.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32104-RB | 62..3700 | 23..3663 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:56:14 Download gff for
BO33185.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12393869..12394042 | 3491..3663 | 98 | <- | Minus |
3L | 12394109..12394521 | 3078..3490 | 100 | <- | Minus |
3L | 12394602..12394740 | 2939..3077 | 100 | <- | Minus |
3L | 12395042..12395579 | 2401..2938 | 100 | <- | Minus |
3L | 12395635..12395792 | 2243..2400 | 100 | <- | Minus |
3L | 12395855..12396092 | 2005..2242 | 100 | <- | Minus |
3L | 12396905..12396990 | 1919..2004 | 100 | <- | Minus |
3L | 12397056..12397365 | 1609..1918 | 100 | <- | Minus |
3L | 12397420..12397905 | 1123..1608 | 100 | <- | Minus |
3L | 12397972..12398413 | 681..1122 | 100 | <- | Minus |
3L | 12398474..12398702 | 452..680 | 100 | <- | Minus |
3L | 12398760..12399067 | 144..451 | 100 | <- | Minus |
3L | 12399141..12399261 | 23..143 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:22 Download gff for
BO33185.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12386969..12387142 | 3491..3663 | 98 | <- | Minus |
arm_3L | 12387209..12387621 | 3078..3490 | 100 | <- | Minus |
arm_3L | 12387702..12387840 | 2939..3077 | 100 | <- | Minus |
arm_3L | 12388142..12388679 | 2401..2938 | 100 | <- | Minus |
arm_3L | 12388735..12388892 | 2243..2400 | 100 | <- | Minus |
arm_3L | 12388955..12389192 | 2005..2242 | 100 | <- | Minus |
arm_3L | 12390005..12390090 | 1919..2004 | 100 | <- | Minus |
arm_3L | 12390156..12390465 | 1609..1918 | 100 | <- | Minus |
arm_3L | 12390520..12391005 | 1123..1608 | 100 | <- | Minus |
arm_3L | 12391072..12391513 | 681..1122 | 100 | <- | Minus |
arm_3L | 12391574..12391802 | 452..680 | 100 | <- | Minus |
arm_3L | 12391860..12392167 | 144..451 | 100 | <- | Minus |
arm_3L | 12392241..12392361 | 23..143 | 100 | | Minus |
BO33185.pep Sequence
Translation from 16 to 3679
> BO33185.pep
MFKKLKPGESEEDVLRMAAEFNAERAKDPNFQPAAAFVRMDKAPKKSMFA
QRREQAKLGRVTSTTEKNEEQIQPVPKEIIPQIPTSVPKERGSHVSQVLL
DEIQENILGDVKGSKMDPSSLGNVLGELVERTEGTRRSAFPETKNVDSSK
PLSIFAKQLLGAKSSTKEKSNKVSDFPRNDTSSIIKDAKLGKELHQENLN
VLKQMNEQDILTEKERLLASLDPSLIALLSKKRQTTPNSKPPNPNSPKVI
EAPPMPAQSTRAQDPQISSLTDGNPAIELLQESDKGNWLNFNLVEEHKLA
WMRDIPAKISELKPGEQFNARFDWKGVLLPHTLKDQDASKQIDERELYLH
GEEADRPGYALQELFRLARSTVLQQRLSAFGAIAGIFSIYNQGFYDQVLS
LPISKIFFLLRFGLDDNAPAQLEVVSRALSNLFYNETDEVLLDHVHDNAY
CHWQPTLEVLGNGSDGNGEDTDTNSIAFLQRYMKLLTTSKSVRAEVDEDE
SESRTSMDDFQLAETDLMDCLLRTNILQRIRFILVSVKPDNSTVESCLKL
LIRIARTSTKVARQLANESHLIDTLFKHFLPSSSGSNQFYGQPQVLFLKL
IRVLICHHLDIAKGISKGVLITRLQQYLFLQDNKVQMVRIQIEALRILRC
LLLLGIVDRDIFRQFLPALRQLLDWHGNHCAFDGVGGSGLVRQHAAALLV
ALVASGESGACDVEGQKLLVEPLNNCCCGWMHAASRVAKIKDFSQMTLLS
AALYAVGWFSRNSLLGTTSFLPFLRSILPKFVQSSGFIACVHDLVKGSIM
LRRPIDRRHVHAPLPNVGAVLMHDYGPQLVVSETYPVHLLSNLWALLAIS
LDSGEKPLFEALIQPAVLEPLAEYLRQLSTQLNRVLATNFFARSELRFIH
QLLTTDGIEIYLKRQQMLQLVYNYLCCLSTAHATQIKSIFERFIFNGDFV
KLDESSLKLLQQSCLEMVYPHIIADNSEPSLSLSYTQAPILPTDWPFFQL
RVILSNYLQNVQQRPAAIHSENQVVLMTLTFVRQLEREGLQIVSPLEKLM
YLMIAFMGPDSQFLAPDLHELLRDCLMDFYRENAAHEFDFDAELVDKARF
EPLYYLFVEHFEAASYGDELFSSLVLVPLAQKYDNKWRRRLWSEHVQAVR
FINCDESMLMGGLFAYLEPVEEEPSLVKLYGDALAQKMVRPGSIAYRIAQ
HHFNHSKSVHKATLFASFLDH
BO33185.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:38:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32104-PB | 1215 | CG32104-PB | 1..1215 | 1..1215 | 6225 | 100 | Plus |